RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 RGS21Q2M5E4 152 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 TTC32Q5I0X7 151 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 FAM159AQ6UWV7 190 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 Q6ZRN7 208 aaPredicted RBP5.36□□□□□ -1.55
CDH3-209ENST00000569080 IQCF2Q8IXL9 164 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 ZNF479Q96JC4 524 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 SGK494Q96LW2 274 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 C8orf49Q96NF6 230 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 TREM1Q9NP99 234 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 NAGKQ9UJ70 344 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 ICOSQ9Y6W8 199 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 GNRH2O43555 120 aa5.35□□□□□ -1.55
CDH3-209ENST00000569080 CXorf1O96002 111 aa5.35□□□□□ -1.55
CDH3-209ENST00000569080 CYB561D1Q8N8Q1 229 aa5.35□□□□□ -1.55
CDH3-209ENST00000569080 TMEM75Q8N9X5 138 aa5.35□□□□□ -1.55
CDH3-209ENST00000569080 INO80EQ8NBZ0 244 aaPredicted RBP5.35□□□□□ -1.55
CDH3-209ENST00000569080 SPXQ9BT56 116 aa5.35□□□□□ -1.55
CDH3-209ENST00000569080 ACTR3CQ9C0K3 210 aaPredicted RBP5.35□□□□□ -1.55
CDH3-209ENST00000569080 CYTL1Q9NRR1 136 aa5.35□□□□□ -1.55
CDH3-209ENST00000569080 TMEM167BQ9NRX6 74 aa5.35□□□□□ -1.55
CDH3-209ENST00000569080 HHLA3Q9XRX5 114 aa5.35□□□□□ -1.55
CDH3-209ENST00000569080 TRAV4A0A0B4J268 109 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 CTXND1A0A1B0GTU2 59 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 A0A1W2PRE2 83 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 K7EQD1 137 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 M0R2P5 195 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 NXPH4O95158 308 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 GCGP01275 180 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 PFN1P07737 140 aaKnown RBP5.34□□□□□ -1.55
CDH3-209ENST00000569080 BTF3P20290 206 aaKnown RBP5.34□□□□□ -1.55
CDH3-209ENST00000569080 LINC00315P59091 139 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 SUMO1P63165 101 aaKnown RBP5.34□□□□□ -1.55
CDH3-209ENST00000569080 FLI1Q01543 452 aaPredicted RBP5.34□□□□□ -1.55
CDH3-209ENST00000569080 SLAQ13239 276 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 LYPD5Q6UWN5 251 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 C9orf85Q96MD7 179 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 SDF2L1Q9HCN8 221 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 EPDR1Q9UM22 224 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 PSG8Q9UQ74 426 aa5.34□□□□□ -1.55
CDH3-209ENST00000569080 BORCS7-ASMTA0A0B4J1R7 106 aa5.33□□□□□ -1.56
CDH3-209ENST00000569080 TRGV4A0A0C4DH28 118 aa5.33□□□□□ -1.56
CDH3-209ENST00000569080 LOC100131303A0A0U1RQF7 123 aa5.33□□□□□ -1.56
CDH3-209ENST00000569080 FAM74A7A6NL05 159 aa5.33□□□□□ -1.56
CDH3-209ENST00000569080 SMLR1H3BR10 107 aa5.33□□□□□ -1.56
CDH3-209ENST00000569080 SIVA1O15304 175 aa5.33□□□□□ -1.56
CDH3-209ENST00000569080 ARPC5O15511 151 aa5.33□□□□□ -1.56
CDH3-209ENST00000569080 RNASE3P12724 160 aaKnown RBP5.33□□□□□ -1.56
CDH3-209ENST00000569080 GATA1P15976 413 aaPredicted RBP5.33□□□□□ -1.56
CDH3-209ENST00000569080 MRPL23Q16540 153 aaKnown RBP5.33□□□□□ -1.56
CDH3-209ENST00000569080 DPPA3Q6W0C5 159 aa5.33□□□□□ -1.56
CDH3-209ENST00000569080 Q86TA4 180 aa5.33□□□□□ -1.56
CDH3-209ENST00000569080 KCNS1Q96KK3 526 aa5.33□□□□□ -1.56
CDH3-209ENST00000569080 LINC00479Q96M42 142 aa5.33□□□□□ -1.56
CDH3-209ENST00000569080 NDFIP1Q9BT67 221 aa5.33□□□□□ -1.56
CDH3-209ENST00000569080 TRAV34A0A0B4J273 112 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 IGKV3D-20A0A0C4DH25 116 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 FBLL1A6NHQ2 334 aaKnown RBP5.32□□□□□ -1.56
CDH3-209ENST00000569080 C16orf90A8MZG2 172 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 PEX7O00628 323 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 GYPEP15421 78 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 FGF8P55075 233 aaPredicted RBP5.32□□□□□ -1.56
CDH3-209ENST00000569080 KRTAP10-2P60368 255 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 ZNF345Q14585 488 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 SMUG1Q53HV7 270 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 LCE2DQ5TA82 110 aaPredicted RBP5.32□□□□□ -1.56
CDH3-209ENST00000569080 NEGR1Q7Z3B1 354 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 COX8CQ7Z4L0 72 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 PRNTQ86SH4 94 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 WFDC10BQ8IUB3 73 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 OR11H4Q8NGC9 324 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 ARL2-SNX15V9GYD0 113 aa5.32□□□□□ -1.56
CDH3-209ENST00000569080 MAP1LC3B2A6NCE7 125 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 C9JCJ5 164 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 K7EQM0 130 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 TAAR5O14804 337 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 RS1O15537 224 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 CDK2AP2O75956 126 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 ORM1P02763 201 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 DNAH10OSP0CZ25 163 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 SRIP30626 198 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 FHITP49789 147 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 UBE2G2P60604 165 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 ZNF506Q5JVG8 444 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 AKR1C8PQ5T2L2 129 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 CFAP126Q5VTH2 177 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 SPATA12Q7Z6I5 190 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 KCNRGQ8N5I3 272 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 OR4C5Q8NGB2 326 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 PTH2Q96A98 100 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 KRTAP4-5Q9BYR2 181 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 MAP1LC3BQ9GZQ8 125 aa5.31□□□□□ -1.56
CDH3-209ENST00000569080 PGPEP1LA6NFU8 196 aa5.3□□□□□ -1.56
CDH3-209ENST00000569080 LINC00694P0DN24 101 aa5.3□□□□□ -1.56
CDH3-209ENST00000569080 CRIP1P50238 77 aa5.3□□□□□ -1.56
CDH3-209ENST00000569080 TIRAPP58753 221 aa5.3□□□□□ -1.56
CDH3-209ENST00000569080 ZNF876PQ49A33 203 aa5.3□□□□□ -1.56
CDH3-209ENST00000569080 ZFP69Q49AA0 526 aa5.3□□□□□ -1.56
CDH3-209ENST00000569080 SAPCD1Q5SSQ6 148 aa5.3□□□□□ -1.56
CDH3-209ENST00000569080 SLC25A29Q8N8R3 303 aa5.3□□□□□ -1.56
CDH3-209ENST00000569080 PCNPQ8WW12 178 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms