RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 AQP10Q96PS8 301 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 OTORQ9NRC9 128 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 KLF12Q9Y4X4 402 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 VPS13DQ5THJ4 4388 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 TRGV2A0A075B6R0 118 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 TRAV26-1A0A087WT03 109 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 A0A0J9YY99 117 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 HMGB3O15347 200 aaKnown RBP5.18□□□□□ -1.58
NUP88-205ENST00000572809 GIPP09681 153 aaPredicted RBP5.18□□□□□ -1.58
NUP88-205ENST00000572809 SERF2P84101 59 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 IBA57Q5T440 356 aaKnown RBP5.18□□□□□ -1.58
NUP88-205ENST00000572809 PRR9Q5T870 116 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 SUMO4Q6EEV6 95 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 Q6ZQT7 251 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 ARL6IP6Q8N6S5 226 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 HSD17B11Q8NBQ5 300 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 C11orf72Q8NBR9 251 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 INO80EQ8NBZ0 244 aaPredicted RBP5.18□□□□□ -1.58
NUP88-205ENST00000572809 Q8TAT8 98 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 ASB13Q8WXK3 278 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 C18orf15Q96N68 181 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 TP53TG3Q9ULZ0 132 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 LENEPQ9Y5L5 61 aa5.18□□□□□ -1.58
NUP88-205ENST00000572809 TRGV1A0A0A0MS02 117 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 H3BNG1 76 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 RTL8CO15255 209 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 SPINK4O60575 86 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 MBP02144 154 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 STAG3L2P0CL84 134 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 STAG3L3P0CL85 134 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 ATP6V0CP27449 155 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 CDC34P49427 236 aaPredicted RBP5.17□□□□□ -1.58
NUP88-205ENST00000572809 TCL1AP56279 114 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 Q6AWC8 147 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 SSX7Q7RTT5 188 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 OR2G3Q8NGZ4 309 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 ZNRF2Q8NHG8 242 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 TMED6Q8WW62 240 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 PSMG3Q9BT73 122 aaPredicted RBP5.17□□□□□ -1.58
NUP88-205ENST00000572809 RPH3ALQ9UNE2 315 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 TNFSF18Q9UNG2 199 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 LINC00588Q9Y4M8 146 aa5.17□□□□□ -1.58
NUP88-205ENST00000572809 PRSS47A8MTI9 375 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 ARL14EPLP0DKL9 152 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 ESRGQ1W209 222 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 RGS21Q2M5E4 152 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 SOHLH1Q5JUK2 328 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 MUC21Q5SSG8 566 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 C1orf134Q5TEV5 83 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 FAM159AQ6UWV7 190 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 GOLT1AQ6ZVE7 132 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 OR2T35Q8NGX2 323 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 ST6GAL2Q96JF0 529 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 ACTR3CQ9C0K3 210 aaPredicted RBP5.16□□□□□ -1.58
NUP88-205ENST00000572809 Q9H8V8 135 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 MDFICQ9P1T7 246 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 NACAE9PAV3 2078 aa5.16□□□□□ -1.58
NUP88-205ENST00000572809 FRAS1Q86XX4 4008 aa5.15□□□□□ -1.58
NUP88-205ENST00000572809 FXYD6-FXYD2A0A087WZ82 144 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 TRAV8-1A0A0A6YYK1 113 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 BORCS7-ASMTA0A0B4J1R7 106 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 NBDYA0A0U1RRE5 68 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 A0A1B0GVY2 172 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 RNF222A6NCQ9 220 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 SCGB1D1O95968 90 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 CXorf1O96002 111 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 GCHFRP30047 84 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 GNG5P63218 68 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 ZNF415Q09FC8 603 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 SLAQ13239 276 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 RPL7L1Q6DKI1 246 aaKnown RBP5.15□□□□□ -1.59
NUP88-205ENST00000572809 SUN5Q8TC36 379 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 TVP23CQ96ET8 276 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 VSIG2Q96IQ7 327 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 SPXQ9BT56 116 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 SH3BGRL3Q9H299 93 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 TREM1Q9NP99 234 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 TMEM167BQ9NRX6 74 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 MRPL16Q9NX20 251 aaKnown RBP5.15□□□□□ -1.59
NUP88-205ENST00000572809 DNAH10Q8IVF4 4471 aa5.15□□□□□ -1.59
NUP88-205ENST00000572809 BIRC6Q9NR09 4857 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 A0A096LPF7 62 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 TRAV21A0A0B4J279 112 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 SERTM2A0A1B0GWG4 89 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 K7EQM0 130 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 TAAR5O14804 337 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 GNRH2O43555 120 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 IGHV3-53P01767 116 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 TCRAP04437 139 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 TMEM183BQ1AE95 376 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 TDRG1Q3Y452 100 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 TMEM183AQ8IXX5 376 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 C5orf17Q8NAS9 161 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 SGK494Q96LW2 274 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 PRO0255Q9UI72 69 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 EPDR1Q9UM22 224 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 HHLA3Q9XRX5 114 aa5.14□□□□□ -1.59
NUP88-205ENST00000572809 DNAH6Q9C0G6 4158 aa5.13□□□□□ -1.59
NUP88-205ENST00000572809 F6UZH7 168 aa5.13□□□□□ -1.59
NUP88-205ENST00000572809 CRYBA4P53673 196 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms