RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 YTHDF2Q9Y5A9 579 aaKnown RBP4.23□□□□□ -1.73
VPS25-204ENST00000589577 LENEPQ9Y5L5 61 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 HLA-DRB4X5D2U9 266 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 IGKV2-40A0A087WW87 121 aaPredicted RBP4.22□□□□□ -1.73
VPS25-204ENST00000589577 A0A0J9YX75 114 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 KNCNA6PVL3 124 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 DIRC3C9JPN6 131 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 IGKV2D-40P01614 121 aaPredicted RBP4.22□□□□□ -1.73
VPS25-204ENST00000589577 IGKV3-20P01619 116 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 ATP5G3P48201 142 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 GNG4P50150 75 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 ZNF138P52744 262 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 EMP1P54849 157 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 TAS2R60P59551 318 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 FLI1Q01543 452 aaPredicted RBP4.22□□□□□ -1.73
VPS25-204ENST00000589577 IFITM2Q01629 132 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 ZNF674Q2M3X9 581 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 FAM74A3Q4VXF1 159 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 IGFL4Q6B9Z1 124 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 COMMD7Q86VX2 200 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 TMEM75Q8N9X5 138 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 C15orf53Q8NAA6 179 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 DEFB104AQ8WTQ1 72 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 TMEM208Q9BTX3 173 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 SLC35B3Q9H1N7 401 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 ZFP30Q9Y2G7 519 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 TNXBP22105 4242 aa4.22□□□□□ -1.73
VPS25-204ENST00000589577 TRAV8-2A0A0B4J237 113 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 TRBV7-9A0A0J9YWB2 115 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 SCO2A0A1W2PP80 73 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 ZNF727A8MUV8 499 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 ZNF705FA8MVS1 300 aaPredicted RBP4.21□□□□□ -1.74
VPS25-204ENST00000589577 NPIPB6E9PJ23 425 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 INSP01308 110 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 GPX1P07203 203 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 ZNF705DP0CH99 300 aaPredicted RBP4.21□□□□□ -1.74
VPS25-204ENST00000589577 ZNF705BP0CI00 300 aaPredicted RBP4.21□□□□□ -1.74
VPS25-204ENST00000589577 DNAH10OSP0CZ25 163 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 CDKN1BP46527 198 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 KRTAP10-4P60372 401 aaPredicted RBP4.21□□□□□ -1.74
VPS25-204ENST00000589577 GNG5P63218 68 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 CCL20P78556 96 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 SMUG1Q53HV7 270 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 FAM222AQ5U5X8 452 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 ZNF705AQ6ZN79 300 aaPredicted RBP4.21□□□□□ -1.74
VPS25-204ENST00000589577 C9orf47Q6ZRZ4 202 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 PRNTQ86SH4 94 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 BAGE2Q86Y30 109 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 C11orf52Q96A22 123 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 DAZAP1Q96EP5 407 aaKnown RBP4.21□□□□□ -1.74
VPS25-204ENST00000589577 SMIM12Q96EX1 92 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 CLUHP3Q96NS8 147 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 ODF3Q96PU9 254 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 SMIM7Q9BQ49 75 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 NIPSNAP3BQ9BS92 247 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 PSG8Q9UQ74 426 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 GOLT1BQ9Y3E0 138 aa4.21□□□□□ -1.74
VPS25-204ENST00000589577 XKRY2A2RUG3 117 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 F6UB75 175 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 H3BMM0 161 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 OXTP01178 125 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 PRB4P10163 310 aaPredicted RBP4.2□□□□□ -1.74
VPS25-204ENST00000589577 MGST1P10620 155 aaKnown RBP4.2□□□□□ -1.74
VPS25-204ENST00000589577 ASIPP42127 132 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 RPL35P42766 123 aaKnown RBP4.2□□□□□ -1.74
VPS25-204ENST00000589577 LINC00315P59091 139 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 TMEM183BQ1AE95 376 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 Q86TA4 180 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 C20orf173Q96LM9 149 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 NEU1Q99519 415 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 PARLQ9H300 379 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 Q9H8V8 135 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 ZNF492Q9P255 531 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 DNAH8Q96JB1 4490 aa4.2□□□□□ -1.74
VPS25-204ENST00000589577 TRAV8-1A0A0A6YYK1 113 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 TRAV34A0A0B4J273 112 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 TRAV21A0A0B4J279 112 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 TRBV6-1A0A0K0K1D8 114 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 C7orf71A4D174 169 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 LINC00862A6NCI5 91 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 C9JCJ5 164 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 F8W036 122 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 J3KRW8 73 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 SFTA3P0C7M3 94 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 PNRC1Q12796 327 aaPredicted RBP4.19□□□□□ -1.74
VPS25-204ENST00000589577 ERCC8Q13216 396 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 SPINK13Q1W4C9 94 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 TMEM241Q24JQ0 296 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 CENPWQ5EE01 88 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 TTC32Q5I0X7 151 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 FAM162BQ5T6X4 162 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 PRR27Q6MZM9 219 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 CCDC28AQ8IWP9 274 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 TMEM256Q8N2U0 113 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 C15orf54Q8N8G6 183 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 Q8TAT8 98 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 VGLL1Q99990 258 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 C20orf144Q9BQM9 153 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 AGPAT4-IT1Q9H0P7 198 aa4.19□□□□□ -1.74
VPS25-204ENST00000589577 XCL2Q9UBD3 114 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms