RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 LOC105371267A0A1B0GV96 52 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 HERVK_113P63121 156 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 IGHV1-69DA0A0B4J2H0 117 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 IGHV1-69P01742 117 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 FOXI1Q12951 378 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 DUX4L9Q6RFH8 374 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 EML5Q05BV3 1969 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 NMSQ5H8A3 153 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 IGKV1-6A0A0C4DH72 117 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 SPINK6Q6UWN8 80 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 CSRP1P21291 193 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 CARHSP1Q9Y2V2 147 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 IGKV2D-26A0A0A0MRZ7 120 aa12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 HOXB4P17483 251 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 KLK5Q9Y337 293 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 LY75O60449 1722 aa12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 C9orf118A6NHY6 69 aa12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 FAM236AA0A1B0GUQ0 79 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 FAM236BA0A1B0GV22 79 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 LINC01559Q495D7 138 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 TMEM61Q8N0U2 210 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 IGKV1D-8A0A087WSZ0 117 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 TEX49A0A1B0GTD5 131 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 LINC00271P0C7V0 271 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 MRPL51Q4U2R6 128 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 CD59P13987 128 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 FAM120AOSQ5T036 256 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 DEFB125Q8N687 156 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 GNRH2O43555 120 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 NDUFB8O95169 186 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 TRAV23DV6A0A075B6W5 121 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 C1orf194Q5T5A4 169 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 ZNF491Q8N8L2 437 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 LINC00473A8K010 186 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 BVES-AS1Q5T3Y7 98 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 ICOSQ9Y6W8 199 aa12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 PRR15LQ9BU68 103 aa12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 F8W1H4 67 aa12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 DENND4CQ5VZ89 1909 aa12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 GP9P14770 177 aa12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 MARF1Q9Y4F3 1742 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 LTAP01374 205 aa12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 SCXQ7RTU7 201 aa12.65□□□□□ -0.39
CACNA1A-202ENST00000573710 MRPL35Q9NZE8 188 aaKnown RBP12.65□□□□□ -0.39
CACNA1A-202ENST00000573710 SLURP1P55000 103 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 ZFP36L1Q07352 338 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 MRPS18CQ9Y3D5 142 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 RNF222A6NCQ9 220 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 COX7A2LO14548 114 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 REG4Q9BYZ8 158 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 CSPG4Q6UVK1 2322 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 NPSP0C0P6 89 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 IGLC2P0DOY2 106 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 IGLC3P0DOY3 106 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 PRR20EP86478 221 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 PRR20CP86479 221 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 PRR20DP86480 221 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 PRR20BP86481 221 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 PRR20AP86496 221 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 RHOHQ15669 191 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 C9orf66Q5T8R8 295 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 SRRM5B3KS81 715 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 A0A1B0GTI1 187 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 IGF2-ASQ6U949 168 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 B9D2Q9BPU9 175 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 ZNF134P52741 427 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 J3QQQ9 107 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 K7EP13 123 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 LY6G6FQ5SQ64 297 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 KIF26AQ9ULI4 1882 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 SLC25A29Q8N8R3 303 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 A0A1W2PPM0 123 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 GATA3P23771 443 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 Q86TA4 180 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 PRSS47A8MTI9 375 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 PFN1P07737 140 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 CD200R1LQ6Q8B3 271 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 GGNQ86UU5 652 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 HIGD2AQ9BW72 106 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 TMEM14BQ9NUH8 114 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 COL5A3P25940 1745 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 A0A1B0GW64 132 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 TRBV12-3P01733 135 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 ZFP36P26651 326 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 OOSP1A8MZH6 123 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 HLA-DMBP28068 263 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 SIRPDQ9H106 197 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 TRBV19A0A075B6N1 114 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 UBE2D1P51668 147 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 NAV3Q8IVL0 2385 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 WDR83OSQ9Y284 106 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 LYPD3O95274 346 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 SERP1Q9Y6X1 66 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 WI2-2373I1.2A0A1W2PRP0 233 aa12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 SH2D6Q7Z4S9 175 aa12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 RBAKDNA6NC62 111 aa12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 SPART-AS1P0CW21 52 aa12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 DKK2Q9UBU2 259 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms