RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	C7orf71	A4D174	169 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	SNURFL	B1AK76	121 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	KLLN	B2CW77	178 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	UMAD1	C9J7I0	102 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	OR7C2	O60412	319 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	ZNF324	O75467	553 aa	Predicted RBP	4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	NUDT3	O95989	172 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	GPX1	P07203	203 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	FAM3B	P58499	235 aa	Predicted RBP	4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	RAN	P62826	216 aa	Known RBP	4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	SERF2	P84101	59 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	DAZ2	Q13117	558 aa	Known RBP	4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	PLEC	Q15149	4684 aa	Known RBP	4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	RHEB	Q15382	184 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	TMEM78	Q5T7P6	136 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	LINC00336	Q6ZUF6	198 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	LYPD1	Q8N2G4	141 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	HSD17B11	Q8NBQ5	300 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	OR2G3	Q8NGZ4	309 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	FXYD5	Q96DB9	178 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	FAM19A4	Q96LR4	140 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	VGLL1	Q99990	258 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	ATG101	Q9BSB4	218 aa		4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	PSMG3	Q9BT73	122 aa	Predicted RBP	4.86	□□□□□ -1.63
SF3B3-209	ENST00000567635	IGLV2-18	A0A075B6J9	118 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	GAGE12B	A1L429	117 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	DLEU1	O43261	78 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	GAGE7	O76087	117 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	IGKV2D-40	P01614	121 aa	Predicted RBP	4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	SFTA3	P0C7M3	94 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	GAGE12F	P0CL80	117 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	GAGE12G	P0CL81	117 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	GAGE12I	P0CL82	117 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	CRISP2	P16562	243 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	CSN1S1	P47710	185 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	ZNF138	P52744	262 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	TAS2R45	P59539	299 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	OR5I1	Q13606	314 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	ANXA2R	Q3ZCQ2	193 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	KHDC3L	Q587J8	217 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	DPPA3	Q6W0C5	159 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635		Q6ZR54	194 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	LINC00612	Q8N6U2	182 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	LYPD6B	Q8NI32	183 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	ZNF503	Q96F45	646 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	LINC00467	Q9BRT7	94 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	RPS10P5	Q9NQ39	176 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	ZNF492	Q9P255	531 aa		4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.85	□□□□□ -1.63
SF3B3-209	ENST00000567635	TRBV7-9	A0A0J9YWB2	115 aa		4.84	□□□□□ -1.63
SF3B3-209	ENST00000567635		A0A1W2PPV4	95 aa		4.84	□□□□□ -1.63
SF3B3-209	ENST00000567635	RBAKDN	A6NC62	111 aa		4.84	□□□□□ -1.63
SF3B3-209	ENST00000567635		M0R143	59 aa		4.84	□□□□□ -1.63
SF3B3-209	ENST00000567635	PPP1R2P9	O14990	202 aa		4.84	□□□□□ -1.63
SF3B3-209	ENST00000567635	RTL8C	O15255	209 aa		4.84	□□□□□ -1.63
SF3B3-209	ENST00000567635	CCL18	P55774	89 aa		4.84	□□□□□ -1.63
SF3B3-209	ENST00000567635	UBE2L3	P68036	154 aa	Known RBP	4.84	□□□□□ -1.63
SF3B3-209	ENST00000567635	AKR1C8P	Q5T2L2	129 aa		4.84	□□□□□ -1.63
SF3B3-209	ENST00000567635	ZFAND2A	Q8N6M9	145 aa		4.84	□□□□□ -1.63
SF3B3-209	ENST00000567635	OR10D4P	Q8NGN7	298 aa		4.84	□□□□□ -1.63
SF3B3-209	ENST00000567635	SH3BGRL3	Q9H299	93 aa		4.84	□□□□□ -1.63
SF3B3-209	ENST00000567635		Q9H3A6	140 aa		4.84	□□□□□ -1.63
SF3B3-209	ENST00000567635	TRGV2	A0A075B6R0	118 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	TRAV26-1	A0A087WT03	109 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	TRAV1-1	A0A0B4J248	108 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	PGP	A6NDG6	321 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	PRSS29P	A6NIE9	313 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	DIRC3	C9JPN6	131 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635		H3BNG1	76 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	ZNF25	P17030	456 aa	Predicted RBP	4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	G0S2	P27469	103 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	NDUFA6	P56556	154 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	SOHLH1	Q5JUK2	328 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	PQLC2	Q6ZP29	291 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635		Q6ZTI0	123 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	C11orf72	Q8NBR9	251 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	OR10G4	Q8NGN3	311 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	OR10G9	Q8NGN4	311 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	OR10G7	Q8NGN6	311 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	MBD3L1	Q8WWY6	194 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	OTOR	Q9NRC9	128 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	KLF12	Q9Y4X4	402 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	LENEP	Q9Y5L5	61 aa		4.83	□□□□□ -1.64
SF3B3-209	ENST00000567635	IGHV1OR15-1	A0A075B7D0	117 aa		4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635	TRGV1	A0A0A0MS02	117 aa		4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635		A0A0J9YY99	117 aa		4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635		A0A1W2PPQ1	181 aa		4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635	C7orf77	A4D0Y5	90 aa		4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635	HSBP1L1	C9JCN9	74 aa		4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635		M0R036	132 aa		4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635	CIDEA	O60543	219 aa		4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635	SPINK4	O60575	86 aa		4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635	FHIT	P49789	147 aa		4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635	IBA57	Q5T440	356 aa	Known RBP	4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635	PRR9	Q5T870	116 aa		4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635	C1orf134	Q5TEV5	83 aa		4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635		Q6ZQT7	251 aa		4.82	□□□□□ -1.64
SF3B3-209	ENST00000567635	SSX7	Q7RTT5	188 aa		4.82	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms