RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 TIMM8BQ9Y5J9 83 aaPredicted RBP11.83□□□□□ -0.52
CNEP1R1-210ENST00000568890 PGPEP1LA6NFU8 196 aa11.82□□□□□ -0.52
CNEP1R1-210ENST00000568890 C9JQL5 133 aa11.82□□□□□ -0.52
CNEP1R1-210ENST00000568890 ZNF674Q2M3X9 581 aa11.81□□□□□ -0.52
CNEP1R1-210ENST00000568890 EIF5A2Q9GZV4 153 aaKnown RBP11.81□□□□□ -0.52
CNEP1R1-210ENST00000568890 FABP5P3A8MUU1 101 aa11.81□□□□□ -0.52
CNEP1R1-210ENST00000568890 S100A9P06702 114 aaKnown RBP11.81□□□□□ -0.52
CNEP1R1-210ENST00000568890 DEFB130BP0DP73 79 aa11.81□□□□□ -0.52
CNEP1R1-210ENST00000568890 DEFB130AP0DP74 79 aa11.81□□□□□ -0.52
CNEP1R1-210ENST00000568890 TAGLN2P37802 199 aaKnown RBP11.81□□□□□ -0.52
CNEP1R1-210ENST00000568890 PHLDA1Q8WV24 401 aaPredicted RBP11.81□□□□□ -0.52
CNEP1R1-210ENST00000568890 TYMSP04818 313 aa11.8□□□□□ -0.52
CNEP1R1-210ENST00000568890 DAZ2Q13117 558 aaKnown RBP11.8□□□□□ -0.52
CNEP1R1-210ENST00000568890 CENPWQ5EE01 88 aa11.8□□□□□ -0.52
CNEP1R1-210ENST00000568890 DYNC2H1Q8NCM8 4307 aaKnown RBP11.8□□□□□ -0.52
CNEP1R1-210ENST00000568890 IGHV3-16A0A0C4DH30 117 aa11.79□□□□□ -0.52
CNEP1R1-210ENST00000568890 LYRM9A8MSI8 78 aa11.79□□□□□ -0.52
CNEP1R1-210ENST00000568890 C3orf84H3BNL1 204 aa11.79□□□□□ -0.52
CNEP1R1-210ENST00000568890 SH2D1AO60880 128 aa11.79□□□□□ -0.52
CNEP1R1-210ENST00000568890 PLECQ15149 4684 aaKnown RBP11.79□□□□□ -0.52
CNEP1R1-210ENST00000568890 Q6ZTI0 123 aa11.79□□□□□ -0.52
CNEP1R1-210ENST00000568890 TCL1AP56279 114 aa11.79□□□□□ -0.52
CNEP1R1-210ENST00000568890 IBA57Q5T440 356 aaKnown RBP11.79□□□□□ -0.52
CNEP1R1-210ENST00000568890 LINC00612Q8N6U2 182 aa11.79□□□□□ -0.52
CNEP1R1-210ENST00000568890 LYSTQ99698 3801 aa11.79□□□□□ -0.52
CNEP1R1-210ENST00000568890 SRP19P09132 144 aaKnown RBP11.78□□□□□ -0.52
CNEP1R1-210ENST00000568890 PARLQ9H300 379 aa11.78□□□□□ -0.52
CNEP1R1-210ENST00000568890 SNURFLB1AK76 121 aa11.78□□□□□ -0.52
CNEP1R1-210ENST00000568890 TMEM250H0YL14 139 aa11.78□□□□□ -0.52
CNEP1R1-210ENST00000568890 M0R036 132 aa11.78□□□□□ -0.52
CNEP1R1-210ENST00000568890 FAM162BQ5T6X4 162 aa11.78□□□□□ -0.52
CNEP1R1-210ENST00000568890 KMT2CQ8NEZ4 4911 aaKnown RBP11.77□□□□□ -0.52
CNEP1R1-210ENST00000568890 SPINK4O60575 86 aa11.77□□□□□ -0.53
CNEP1R1-210ENST00000568890 DAD1P61803 113 aa11.77□□□□□ -0.53
CNEP1R1-210ENST00000568890 CEMP1Q6PRD7 247 aaPredicted RBP11.77□□□□□ -0.53
CNEP1R1-210ENST00000568890 GAGE12BA1L429 117 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 KRBOX1C9JBD0 128 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 GAGE7O76087 117 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 ORM1P02763 201 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 GAGE12FP0CL80 117 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 GAGE12GP0CL81 117 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 GAGE12IP0CL82 117 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 RNASE3P12724 160 aaKnown RBP11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 OCC1Q8TAD7 63 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 KCNS1Q96KK3 526 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 K7EN84 100 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 GNG4P50150 75 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 CEBPGP53567 150 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 RPL19P84098 196 aaKnown RBP11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 OR5I1Q13606 314 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 PRR27Q6MZM9 219 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 SDF2L1Q9HCN8 221 aa11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 MRPL16Q9NX20 251 aaKnown RBP11.76□□□□□ -0.53
CNEP1R1-210ENST00000568890 TRGV1A0A0A0MS02 117 aa11.75□□□□□ -0.53
CNEP1R1-210ENST00000568890 TRGV11A0A075B6L2 103 aa11.74□□□□□ -0.53
CNEP1R1-210ENST00000568890 TMSB15BA0A087X1C1 80 aa11.74□□□□□ -0.53
CNEP1R1-210ENST00000568890 DEFB131BA0A096LNP1 70 aa11.74□□□□□ -0.53
CNEP1R1-210ENST00000568890 GRIFINA4D1Z8 144 aa11.74□□□□□ -0.53
CNEP1R1-210ENST00000568890 B4DEV8 164 aa11.74□□□□□ -0.53
CNEP1R1-210ENST00000568890 TEX48A0A1B0GUV7 120 aa11.74□□□□□ -0.53
CNEP1R1-210ENST00000568890 MGST1P10620 155 aaKnown RBP11.74□□□□□ -0.53
CNEP1R1-210ENST00000568890 ZNF415Q09FC8 603 aa11.74□□□□□ -0.53
CNEP1R1-210ENST00000568890 LINC01559Q495D7 138 aa11.74□□□□□ -0.53
CNEP1R1-210ENST00000568890 CLLU1Q5K131 121 aa11.74□□□□□ -0.53
CNEP1R1-210ENST00000568890 MUC4Q99102 2169 aa11.73□□□□□ -0.53
CNEP1R1-210ENST00000568890 POM121L12Q8N7R1 296 aa11.73□□□□□ -0.53
CNEP1R1-210ENST00000568890 C9orf85Q96MD7 179 aa11.73□□□□□ -0.53
CNEP1R1-210ENST00000568890 TRAV10A0A0B4J240 114 aa11.72□□□□□ -0.53
CNEP1R1-210ENST00000568890 C19orf71A6NCJ1 209 aa11.72□□□□□ -0.53
CNEP1R1-210ENST00000568890 C9JCJ5 164 aa11.72□□□□□ -0.53
CNEP1R1-210ENST00000568890 NDUFS6O75380 124 aaKnown RBP11.72□□□□□ -0.53
CNEP1R1-210ENST00000568890 HTN3P15516 51 aa11.72□□□□□ -0.53
CNEP1R1-210ENST00000568890 LGALS9BQ3B8N2 356 aa11.72□□□□□ -0.53
CNEP1R1-210ENST00000568890 RASL10AQ92737 203 aa11.72□□□□□ -0.53
CNEP1R1-210ENST00000568890 HOXA5P20719 270 aa11.72□□□□□ -0.53
CNEP1R1-210ENST00000568890 RAB14P61106 215 aa11.72□□□□□ -0.53
CNEP1R1-210ENST00000568890 NUPR2A6NF83 97 aa11.71□□□□□ -0.53
CNEP1R1-210ENST00000568890 SMIM12Q96EX1 92 aa11.71□□□□□ -0.53
CNEP1R1-210ENST00000568890 SPXQ9BT56 116 aa11.71□□□□□ -0.53
CNEP1R1-210ENST00000568890 IGLL5B9A064 214 aa11.7□□□□□ -0.54
CNEP1R1-210ENST00000568890 C18orf15Q96N68 181 aa11.7□□□□□ -0.54
CNEP1R1-210ENST00000568890 M0R2P5 195 aa11.7□□□□□ -0.54
CNEP1R1-210ENST00000568890 ARMS2P0C7Q2 107 aa11.7□□□□□ -0.54
CNEP1R1-210ENST00000568890 DNLZQ5SXM8 178 aa11.7□□□□□ -0.54
CNEP1R1-210ENST00000568890 SMIM7Q9BQ49 75 aa11.7□□□□□ -0.54
CNEP1R1-210ENST00000568890 TRGV2A0A075B6R0 118 aa11.69□□□□□ -0.54
CNEP1R1-210ENST00000568890 ATP5G1P05496 136 aa11.69□□□□□ -0.54
CNEP1R1-210ENST00000568890 GZMBP10144 247 aa11.69□□□□□ -0.54
CNEP1R1-210ENST00000568890 PEA15Q15121 130 aa11.69□□□□□ -0.54
CNEP1R1-210ENST00000568890 NUDT10Q8NFP7 164 aa11.69□□□□□ -0.54
CNEP1R1-210ENST00000568890 NUDT11Q96G61 164 aa11.69□□□□□ -0.54
CNEP1R1-210ENST00000568890 RNASE7Q9H1E1 156 aaKnown RBP11.69□□□□□ -0.54
CNEP1R1-210ENST00000568890 IL36BQ9NZH7 164 aa11.69□□□□□ -0.54
CNEP1R1-210ENST00000568890 ZNF727A8MUV8 499 aa11.68□□□□□ -0.54
CNEP1R1-210ENST00000568890 H3BVH4 76 aa11.68□□□□□ -0.54
CNEP1R1-210ENST00000568890 IGHV3-53P01767 116 aa11.68□□□□□ -0.54
CNEP1R1-210ENST00000568890 SFTA3P0C7M3 94 aa11.68□□□□□ -0.54
CNEP1R1-210ENST00000568890 ASIPP42127 132 aa11.68□□□□□ -0.54
CNEP1R1-210ENST00000568890 DMRTA1Q5VZB9 504 aa11.68□□□□□ -0.54
CNEP1R1-210ENST00000568890 ZNF479Q96JC4 524 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms