RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 ACTR3CQ9C0K3 210 aaPredicted RBP12.38□□□□□ -0.43
SRSF1-208ENST00000584773 C11orf21Q9P2W6 132 aa12.38□□□□□ -0.43
SRSF1-208ENST00000584773 PRO0255Q9UI72 69 aa12.38□□□□□ -0.43
SRSF1-208ENST00000584773 HHLA3Q9XRX5 114 aa12.38□□□□□ -0.43
SRSF1-208ENST00000584773 TRGV4A0A0C4DH28 118 aa12.37□□□□□ -0.43
SRSF1-208ENST00000584773 CXorf1O96002 111 aa12.37□□□□□ -0.43
SRSF1-208ENST00000584773 IGLV2-11P01706 119 aa12.37□□□□□ -0.43
SRSF1-208ENST00000584773 TMEM75Q8N9X5 138 aa12.37□□□□□ -0.43
SRSF1-208ENST00000584773 RASL10AQ92737 203 aa12.37□□□□□ -0.43
SRSF1-208ENST00000584773 PSG8Q9UQ74 426 aa12.37□□□□□ -0.43
SRSF1-208ENST00000584773 BORCS7-ASMTA0A0B4J1R7 106 aa12.37□□□□□ -0.43
SRSF1-208ENST00000584773 FGF8P55075 233 aaPredicted RBP12.37□□□□□ -0.43
SRSF1-208ENST00000584773 SPXQ9BT56 116 aa12.37□□□□□ -0.43
SRSF1-208ENST00000584773 TMEM167BQ9NRX6 74 aa12.37□□□□□ -0.43
SRSF1-208ENST00000584773 EPDR1Q9UM22 224 aa12.37□□□□□ -0.43
SRSF1-208ENST00000584773 ARPC5O15511 151 aa12.36□□□□□ -0.43
SRSF1-208ENST00000584773 TTC32Q5I0X7 151 aa12.36□□□□□ -0.43
SRSF1-208ENST00000584773 PRNTQ86SH4 94 aa12.36□□□□□ -0.43
SRSF1-208ENST00000584773 LINC00479Q96M42 142 aa12.36□□□□□ -0.43
SRSF1-208ENST00000584773 SDF2L1Q9HCN8 221 aa12.36□□□□□ -0.43
SRSF1-208ENST00000584773 TRAV34A0A0B4J273 112 aa12.35□□□□□ -0.43
SRSF1-208ENST00000584773 NXPH4O95158 308 aa12.35□□□□□ -0.43
SRSF1-208ENST00000584773 GCGP01275 180 aa12.35□□□□□ -0.43
SRSF1-208ENST00000584773 MED14OSP0DP75 135 aa12.35□□□□□ -0.43
SRSF1-208ENST00000584773 UBE2G2P60604 165 aa12.35□□□□□ -0.43
SRSF1-208ENST00000584773 NDFIP1Q9BT67 221 aa12.35□□□□□ -0.43
SRSF1-208ENST00000584773 CYTL1Q9NRR1 136 aa12.35□□□□□ -0.43
SRSF1-208ENST00000584773 DNAH5Q8TE73 4624 aa12.34□□□□□ -0.43
SRSF1-208ENST00000584773 LOC100131303A0A0U1RQF7 123 aa12.34□□□□□ -0.43
SRSF1-208ENST00000584773 CTXND1A0A1B0GTU2 59 aa12.34□□□□□ -0.43
SRSF1-208ENST00000584773 SERTM2A0A1B0GWG4 89 aa12.34□□□□□ -0.43
SRSF1-208ENST00000584773 K7EQD1 137 aa12.34□□□□□ -0.43
SRSF1-208ENST00000584773 M0R2P5 195 aa12.34□□□□□ -0.43
SRSF1-208ENST00000584773 FLI1Q01543 452 aaPredicted RBP12.34□□□□□ -0.43
SRSF1-208ENST00000584773 LYPD5Q6UWN5 251 aa12.34□□□□□ -0.43
SRSF1-208ENST00000584773 CYB561D1Q8N8Q1 229 aa12.34□□□□□ -0.43
SRSF1-208ENST00000584773 HSPG2P98160 4391 aa12.33□□□□□ -0.44
SRSF1-208ENST00000584773 TRAV4A0A0B4J268 109 aa12.33□□□□□ -0.44
SRSF1-208ENST00000584773 GYPEP15421 78 aa12.33□□□□□ -0.44
SRSF1-208ENST00000584773 SLAQ13239 276 aa12.33□□□□□ -0.44
SRSF1-208ENST00000584773 MRPL23Q16540 153 aaKnown RBP12.33□□□□□ -0.44
SRSF1-208ENST00000584773 OR4C5Q8NGB2 326 aa12.33□□□□□ -0.44
SRSF1-208ENST00000584773 C9JCJ5 164 aa12.32□□□□□ -0.44
SRSF1-208ENST00000584773 K7EQM0 130 aa12.32□□□□□ -0.44
SRSF1-208ENST00000584773 SIVA1O15304 175 aa12.32□□□□□ -0.44
SRSF1-208ENST00000584773 LINC00315P59091 139 aa12.32□□□□□ -0.44
SRSF1-208ENST00000584773 DPPA3Q6W0C5 159 aa12.32□□□□□ -0.44
SRSF1-208ENST00000584773 KCNS1Q96KK3 526 aa12.32□□□□□ -0.44
SRSF1-208ENST00000584773 A0A1W2PPQ1 181 aa12.31□□□□□ -0.44
SRSF1-208ENST00000584773 A0A1W2PRE2 83 aa12.31□□□□□ -0.44
SRSF1-208ENST00000584773 AKR1C8PQ5T2L2 129 aa12.31□□□□□ -0.44
SRSF1-208ENST00000584773 NEGR1Q7Z3B1 354 aa12.31□□□□□ -0.44
SRSF1-208ENST00000584773 TNFRSF18Q9Y5U5 241 aa12.31□□□□□ -0.44
SRSF1-208ENST00000584773 C16orf90A8MZG2 172 aa12.3□□□□□ -0.44
SRSF1-208ENST00000584773 IFNA7P01567 189 aa12.3□□□□□ -0.44
SRSF1-208ENST00000584773 PFN1P07737 140 aaKnown RBP12.3□□□□□ -0.44
SRSF1-208ENST00000584773 SRIP30626 198 aa12.3□□□□□ -0.44
SRSF1-208ENST00000584773 SMUG1Q53HV7 270 aa12.3□□□□□ -0.44
SRSF1-208ENST00000584773 ABCA13Q86UQ4 5058 aa12.3□□□□□ -0.44
SRSF1-208ENST00000584773 IGHV3-73A0A0B4J1V6 119 aa12.29□□□□□ -0.44
SRSF1-208ENST00000584773 FAM74A7A6NL05 159 aa12.29□□□□□ -0.44
SRSF1-208ENST00000584773 PEX7O00628 323 aa12.29□□□□□ -0.44
SRSF1-208ENST00000584773 TAAR5O14804 337 aa12.29□□□□□ -0.44
SRSF1-208ENST00000584773 FHITP49789 147 aa12.29□□□□□ -0.44
SRSF1-208ENST00000584773 SPATA12Q7Z6I5 190 aa12.29□□□□□ -0.44
SRSF1-208ENST00000584773 WFDC10BQ8IUB3 73 aa12.29□□□□□ -0.44
SRSF1-208ENST00000584773 PCNPQ8WW12 178 aaKnown RBP12.29□□□□□ -0.44
SRSF1-208ENST00000584773 ARL2-SNX15V9GYD0 113 aa12.29□□□□□ -0.44
SRSF1-208ENST00000584773 APOBP04114 4563 aaKnown RBP12.29□□□□□ -0.44
SRSF1-208ENST00000584773 MAP1LC3B2A6NCE7 125 aa12.28□□□□□ -0.44
SRSF1-208ENST00000584773 PGPEP1LA6NFU8 196 aa12.28□□□□□ -0.44
SRSF1-208ENST00000584773 RNASE3P12724 160 aaKnown RBP12.28□□□□□ -0.44
SRSF1-208ENST00000584773 ZNF876PQ49A33 203 aa12.28□□□□□ -0.44
SRSF1-208ENST00000584773 ZFP69Q49AA0 526 aa12.28□□□□□ -0.44
SRSF1-208ENST00000584773 Q6ZRN7 208 aaPredicted RBP12.28□□□□□ -0.44
SRSF1-208ENST00000584773 Q86TA4 180 aa12.28□□□□□ -0.44
SRSF1-208ENST00000584773 OR11H4Q8NGC9 324 aa12.28□□□□□ -0.44
SRSF1-208ENST00000584773 C9orf85Q96MD7 179 aa12.28□□□□□ -0.44
SRSF1-208ENST00000584773 MAP1LC3BQ9GZQ8 125 aa12.28□□□□□ -0.44
SRSF1-208ENST00000584773 IGKV3D-20A0A0C4DH25 116 aa12.27□□□□□ -0.45
SRSF1-208ENST00000584773 GATA1P15976 413 aaPredicted RBP12.27□□□□□ -0.45
SRSF1-208ENST00000584773 KRTAP10-2P60368 255 aa12.27□□□□□ -0.45
SRSF1-208ENST00000584773 RS1O15537 224 aa12.26□□□□□ -0.45
SRSF1-208ENST00000584773 ORM1P02763 201 aa12.26□□□□□ -0.45
SRSF1-208ENST00000584773 ZNF506Q5JVG8 444 aa12.26□□□□□ -0.45
SRSF1-208ENST00000584773 CFAP126Q5VTH2 177 aa12.26□□□□□ -0.45
SRSF1-208ENST00000584773 FBLL1A6NHQ2 334 aaKnown RBP12.25□□□□□ -0.45
SRSF1-208ENST00000584773 FUSP35637 526 aaKnown RBP eCLIP12.25□□□□□ -0.452e-8■■□□□ 12.8
SRSF1-208ENST00000584773 SAPCD1Q5SSQ6 148 aa12.25□□□□□ -0.45
SRSF1-208ENST00000584773 KCNRGQ8N5I3 272 aa12.25□□□□□ -0.45
SRSF1-208ENST00000584773 A0A1B0GV50 99 aa12.24□□□□□ -0.45
SRSF1-208ENST00000584773 CRIP1P50238 77 aa12.24□□□□□ -0.45
SRSF1-208ENST00000584773 SLC25A29Q8N8R3 303 aa12.24□□□□□ -0.45
SRSF1-208ENST00000584773 NHLRC2Q8NBF2 726 aa12.24□□□□□ -0.45
SRSF1-208ENST00000584773 ZC2HC1AQ96GY0 325 aa12.24□□□□□ -0.45
SRSF1-208ENST00000584773 TXNDC17Q9BRA2 123 aa12.24□□□□□ -0.45
SRSF1-208ENST00000584773 PPT1P50897 306 aa12.23□□□□□ -0.45
SRSF1-208ENST00000584773 KRTAP4-5Q9BYR2 181 aa12.23□□□□□ -0.45
SRSF1-208ENST00000584773 LY96Q9Y6Y9 160 aa12.23□□□□□ -0.45
SRSF1-208ENST00000584773 BTF3P20290 206 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms