RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 EVX1P49640 407 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 EMP1P54849 157 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 AQP4P55087 323 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 RAB5BP61020 215 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 COPZ1P61923 177 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 SNRPD2P62316 118 aaKnown RBP1.04□□□□□ -2.24
PALB2-203ENST00000565038 UBA52P62987 128 aaKnown RBP1.04□□□□□ -2.24
PALB2-203ENST00000565038 IFITM2Q01629 132 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 RPL18Q07020 188 aaKnown RBP1.04□□□□□ -2.24
PALB2-203ENST00000565038 OR2F1Q13607 317 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 KCNJ8Q15842 424 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 GUK1Q16774 197 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 LIN52Q52LA3 116 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 DHRS4L2Q6PKH6 230 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 OR6V1Q8N148 313 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 DYNAPQ8N1N2 210 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 ANKRD29Q8N6D5 301 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 C3orf56Q8N813 242 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 SLC30A7Q8NEW0 376 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 OR1M1Q8NGA1 313 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 ANP32BQ92688 251 aaKnown RBP1.04□□□□□ -2.24
PALB2-203ENST00000565038 ZHX1-C8orf76Q96EF9 292 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 AMELYQ99218 206 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 OR2H1Q9GZK4 316 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 WDR61Q9GZS3 305 aaKnown RBP1.04□□□□□ -2.24
PALB2-203ENST00000565038 CST9LQ9H4G1 147 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 EFCAB1Q9HAE3 211 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 DYNLRB1Q9NP97 96 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 SAR1AQ9NR31 198 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 IL36BQ9NZH7 164 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 SLC35A3Q9Y2D2 325 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 TENM3Q9P273 2699 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 CR1P17927 2039 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 ARFGEF3Q5TH69 2177 aa1.04□□□□□ -2.24
PALB2-203ENST00000565038 WNK2Q9Y3S1 2297 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 IGHV3-64A0A075B6Q5 118 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 TRGV2A0A075B6R0 118 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 TRAV7A0A075B6U4 112 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 A0A0G2JND7 137 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 TRAPPC13A5PLN9 417 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 B4DSR2 109 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 H3BQF6 201 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 FXYD1O00168 92 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 OR2T1O43869 369 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 EDF1O60869 148 aaKnown RBP1.03□□□□□ -2.24
PALB2-203ENST00000565038 NOS1APO75052 506 aaPredicted RBP1.03□□□□□ -2.24
PALB2-203ENST00000565038 UBL3O95164 117 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 ZNF682O95780 498 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 CRYZL1O95825 349 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 SERPINA1P01009 418 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 GYPAP02724 150 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 GYPBP06028 91 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 CST2P09228 141 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 TRGC1P0CF51 173 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 SULT1A3P0DMM9 295 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 SULT1A4P0DMN0 295 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 COX4I1P13073 169 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 IDO1P14902 403 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 FKBP2P26885 142 aaKnown RBP1.03□□□□□ -2.24
PALB2-203ENST00000565038 PSME3P61289 254 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 POLR2GP62487 172 aaKnown RBP eCLIP1.03□□□□□ -2.24
PALB2-203ENST00000565038 HIST1H4AP62805 103 aaKnown RBP1.03□□□□□ -2.24
PALB2-203ENST00000565038 BLCAPP62952 87 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 SELENOWP63302 87 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 HIST1H3AP68431 136 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 PSPHP78330 225 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 AESQ08117 197 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 KLRD1Q13241 179 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 C10orf128Q5T292 105 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 FAM27BQ5VT28 67 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 C10orf99Q6UWK7 81 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 Q6ZS49 121 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 SLC36A1Q7Z2H8 476 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 ANGPTL5Q86XS5 388 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 TMEM86BQ8N661 226 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 OR8D4Q8NGM9 314 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 ITFG2Q969R8 447 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 OR51V1Q9H2C8 321 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 VCX3BQ9H321 246 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 NMNAT1Q9HAN9 279 aaPredicted RBP1.03□□□□□ -2.24
PALB2-203ENST00000565038 XAGE1AQ9HD64 81 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 PRO2289Q9P1D8 64 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 NDUFAF1Q9Y375 327 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 LHFPL6Q9Y693 200 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 V9GYQ6 96 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 HSPG2P98160 4391 aa1.03□□□□□ -2.24
PALB2-203ENST00000565038 FAT3Q8TDW7 4589 aa1.03□□□□□ -2.25
PALB2-203ENST00000565038 PRORSD1PA6NEY8 169 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 M0R129 80 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 M0R233 179 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 SLC22A1O15245 554 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 CHP2O43745 196 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 OR5F1O95221 314 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 NAPSAO96009 420 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 IGHV3-7P01780 117 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 HLA-DRB1P01911 266 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 S100A6P06703 90 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 CD14P08571 375 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 OR5G3P0C626 314 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 TAS2R41P59536 307 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms