RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 EPDR1Q9UM22 224 aa11.94□□□□□ -0.5
SMG6-212ENST00000573153 SUMO1P63165 101 aaKnown RBP11.93□□□□□ -0.5
SMG6-212ENST00000573153 SOHLH1Q5JUK2 328 aa11.93□□□□□ -0.5
SMG6-212ENST00000573153 CYB561D1Q8N8Q1 229 aa11.93□□□□□ -0.5
SMG6-212ENST00000573153 TMEM75Q8N9X5 138 aa11.93□□□□□ -0.5
SMG6-212ENST00000573153 NDFIP1Q9BT67 221 aa11.93□□□□□ -0.5
SMG6-212ENST00000573153 IGHV3-16A0A0C4DH30 117 aa11.92□□□□□ -0.5
SMG6-212ENST00000573153 HMSDA8MTL9 139 aa11.92□□□□□ -0.5
SMG6-212ENST00000573153 F6UZH7 168 aa11.92□□□□□ -0.5
SMG6-212ENST00000573153 FHL2Q14192 279 aa11.92□□□□□ -0.5
SMG6-212ENST00000573153 AKR1C8PQ5T2L2 129 aa11.92□□□□□ -0.5
SMG6-212ENST00000573153 KCNRGQ8N5I3 272 aa11.92□□□□□ -0.5
SMG6-212ENST00000573153 KCNS1Q96KK3 526 aa11.92□□□□□ -0.5
SMG6-212ENST00000573153 NKX6-2Q9C056 277 aaPredicted RBP11.92□□□□□ -0.5
SMG6-212ENST00000573153 PRO0255Q9UI72 69 aa11.92□□□□□ -0.5
SMG6-212ENST00000573153 PSG8Q9UQ74 426 aa11.92□□□□□ -0.5
SMG6-212ENST00000573153 MRPS16Q9Y3D3 137 aaKnown RBP11.92□□□□□ -0.5
SMG6-212ENST00000573153 FLI1Q01543 452 aaPredicted RBP11.91□□□□□ -0.5
SMG6-212ENST00000573153 ZNF575Q86XF7 245 aa11.91□□□□□ -0.5
SMG6-212ENST00000573153 C6orf223Q8N319 242 aa11.91□□□□□ -0.5
SMG6-212ENST00000573153 Q9H8V8 135 aa11.91□□□□□ -0.5
SMG6-212ENST00000573153 SMLR1H3BR10 107 aa11.9□□□□□ -0.5
SMG6-212ENST00000573153 GNRH2O43555 120 aa11.9□□□□□ -0.5
SMG6-212ENST00000573153 TYMSP04818 313 aa11.9□□□□□ -0.5
SMG6-212ENST00000573153 CRYBA4P53673 196 aa11.9□□□□□ -0.5
SMG6-212ENST00000573153 SDF2L1Q9HCN8 221 aa11.9□□□□□ -0.5
SMG6-212ENST00000573153 FAM74A7A6NL05 159 aa11.89□□□□□ -0.51
SMG6-212ENST00000573153 M0R2P5 195 aa11.89□□□□□ -0.51
SMG6-212ENST00000573153 PAX4O43316 350 aa11.89□□□□□ -0.51
SMG6-212ENST00000573153 PFN1P07737 140 aaKnown RBP11.89□□□□□ -0.51
SMG6-212ENST00000573153 ZNF80P51504 273 aaPredicted RBP11.89□□□□□ -0.51
SMG6-212ENST00000573153 SAPCD1Q5SSQ6 148 aa11.89□□□□□ -0.51
SMG6-212ENST00000573153 OR11H4Q8NGC9 324 aa11.89□□□□□ -0.51
SMG6-212ENST00000573153 SGK494Q96LW2 274 aa11.89□□□□□ -0.51
SMG6-212ENST00000573153 C8orf49Q96NF6 230 aa11.89□□□□□ -0.51
SMG6-212ENST00000573153 NAGKQ9UJ70 344 aa11.89□□□□□ -0.51
SMG6-212ENST00000573153 HHLA3Q9XRX5 114 aa11.89□□□□□ -0.51
SMG6-212ENST00000573153 ICOSQ9Y6W8 199 aa11.89□□□□□ -0.51
SMG6-212ENST00000573153 TRAV4A0A0B4J268 109 aa11.88□□□□□ -0.51
SMG6-212ENST00000573153 A0A1W2PPQ1 181 aa11.88□□□□□ -0.51
SMG6-212ENST00000573153 GCGP01275 180 aa11.88□□□□□ -0.51
SMG6-212ENST00000573153 IGHV3-53P01767 116 aa11.88□□□□□ -0.51
SMG6-212ENST00000573153 BTF3P20290 206 aaKnown RBP11.88□□□□□ -0.51
SMG6-212ENST00000573153 SMUG1Q53HV7 270 aa11.88□□□□□ -0.51
SMG6-212ENST00000573153 C11orf21Q9P2W6 132 aa11.88□□□□□ -0.51
SMG6-212ENST00000573153 ARL2-SNX15V9GYD0 113 aa11.88□□□□□ -0.51
SMG6-212ENST00000573153 A0A0D9SG52 128 aa11.87□□□□□ -0.51
SMG6-212ENST00000573153 MAP1LC3B2A6NCE7 125 aa11.87□□□□□ -0.51
SMG6-212ENST00000573153 SEC11BP0C7V7 166 aa11.87□□□□□ -0.51
SMG6-212ENST00000573153 MED14OSP0DP75 135 aa11.87□□□□□ -0.51
SMG6-212ENST00000573153 FHITP49789 147 aa11.87□□□□□ -0.51
SMG6-212ENST00000573153 ZFP69Q49AA0 526 aa11.87□□□□□ -0.51
SMG6-212ENST00000573153 TTC32Q5I0X7 151 aa11.87□□□□□ -0.51
SMG6-212ENST00000573153 HIST1H2BAQ96A08 127 aa11.87□□□□□ -0.51
SMG6-212ENST00000573153 PTH2Q96A98 100 aa11.87□□□□□ -0.51
SMG6-212ENST00000573153 ZNF479Q96JC4 524 aa11.87□□□□□ -0.51
SMG6-212ENST00000573153 TCEAL7Q9BRU2 100 aa11.87□□□□□ -0.51
SMG6-212ENST00000573153 MAP1LC3BQ9GZQ8 125 aa11.87□□□□□ -0.51
SMG6-212ENST00000573153 PEX7O00628 323 aa11.86□□□□□ -0.51
SMG6-212ENST00000573153 FGF8P55075 233 aaPredicted RBP11.86□□□□□ -0.51
SMG6-212ENST00000573153 MRPL23Q16540 153 aaKnown RBP11.86□□□□□ -0.51
SMG6-212ENST00000573153 Q6ZRN7 208 aaPredicted RBP11.86□□□□□ -0.51
SMG6-212ENST00000573153 COX8CQ7Z4L0 72 aa11.86□□□□□ -0.51
SMG6-212ENST00000573153 PRNTQ86SH4 94 aa11.86□□□□□ -0.51
SMG6-212ENST00000573153 TRGV4A0A0C4DH28 118 aa11.85□□□□□ -0.51
SMG6-212ENST00000573153 UMAD1C9J7I0 102 aa11.85□□□□□ -0.51
SMG6-212ENST00000573153 BCL2L11O43521 198 aa11.85□□□□□ -0.51
SMG6-212ENST00000573153 SFTA3P0C7M3 94 aa11.85□□□□□ -0.51
SMG6-212ENST00000573153 PPT1P50897 306 aa11.85□□□□□ -0.51
SMG6-212ENST00000573153 UBE2G2P60604 165 aa11.85□□□□□ -0.51
SMG6-212ENST00000573153 LINC00479Q96M42 142 aa11.85□□□□□ -0.51
SMG6-212ENST00000573153 C9orf85Q96MD7 179 aa11.85□□□□□ -0.51
SMG6-212ENST00000573153 IFNA7P01567 189 aa11.84□□□□□ -0.51
SMG6-212ENST00000573153 ORM1P02763 201 aa11.84□□□□□ -0.51
SMG6-212ENST00000573153 Q86TA4 180 aa11.84□□□□□ -0.51
SMG6-212ENST00000573153 STOML3Q8TAV4 291 aa11.84□□□□□ -0.51
SMG6-212ENST00000573153 MBD3L1Q8WWY6 194 aa11.84□□□□□ -0.51
SMG6-212ENST00000573153 TRAV34A0A0B4J273 112 aa11.83□□□□□ -0.52
SMG6-212ENST00000573153 TRBV6-1A0A0K0K1D8 114 aa11.83□□□□□ -0.52
SMG6-212ENST00000573153 CIDEAO60543 219 aa11.83□□□□□ -0.52
SMG6-212ENST00000573153 DPPA3Q6W0C5 159 aa11.83□□□□□ -0.52
SMG6-212ENST00000573153 OR4C5Q8NGB2 326 aa11.83□□□□□ -0.52
SMG6-212ENST00000573153 KANTRA0A1W2PQU2 76 aa11.82□□□□□ -0.52
SMG6-212ENST00000573153 K7EQD1 137 aa11.82□□□□□ -0.52
SMG6-212ENST00000573153 PIK3CD-AS1Q5SR53 167 aa11.82□□□□□ -0.52
SMG6-212ENST00000573153 LYPD5Q6UWN5 251 aa11.82□□□□□ -0.52
SMG6-212ENST00000573153 NEGR1Q7Z3B1 354 aa11.82□□□□□ -0.52
SMG6-212ENST00000573153 FMC1Q96HJ9 113 aa11.82□□□□□ -0.52
SMG6-212ENST00000573153 ZFP30Q9Y2G7 519 aa11.82□□□□□ -0.52
SMG6-212ENST00000573153 FABP5P3A8MUU1 101 aa11.81□□□□□ -0.52
SMG6-212ENST00000573153 RNASE3P12724 160 aaKnown RBP11.81□□□□□ -0.52
SMG6-212ENST00000573153 GATA1P15976 413 aaPredicted RBP11.81□□□□□ -0.52
SMG6-212ENST00000573153 EIF5AP63241 154 aaKnown RBP11.81□□□□□ -0.52
SMG6-212ENST00000573153 ZNF876PQ49A33 203 aa11.81□□□□□ -0.52
SMG6-212ENST00000573153 ZNF471Q9BX82 626 aaPredicted RBP11.81□□□□□ -0.52
SMG6-212ENST00000573153 IGKV3D-20A0A0C4DH25 116 aa11.8□□□□□ -0.52
SMG6-212ENST00000573153 C9JCJ5 164 aa11.8□□□□□ -0.52
SMG6-212ENST00000573153 SIVA1O15304 175 aa11.8□□□□□ -0.52
SMG6-212ENST00000573153 RS1O15537 224 aa11.8□□□□□ -0.52
SMG6-212ENST00000573153 NXPH4O95158 308 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms