RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 B4DEV8 164 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 K7EIL1 84 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 K7EN84 100 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 PPP1R2P9O14990 202 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 GATCO43716 136 aaKnown RBP4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 ORM1P02763 201 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 MT-ND4LP03901 98 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 HTN1P15515 57 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 S100A4P26447 101 aaKnown RBP4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 ASIPP42127 132 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 RHEBQ15382 184 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 MUC21Q5SSG8 566 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 PRR9Q5T870 116 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 COX8CQ7Z4L0 72 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 OR2D3Q8NGH3 330 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 OCC1Q8TAD7 63 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 ISOC2Q96AB3 205 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 SFRP2Q96HF1 295 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 RCHY1Q96PM5 261 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 LINC01587Q99440 93 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 PYGO2Q9BRQ0 406 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 RPP21Q9H633 154 aaKnown RBP4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 SDF2L1Q9HCN8 221 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 IGHV1OR15-1A0A075B7D0 117 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 TMSB15BA0A087X1C1 80 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 TMEM189A5PLL7 270 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 ATP6V1G1O75348 118 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 IGLV2-8P01709 118 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 RPS20P60866 119 aaKnown RBP4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 ZNF415Q09FC8 603 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 RRN3P1Q2M238 152 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 FAM231DQ6ZW35 169 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 Q6ZWC4 215 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 OR10G8Q8NGN5 311 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 BORCS7Q96B45 105 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 SPATA25Q9BR10 227 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 MLST8Q9BVC4 326 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 TPPP3Q9BW30 176 aa4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 RNASE7Q9H1E1 156 aaKnown RBP4.81□□□□□ -1.64
CTDNEP1-204ENST00000570484 A8MWL6 223 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 SNURFLB1AK76 121 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 CRXO43186 299 aaPredicted RBP4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 SPRY2O43597 315 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 S100A1P23297 94 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 S100PP25815 95 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 ZNF80P51504 273 aaPredicted RBP4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 DEFA6Q01524 100 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 ANXA2RQ3ZCQ2 193 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 CT83Q5H943 113 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 KRTAP19-1Q8IUB9 90 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 CLRN3Q8NCR9 226 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 C16orf74Q96GX8 76 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 ZMAT4Q9H898 229 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 RPS10P5Q9NQ39 176 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 OSTCQ9NRP0 149 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 TP53TG1Q9Y2A0 90 aa4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 TIMM8BQ9Y5J9 83 aaPredicted RBP4.8□□□□□ -1.64
CTDNEP1-204ENST00000570484 C19orf71A6NCJ1 209 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 SMIM9A6NGZ8 99 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 H3BVH4 76 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 ZNF324O75467 553 aaPredicted RBP4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 TYMSP04818 313 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 CXCL1P09341 107 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 RBMY1A1P0DJD3 496 aaKnown RBP4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 RBMY1CP0DJD4 496 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 RPL19P84098 196 aaKnown RBP4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 RBMY1FQ15415 496 aaKnown RBP4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 TDRG1Q3Y452 100 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 RNF212Q495C1 297 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 C10orf91Q5T1B1 145 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 KCNIP4Q6PIL6 250 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 LINC00322Q6ZN03 302 aaPredicted RBP4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 FER1L6-AS1Q8NA97 138 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 NUDT10Q8NFP7 164 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 OR11H2Q8NH07 326 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 TMEM263Q8WUH6 116 aaKnown RBP4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 NUDT11Q96G61 164 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 LINC00467Q9BRT7 94 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 CTDSP1Q9GZU7 261 aa4.79□□□□□ -1.64
CTDNEP1-204ENST00000570484 A0A087WWC5 75 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 A0A1W2PPQ1 181 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 C7orf77A4D0Y5 90 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 GRIFINA4D1Z8 144 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 GIG44P09565 113 aaPredicted RBP4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 MIFP14174 115 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 CRIP1P50238 77 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 EMP1P54849 157 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 TCL1AP56279 114 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 ZNF705AQ6ZN79 300 aaPredicted RBP4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 ZNF493Q6ZR52 646 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 C1orf158Q8N1D5 194 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 SYT8Q8NBV8 401 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 CSNK1G2-AS1Q8NCQ2 148 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 TSKUQ8WUA8 353 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 RNF183Q96D59 192 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 RETNQ9HD89 108 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 NAT8BQ9UHF3 227 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 PHLDA3Q9Y5J5 127 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 VWFP04275 2813 aa4.78□□□□□ -1.64
CTDNEP1-204ENST00000570484 IGKV3D-20A0A0C4DH25 116 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms