RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 NDUFAF3Q9BU61 184 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 C18orf65Q6ZTR6 163 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 DLX4Q92988 240 aaPredicted RBP3.56□□□□□ -1.84
NF1-218ENST00000577967 BPTFQ12830 3046 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 ARID1AO14497 2285 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 A8MWV9 139 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 INAFM1C9JVW0 142 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 GAGE6Q13070 117 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 C9orf66Q5T8R8 295 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 SUMO4Q6EEV6 95 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 NAA38Q9BRA0 125 aaKnown RBP3.56□□□□□ -1.84
NF1-218ENST00000577967 SMAD5-AS1Q9Y6J3 95 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 SDHAF1A6NFY7 115 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 NUPR1O60356 82 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 LY6G6DO95868 133 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 LINC00158P58513 81 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 KLF5Q13887 457 aaPredicted RBP3.56□□□□□ -1.84
NF1-218ENST00000577967 C9orf47Q6ZRZ4 202 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 ORAOV1Q8WV07 137 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 ZNF48Q96MX3 618 aaPredicted RBP3.56□□□□□ -1.84
NF1-218ENST00000577967 CBY1Q9Y3M2 126 aa3.56□□□□□ -1.84
NF1-218ENST00000577967 A0A0J9YY99 117 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 A0A1W2PPR1 153 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 CIDEAO60543 219 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 CDPF1Q6NVV7 123 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 C2orf66Q6UXQ4 117 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 GPHB5Q86YW7 130 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 PCNTO95613 3336 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 TMEM141Q96I45 108 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 TP53TG3Q9ULZ0 132 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 LINC01559Q495D7 138 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 K7EMT4 169 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 ZNF124Q15973 351 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 CLPSL2Q6UWE3 100 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 SPCS1Q9Y6A9 102 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 PCNX2A6NKB5 2137 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 AHCTF1Q8WYP5 2266 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 TRBV25-1A0A075B6N4 114 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.55□□□□□ -1.84
NF1-218ENST00000577967 IGKV2-29A2NJV5 120 aaPredicted RBP3.55□□□□□ -1.84
NF1-218ENST00000577967 TMEM89A2RUT3 159 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 EBI3Q14213 229 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 Q8N6K4 173 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 TIMM21Q9BVV7 248 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 ZNF702PQ9H963 129 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 KLF12Q9Y4X4 402 aa3.55□□□□□ -1.84
NF1-218ENST00000577967 A0A087WX48 190 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 ESDP10768 282 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 ZNF80P51504 273 aaPredicted RBP3.54□□□□□ -1.84
NF1-218ENST00000577967 CKS1BP61024 79 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 HSD52Q0P140 79 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 LINC00322Q6ZN03 302 aaPredicted RBP3.54□□□□□ -1.84
NF1-218ENST00000577967 Q8N1Y9 231 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 SMR3AQ99954 134 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 DKK2Q9UBU2 259 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 TRBV7-9A0A0J9YWB2 115 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 CLPSL1A2RUU4 121 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 AVPP01185 164 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 IGLV2-8P01709 118 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 IGHG4P01861 327 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 IGF1P05019 195 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 RASL10AQ92737 203 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 SPAG8Q99932 426 aaPredicted RBP3.54□□□□□ -1.84
NF1-218ENST00000577967 PYGO2Q9BRQ0 406 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 GTF3C1Q12789 2109 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 RBMY1BA6NDE4 496 aaKnown RBP3.54□□□□□ -1.84
NF1-218ENST00000577967 RBMY1EA6NEQ0 496 aaKnown RBP3.54□□□□□ -1.84
NF1-218ENST00000577967 SPINK8P0C7L1 97 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 RBMY1DP0C7P1 496 aaKnown RBP3.54□□□□□ -1.84
NF1-218ENST00000577967 RBMY1A1P0DJD3 496 aaKnown RBP3.54□□□□□ -1.84
NF1-218ENST00000577967 RBMY1CP0DJD4 496 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 HLA-DRB4P13762 266 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 SS18Q15532 418 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 ZC2HC1BQ5TFG8 222 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 ADAMTSL5Q6ZMM2 481 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 TMEM86BQ8N661 226 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 MAP6D1Q9H9H5 199 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 MRPS16Q9Y3D3 137 aaKnown RBP3.54□□□□□ -1.84
NF1-218ENST00000577967 HLA-DRB4X5D2U9 266 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 FREM1Q5H8C1 2179 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 DEFB4AO15263 64 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 PMVKQ15126 192 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 LINC00173Q6ZV60 143 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 PLEKHB2Q96CS7 222 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 SMIM2Q9BVW6 85 aa3.54□□□□□ -1.84
NF1-218ENST00000577967 RHODO00212 210 aa3.53□□□□□ -1.84
NF1-218ENST00000577967 CHAC1Q9BUX1 264 aa3.53□□□□□ -1.84
NF1-218ENST00000577967 EDN2P20800 178 aa3.53□□□□□ -1.84
NF1-218ENST00000577967 MYCNOSP40205 109 aa3.53□□□□□ -1.84
NF1-218ENST00000577967 MPV17L2Q567V2 206 aa3.53□□□□□ -1.84
NF1-218ENST00000577967 Q6ZQT7 251 aa3.53□□□□□ -1.84
NF1-218ENST00000577967 C16orf74Q96GX8 76 aa3.53□□□□□ -1.84
NF1-218ENST00000577967 ZFAND3Q9H8U3 227 aa3.53□□□□□ -1.84
NF1-218ENST00000577967 CHD3Q12873 2000 aaKnown RBP3.53□□□□□ -1.84
NF1-218ENST00000577967 LINC01549A6NIU2 74 aa3.53□□□□□ -1.84
NF1-218ENST00000577967 VWC2LB2RUY7 222 aa3.53□□□□□ -1.84
NF1-218ENST00000577967 SAMD5Q5TGI4 173 aa3.53□□□□□ -1.84
NF1-218ENST00000577967 Q6ZSV7 163 aa3.53□□□□□ -1.84
NF1-218ENST00000577967 DEFB125Q8N687 156 aa3.53□□□□□ -1.84
NF1-218ENST00000577967 MDFICQ9P1T7 246 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms