RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 LGALSLQ3ZCW2 172 aaPredicted RBP5.42□□□□□ -1.54
ATG4D-210ENST00000588972 C1orf194Q5T5A4 169 aa5.42□□□□□ -1.54
ATG4D-210ENST00000588972 C10orf113Q5VZT2 155 aa5.42□□□□□ -1.54
ATG4D-210ENST00000588972 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.42□□□□□ -1.54
ATG4D-210ENST00000588972 LINC00305Q7Z4B0 112 aa5.42□□□□□ -1.54
ATG4D-210ENST00000588972 SLC51BQ86UW2 128 aa5.42□□□□□ -1.54
ATG4D-210ENST00000588972 RPP25LQ8N5L8 163 aaKnown RBP5.42□□□□□ -1.54
ATG4D-210ENST00000588972 ATP5SQ99766 215 aa5.42□□□□□ -1.54
ATG4D-210ENST00000588972 RSG1Q9BU20 258 aa5.42□□□□□ -1.54
ATG4D-210ENST00000588972 PARD6GQ9BYG4 376 aaPredicted RBP5.42□□□□□ -1.54
ATG4D-210ENST00000588972 WDR61Q9GZS3 305 aaKnown RBP5.42□□□□□ -1.54
ATG4D-210ENST00000588972 GEMIN7Q9H840 131 aaKnown RBP5.42□□□□□ -1.54
ATG4D-210ENST00000588972 SLC39A9Q9NUM3 307 aa5.42□□□□□ -1.54
ATG4D-210ENST00000588972 RFNGQ9Y644 331 aa5.42□□□□□ -1.54
ATG4D-210ENST00000588972 AGRNO00468 2067 aa5.42□□□□□ -1.54
ATG4D-210ENST00000588972 TRAV5A0A0B4J249 113 aa5.41□□□□□ -1.54
ATG4D-210ENST00000588972 MPDU1O75352 247 aa5.41□□□□□ -1.54
ATG4D-210ENST00000588972 STAG3L3P0CL85 134 aa5.41□□□□□ -1.54
ATG4D-210ENST00000588972 GALR1P47211 349 aa5.41□□□□□ -1.54
ATG4D-210ENST00000588972 CXCL6P80162 114 aa5.41□□□□□ -1.54
ATG4D-210ENST00000588972 OR5I1Q13606 314 aa5.41□□□□□ -1.54
ATG4D-210ENST00000588972 DEFB135Q30KP9 77 aa5.41□□□□□ -1.54
ATG4D-210ENST00000588972 ACTL10Q5JWF8 245 aa5.41□□□□□ -1.54
ATG4D-210ENST00000588972 GDF5OSQ5U4N7 250 aa5.41□□□□□ -1.54
ATG4D-210ENST00000588972 EIF5AL1Q6IS14 154 aaKnown RBP5.41□□□□□ -1.54
ATG4D-210ENST00000588972 STOML3Q8TAV4 291 aa5.41□□□□□ -1.54
ATG4D-210ENST00000588972 RASL10AQ92737 203 aa5.41□□□□□ -1.54
ATG4D-210ENST00000588972 LINC00052Q96N35 136 aa5.41□□□□□ -1.54
ATG4D-210ENST00000588972 TRAV8-2A0A0B4J237 113 aa5.4□□□□□ -1.54
ATG4D-210ENST00000588972 F6UB75 175 aa5.4□□□□□ -1.54
ATG4D-210ENST00000588972 MRPS12O15235 138 aaKnown RBP5.4□□□□□ -1.54
ATG4D-210ENST00000588972 IFNA5P01569 189 aa5.4□□□□□ -1.54
ATG4D-210ENST00000588972 TPT1P13693 172 aaKnown RBP5.4□□□□□ -1.54
ATG4D-210ENST00000588972 HLA-DMBP28068 263 aa5.4□□□□□ -1.54
ATG4D-210ENST00000588972 PSMB3P49720 205 aa5.4□□□□□ -1.54
ATG4D-210ENST00000588972 NKX2-5P52952 324 aaPredicted RBP5.4□□□□□ -1.54
ATG4D-210ENST00000588972 APOC4P55056 127 aa5.4□□□□□ -1.54
ATG4D-210ENST00000588972 CMC4P56277 68 aaPredicted RBP5.4□□□□□ -1.54
ATG4D-210ENST00000588972 SNRPD3P62318 126 aaKnown RBP5.4□□□□□ -1.54
ATG4D-210ENST00000588972 SPATA31B1PQ5VZV4 182 aa5.4□□□□□ -1.54
ATG4D-210ENST00000588972 CEMP1Q6PRD7 247 aaPredicted RBP5.4□□□□□ -1.54
ATG4D-210ENST00000588972 RNF182Q8N6D2 247 aa5.4□□□□□ -1.54
ATG4D-210ENST00000588972 GNPNAT1Q96EK6 184 aaPredicted RBP5.4□□□□□ -1.54
ATG4D-210ENST00000588972 PHYHIPLQ96FC7 376 aa5.4□□□□□ -1.54
ATG4D-210ENST00000588972 GPR82Q96P67 336 aa5.4□□□□□ -1.54
ATG4D-210ENST00000588972 KCNIP2Q9NS61 270 aa5.4□□□□□ -1.54
ATG4D-210ENST00000588972 KLK5Q9Y337 293 aaPredicted RBP5.4□□□□□ -1.54
ATG4D-210ENST00000588972 DNAH17Q9UFH2 4485 aa5.39□□□□□ -1.55
ATG4D-210ENST00000588972 KRTAP16-1A8MUX0 517 aa5.39□□□□□ -1.55
ATG4D-210ENST00000588972 SLC17A3O00476 420 aa5.39□□□□□ -1.55
ATG4D-210ENST00000588972 EIF3GO75821 320 aaKnown RBP eCLIP5.39□□□□□ -1.55
ATG4D-210ENST00000588972 RPL7P18124 248 aaKnown RBP5.39□□□□□ -1.55
ATG4D-210ENST00000588972 S100A7P31151 101 aa5.39□□□□□ -1.55
ATG4D-210ENST00000588972 C2orf66Q6UXQ4 117 aa5.39□□□□□ -1.55
ATG4D-210ENST00000588972 KRTAP7-1Q8IUC3 87 aa5.39□□□□□ -1.55
ATG4D-210ENST00000588972 BAP18Q8IXM2 172 aa5.39□□□□□ -1.55
ATG4D-210ENST00000588972 ZNF709Q8N972 641 aa5.39□□□□□ -1.55
ATG4D-210ENST00000588972 PFDN5Q99471 154 aa5.39□□□□□ -1.55
ATG4D-210ENST00000588972 ZNF471Q9BX82 626 aaPredicted RBP5.39□□□□□ -1.55
ATG4D-210ENST00000588972 CYTL1Q9NRR1 136 aa5.39□□□□□ -1.55
ATG4D-210ENST00000588972 TIMM9Q9Y5J7 89 aa5.39□□□□□ -1.55
ATG4D-210ENST00000588972 KIR2DL5BA0A0G2JN68 375 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 KIR2DL5BA0A0G2JPC4 375 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 C17orf112F2Z3M2 114 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 H3BQ15 152 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 ISLRO14498 428 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 GIG44P09565 113 aaPredicted RBP5.38□□□□□ -1.55
ATG4D-210ENST00000588972 SEC11BP0C7V7 166 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 ZNF705DP0CH99 300 aaPredicted RBP5.38□□□□□ -1.55
ATG4D-210ENST00000588972 ZNF705BP0CI00 300 aaPredicted RBP5.38□□□□□ -1.55
ATG4D-210ENST00000588972 RBMY1CP0DJD4 496 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 PYYP10082 97 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 MEOX2P50222 304 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 FXYD7P58549 80 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 FAM78BQ5VT40 261 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 LGALS9CQ6DKI2 356 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 MIR17HGQ75NE6 70 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 S100A7AQ86SG5 101 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 BPIFA4PQ86YQ2 179 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 KIR2DL5AQ8N109 375 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 POM121L12Q8N7R1 296 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 HSD17B11Q8NBQ5 300 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 KIR2DL5BQ8NHK3 375 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 SCGB1C1Q8TD33 95 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 PSMG3Q9BT73 122 aaPredicted RBP5.38□□□□□ -1.55
ATG4D-210ENST00000588972 SLC25A2Q9BXI2 301 aa5.38□□□□□ -1.55
ATG4D-210ENST00000588972 SAV1Q9H4B6 383 aaPredicted RBP5.38□□□□□ -1.55
ATG4D-210ENST00000588972 PKD1P98161 4303 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 UMAD1C9J7I0 102 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 H3BMM0 161 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 IFNA7P01567 189 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 IGLC2P0DOY2 106 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 HLA-DRB4P13762 266 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 RAB5CP51148 216 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 RAB2AP61019 212 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 SERF2P84101 59 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 RPL7L1Q6DKI1 246 aaKnown RBP5.37□□□□□ -1.55
ATG4D-210ENST00000588972 LCN15Q6UWW0 184 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 FOXI2Q6ZQN5 318 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 ZNF767PQ75MW2 155 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms