RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 DCTN5Q9BTE1 182 aa6.15□□□□□ -1.43
LAMA3-210ENST00000588770 PLXNA2O75051 1894 aa6.15□□□□□ -1.43
LAMA3-210ENST00000588770 TRAV12-1A0A0B4J245 112 aa6.15□□□□□ -1.43
LAMA3-210ENST00000588770 RHOHQ15669 191 aa6.15□□□□□ -1.43
LAMA3-210ENST00000588770 SLC25A29Q8N8R3 303 aa6.15□□□□□ -1.43
LAMA3-210ENST00000588770 TRBV19A0A075B6N1 114 aa6.14□□□□□ -1.43
LAMA3-210ENST00000588770 IGHV1-45A0A0A0MS14 117 aa6.14□□□□□ -1.43
LAMA3-210ENST00000588770 ZNF22P17026 224 aaPredicted RBP6.14□□□□□ -1.43
LAMA3-210ENST00000588770 CRIP2P52943 208 aaPredicted RBP6.14□□□□□ -1.43
LAMA3-210ENST00000588770 LINC00311Q8N616 119 aa6.14□□□□□ -1.43
LAMA3-210ENST00000588770 LINC00158P58513 81 aa6.14□□□□□ -1.43
LAMA3-210ENST00000588770 C2orf48Q96LS8 159 aa6.14□□□□□ -1.43
LAMA3-210ENST00000588770 HTN1P15515 57 aa6.14□□□□□ -1.43
LAMA3-210ENST00000588770 ATRXP46100 2492 aa6.14□□□□□ -1.43
LAMA3-210ENST00000588770 Q5XG85 94 aa6.14□□□□□ -1.43
LAMA3-210ENST00000588770 FAM110DQ8TAY7 271 aaPredicted RBP6.14□□□□□ -1.43
LAMA3-210ENST00000588770 TPSG1Q9NRR2 321 aa6.14□□□□□ -1.43
LAMA3-210ENST00000588770 IGKV3D-7A0A0C4DH55 119 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 SPTY2D1-AS1A0A0U1RR47 76 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 WNT9BO14905 357 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 CCL3P10147 92 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 UBE2D1P51668 147 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 PRR20EP86478 221 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 PRR20CP86479 221 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 PRR20DP86480 221 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 PRR20BP86481 221 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 PRR20AP86496 221 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 C20orf197Q8N268 126 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 NFAM1Q8NET5 270 aaPredicted RBP6.13□□□□□ -1.43
LAMA3-210ENST00000588770 P0DMU3 169 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 FAM231AP0DMU4 169 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 FAM231CP0DMU5 169 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 CD164Q04900 197 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 MRPS36P82909 103 aaKnown RBP6.13□□□□□ -1.43
LAMA3-210ENST00000588770 CACNA1BQ00975 2339 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 IGKV3-11P04433 115 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 IGLV3-21P80748 117 aaPredicted RBP6.13□□□□□ -1.43
LAMA3-210ENST00000588770 C20orf204Q6ZNR8 217 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 LINC01561Q8N1V8 128 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 CXXC4Q9H2H0 198 aa6.13□□□□□ -1.43
LAMA3-210ENST00000588770 IGHV3-72A0A0B4J1Y9 119 aa6.12□□□□□ -1.43
LAMA3-210ENST00000588770 J3QKU1 62 aa6.12□□□□□ -1.43
LAMA3-210ENST00000588770 TRBV12-3P01733 135 aa6.12□□□□□ -1.43
LAMA3-210ENST00000588770 Q86TA4 180 aa6.12□□□□□ -1.43
LAMA3-210ENST00000588770 SRXN1Q9BYN0 137 aa6.12□□□□□ -1.43
LAMA3-210ENST00000588770 C14orf132Q9NPU4 83 aa6.12□□□□□ -1.43
LAMA3-210ENST00000588770 SCN10AQ9Y5Y9 1956 aa6.12□□□□□ -1.43
LAMA3-210ENST00000588770 TMEM200BQ69YZ2 307 aa6.12□□□□□ -1.43
LAMA3-210ENST00000588770 Q8N8P6 123 aa6.12□□□□□ -1.43
LAMA3-210ENST00000588770 UTRNP46939 3433 aa6.12□□□□□ -1.43
LAMA3-210ENST00000588770 IGKV3OR2-268A0A0C4DH90 116 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 INSP01308 110 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 LINC00271P0C7V0 271 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 MLANAQ16655 118 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 FAM74A4Q5TZK3 123 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 HS3ST6Q96QI5 342 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 NUP210Q8TEM1 1887 aaPredicted RBP6.11□□□□□ -1.43
LAMA3-210ENST00000588770 TFF1P04155 84 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 IGHV3-64A0A075B6Q5 118 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 TMEM178BH3BS89 294 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 PROP1O75360 226 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 ITLN1Q8WWA0 313 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 IGHV1OR15-9A0A0B4J2B8 117 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 WI2-2373I1.2A0A1W2PRP0 233 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 RPL27AP46776 148 aaKnown RBP6.11□□□□□ -1.43
LAMA3-210ENST00000588770 EBI3Q14213 229 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 SDIM1Q6ZPB5 146 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 PRSS22Q9GZN4 317 aa6.11□□□□□ -1.43
LAMA3-210ENST00000588770 C15orf61A6NNL5 157 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 KLHL30-AS1Q8NEE0 82 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 DEFB104AQ8WTQ1 72 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 SLC50A1Q9BRV3 221 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 PLXNA4Q9HCM2 1894 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 SPTAN1Q13813 2472 aaKnown RBP6.1□□□□□ -1.43
LAMA3-210ENST00000588770 IGHV1OR21-1A0A087WYE8 117 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 A0A096LNJ9 63 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 TRBV6-6A0A0A6YYG2 114 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 LINC00473A8K010 186 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 WISP1O95388 367 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 LIFP15018 202 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 SNRPD3P62318 126 aaKnown RBP6.1□□□□□ -1.43
LAMA3-210ENST00000588770 FOXF2Q12947 444 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 FAM201AQ5SY85 155 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 APRG1Q8IVJ8 170 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 SLC25A45Q8N413 288 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 ZNF524Q96C55 264 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 ESM1Q9NQ30 184 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 PRSS46E5RG02 174 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 LMO7DNF2Z398 122 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 POM121L12Q8N7R1 296 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 C1orf159Q96HA4 380 aa6.1□□□□□ -1.43
LAMA3-210ENST00000588770 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.09□□□□□ -1.43
LAMA3-210ENST00000588770 ZNF497Q6ZNH5 498 aa6.09□□□□□ -1.43
LAMA3-210ENST00000588770 RPP25Q9BUL9 199 aaKnown RBP6.09□□□□□ -1.43
LAMA3-210ENST00000588770 ZMAT4Q9H898 229 aa6.09□□□□□ -1.43
LAMA3-210ENST00000588770 FREM1Q5H8C1 2179 aa6.09□□□□□ -1.43
LAMA3-210ENST00000588770 IGKV3-7A0A075B6H7 116 aa6.09□□□□□ -1.43
LAMA3-210ENST00000588770 IGKV3D-11A0A0A0MRZ8 115 aa6.09□□□□□ -1.43
LAMA3-210ENST00000588770 C19orf71A6NCJ1 209 aa6.09□□□□□ -1.43
LAMA3-210ENST00000588770 IGHV3-33P01772 117 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms