RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 ATP5G1P05496 136 aa6.5□□□□□ -1.37
CAPN3-219ENST00000569136 NPSP0C0P6 89 aa6.5□□□□□ -1.37
CAPN3-219ENST00000569136 P0DMU3 169 aa6.5□□□□□ -1.37
CAPN3-219ENST00000569136 FAM231AP0DMU4 169 aa6.5□□□□□ -1.37
CAPN3-219ENST00000569136 FAM231CP0DMU5 169 aa6.5□□□□□ -1.37
CAPN3-219ENST00000569136 ATP5G3P48201 142 aa6.5□□□□□ -1.37
CAPN3-219ENST00000569136 EIF5AL1Q6IS14 154 aaKnown RBP6.5□□□□□ -1.37
CAPN3-219ENST00000569136 DPPA3Q6W0C5 159 aa6.5□□□□□ -1.37
CAPN3-219ENST00000569136 GOLT1AQ6ZVE7 132 aa6.5□□□□□ -1.37
CAPN3-219ENST00000569136 OR11H4Q8NGC9 324 aa6.5□□□□□ -1.37
CAPN3-219ENST00000569136 EPDR1Q9UM22 224 aa6.5□□□□□ -1.37
CAPN3-219ENST00000569136 F6UZH7 168 aa6.49□□□□□ -1.37
CAPN3-219ENST00000569136 EIF3GO75821 320 aaKnown RBP eCLIP6.49□□□□□ -1.37
CAPN3-219ENST00000569136 S100A1P23297 94 aa6.49□□□□□ -1.37
CAPN3-219ENST00000569136 BTN1A1Q13410 526 aa6.49□□□□□ -1.37
CAPN3-219ENST00000569136 LGALS9BQ3B8N2 356 aa6.49□□□□□ -1.37
CAPN3-219ENST00000569136 LGALSLQ3ZCW2 172 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-219ENST00000569136 SAPCD1Q5SSQ6 148 aa6.49□□□□□ -1.37
CAPN3-219ENST00000569136 Q6AWC8 147 aa6.49□□□□□ -1.37
CAPN3-219ENST00000569136 TCTE3Q8IZS6 198 aa6.49□□□□□ -1.37
CAPN3-219ENST00000569136 LINC00612Q8N6U2 182 aa6.49□□□□□ -1.37
CAPN3-219ENST00000569136 C15orf53Q8NAA6 179 aa6.49□□□□□ -1.37
CAPN3-219ENST00000569136 NDFIP1Q9BT67 221 aa6.49□□□□□ -1.37
CAPN3-219ENST00000569136 KRTAP4-2Q9BYR5 136 aa6.49□□□□□ -1.37
CAPN3-219ENST00000569136 TREM1Q9NP99 234 aa6.49□□□□□ -1.37
CAPN3-219ENST00000569136 PLECQ15149 4684 aaKnown RBP6.49□□□□□ -1.37
CAPN3-219ENST00000569136 TRAV21A0A0B4J279 112 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 F5H768 121 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 BCL2L11O43521 198 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 IFNA7P01567 189 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 TCRAP04437 139 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 HTN3P15516 51 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 FHITP49789 147 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 PPT1P50897 306 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 NDUFA5Q16718 116 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 TDRG1Q3Y452 100 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 IBA57Q5T440 356 aaKnown RBP6.48□□□□□ -1.37
CAPN3-219ENST00000569136 FAM159AQ6UWV7 190 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 TMUB2Q71RG4 321 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 IQCF2Q8IXL9 164 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 MBD3L1Q8WWY6 194 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 HIST1H2BAQ96A08 127 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 C18orf15Q96N68 181 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 TCEAL7Q9BRU2 100 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 SPXQ9BT56 116 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 ZNF471Q9BX82 626 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-219ENST00000569136 TP53TG3Q9ULZ0 132 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 SACSQ9NZJ4 4579 aa6.48□□□□□ -1.37
CAPN3-219ENST00000569136 RYR3Q15413 4870 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 TPT1P13693 172 aaKnown RBP6.47□□□□□ -1.37
CAPN3-219ENST00000569136 RAB5CP51148 216 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 TCL1AP56279 114 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 FAM3BP58499 235 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-219ENST00000569136 SUMO2P61956 95 aaKnown RBP6.47□□□□□ -1.37
CAPN3-219ENST00000569136 SLAQ13239 276 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 ZNF726P1Q15940 193 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 RNF212Q495C1 297 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 POM121L12Q8N7R1 296 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 CYB561D1Q8N8Q1 229 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 C11orf72Q8NBR9 251 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 Q8TAT8 98 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 SFT2D1Q8WV19 159 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 KCNS1Q96KK3 526 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 ATG101Q9BSB4 218 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 GSN-AS1Q9NRJ2 163 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 RPH3ALQ9UNE2 315 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 PSG8Q9UQ74 426 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 KLF12Q9Y4X4 402 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 ARL2-SNX15V9GYD0 113 aa6.47□□□□□ -1.37
CAPN3-219ENST00000569136 LYSTQ99698 3801 aa6.46□□□□□ -1.37
CAPN3-219ENST00000569136 TRGV2A0A075B6R0 118 aa6.46□□□□□ -1.38
CAPN3-219ENST00000569136 MAP1LC3B2A6NCE7 125 aa6.46□□□□□ -1.38
CAPN3-219ENST00000569136 H3BNG1 76 aa6.46□□□□□ -1.38
CAPN3-219ENST00000569136 SPINK4O60575 86 aa6.46□□□□□ -1.38
CAPN3-219ENST00000569136 C1QBP02746 253 aa6.46□□□□□ -1.38
CAPN3-219ENST00000569136 FLI1Q01543 452 aaPredicted RBP6.46□□□□□ -1.38
CAPN3-219ENST00000569136 TMEM88Q6PEY1 159 aa6.46□□□□□ -1.38
CAPN3-219ENST00000569136 TMEM75Q8N9X5 138 aa6.46□□□□□ -1.38
CAPN3-219ENST00000569136 MAP1LC3BQ9GZQ8 125 aa6.46□□□□□ -1.38
CAPN3-219ENST00000569136 DNAH1Q9P2D7 4330 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 RYR2Q92736 4967 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 TRGV1A0A0A0MS02 117 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 TRAV8-1A0A0A6YYK1 113 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 FAM74A7A6NL05 159 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 GGTLC3B5MD39 225 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 TEX46H3BTG2 121 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 GAGE7O76087 117 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 S100A9P06702 114 aaKnown RBP6.45□□□□□ -1.38
CAPN3-219ENST00000569136 GAGE12FP0CL80 117 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 GAGE12GP0CL81 117 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 GAGE12IP0CL82 117 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 FGF8P55075 233 aaPredicted RBP6.45□□□□□ -1.38
CAPN3-219ENST00000569136 TIRAPP58753 221 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 GNG5P63218 68 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 ZNF415Q09FC8 603 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 OR5I1Q13606 314 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 ZFP69Q49AA0 526 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 SMUG1Q53HV7 270 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 PRR9Q5T870 116 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 SSX7Q7RTT5 188 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms