RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 PQLC2Q6ZP29 291 aa13.65□□□□□ -0.22
GDE1-203ENST00000564172 RAB37Q96AX2 223 aa13.65□□□□□ -0.22
GDE1-203ENST00000564172 KLK15Q9H2R5 256 aa13.65□□□□□ -0.22
GDE1-203ENST00000564172 ANK3Q12955 4377 aaKnown RBP13.65□□□□□ -0.23
GDE1-203ENST00000564172 SCGB2A1O75556 95 aa13.64□□□□□ -0.23
GDE1-203ENST00000564172 CLEC19AQ6UXS0 136 aa13.64□□□□□ -0.23
GDE1-203ENST00000564172 ZNF329Q86UD4 541 aa13.64□□□□□ -0.23
GDE1-203ENST00000564172 TM2D2Q9BX73 214 aa13.64□□□□□ -0.23
GDE1-203ENST00000564172 SLC25A2Q9BXI2 301 aa13.64□□□□□ -0.23
GDE1-203ENST00000564172 VCX2Q9H322 139 aa13.64□□□□□ -0.23
GDE1-203ENST00000564172 A0A087WX48 190 aa13.64□□□□□ -0.23
GDE1-203ENST00000564172 FLNBO75369 2602 aaKnown RBP13.64□□□□□ -0.23
GDE1-203ENST00000564172 Q6ZUT4 128 aa13.64□□□□□ -0.23
GDE1-203ENST00000564172 RNF125Q96EQ8 232 aa13.64□□□□□ -0.23
GDE1-203ENST00000564172 URB1-AS1Q96HZ7 61 aa13.64□□□□□ -0.23
GDE1-203ENST00000564172 HIGD1AQ9Y241 93 aa13.64□□□□□ -0.23
GDE1-203ENST00000564172 WI2-2373I1.2A0A1W2PRP0 233 aa13.63□□□□□ -0.23
GDE1-203ENST00000564172 GAGE12JA6NER3 117 aa13.63□□□□□ -0.23
GDE1-203ENST00000564172 SPINK4O60575 86 aa13.63□□□□□ -0.23
GDE1-203ENST00000564172 GAGE7O76087 117 aa13.63□□□□□ -0.23
GDE1-203ENST00000564172 IL4P05112 153 aa13.63□□□□□ -0.23
GDE1-203ENST00000564172 GAGE12FP0CL80 117 aa13.63□□□□□ -0.23
GDE1-203ENST00000564172 GAGE12GP0CL81 117 aa13.63□□□□□ -0.23
GDE1-203ENST00000564172 GAGE12IP0CL82 117 aa13.63□□□□□ -0.23
GDE1-203ENST00000564172 GAGE4Q13068 117 aa13.63□□□□□ -0.23
GDE1-203ENST00000564172 HIVEP2P31629 2446 aa13.63□□□□□ -0.23
GDE1-203ENST00000564172 USMG5Q96IX5 58 aa13.63□□□□□ -0.23
GDE1-203ENST00000564172 MTORP42345 2549 aa13.62□□□□□ -0.23
GDE1-203ENST00000564172 IGHV1-24A0A0C4DH33 117 aa13.62□□□□□ -0.23
GDE1-203ENST00000564172 DNAJC9-AS1A6NH13 148 aa13.62□□□□□ -0.23
GDE1-203ENST00000564172 FOXE3Q13461 319 aa13.62□□□□□ -0.23
GDE1-203ENST00000564172 ETDBQ3ZM63 59 aa13.62□□□□□ -0.23
GDE1-203ENST00000564172 Q8N2B8 174 aa13.62□□□□□ -0.23
GDE1-203ENST00000564172 ZNF414Q96IQ9 312 aa13.62□□□□□ -0.23
GDE1-203ENST00000564172 SLC25A39Q9BZJ4 359 aaPredicted RBP13.62□□□□□ -0.23
GDE1-203ENST00000564172 ESM1Q9NQ30 184 aa13.62□□□□□ -0.23
GDE1-203ENST00000564172 TMEM167BQ9NRX6 74 aa13.62□□□□□ -0.23
GDE1-203ENST00000564172 MT-ATP8P03928 68 aa13.61□□□□□ -0.23
GDE1-203ENST00000564172 PSMB8P28062 276 aa13.61□□□□□ -0.23
GDE1-203ENST00000564172 ZFAND6Q6FIF0 208 aa13.61□□□□□ -0.23
GDE1-203ENST00000564172 IGHV3-35A0A0C4DH35 117 aa13.6□□□□□ -0.23
GDE1-203ENST00000564172 C10orf99Q6UWK7 81 aa13.6□□□□□ -0.23
GDE1-203ENST00000564172 TRAV25A0A0B4J276 109 aa13.6□□□□□ -0.23
GDE1-203ENST00000564172 FABP5P3A8MUU1 101 aa13.6□□□□□ -0.23
GDE1-203ENST00000564172 PYYP10082 97 aa13.6□□□□□ -0.23
GDE1-203ENST00000564172 SRD5A1P18405 259 aa13.6□□□□□ -0.23
GDE1-203ENST00000564172 NHLRC2Q8NBF2 726 aa13.6□□□□□ -0.23
GDE1-203ENST00000564172 PTH2Q96A98 100 aa13.6□□□□□ -0.23
GDE1-203ENST00000564172 PAXXQ9BUH6 204 aa13.6□□□□□ -0.23
GDE1-203ENST00000564172 E9PLD3 99 aa13.59□□□□□ -0.23
GDE1-203ENST00000564172 FOXI1Q12951 378 aa13.59□□□□□ -0.23
GDE1-203ENST00000564172 SH2D6Q7Z4S9 175 aa13.59□□□□□ -0.23
GDE1-203ENST00000564172 SYT8Q8NBV8 401 aa13.59□□□□□ -0.23
GDE1-203ENST00000564172 C20orf78Q9BR46 151 aa13.59□□□□□ -0.23
GDE1-203ENST00000564172 YTHDF2Q9Y5A9 579 aaKnown RBP13.59□□□□□ -0.23
GDE1-203ENST00000564172 TMEM89A2RUT3 159 aa13.59□□□□□ -0.23
GDE1-203ENST00000564172 NHLRC4P0CG21 123 aaPredicted RBP13.59□□□□□ -0.23
GDE1-203ENST00000564172 MGST1P10620 155 aaKnown RBP13.59□□□□□ -0.23
GDE1-203ENST00000564172 UBE2L3P68036 154 aaKnown RBP13.59□□□□□ -0.23
GDE1-203ENST00000564172 Q6AWC8 147 aa13.59□□□□□ -0.23
GDE1-203ENST00000564172 SHANK2-AS3Q9BTD1 123 aa13.59□□□□□ -0.23
GDE1-203ENST00000564172 IGHV3-11P01762 117 aa13.58□□□□□ -0.24
GDE1-203ENST00000564172 SLC35B1P78383 322 aa13.58□□□□□ -0.24
GDE1-203ENST00000564172 GAGE13Q4V321 117 aa13.58□□□□□ -0.24
GDE1-203ENST00000564172 LINC00173Q6ZV60 143 aa13.58□□□□□ -0.24
GDE1-203ENST00000564172 ATP5L2Q7Z4Y8 100 aa13.58□□□□□ -0.24
GDE1-203ENST00000564172 A0A1W2PRE2 83 aa13.58□□□□□ -0.24
GDE1-203ENST00000564172 H3BRN7 92 aa13.58□□□□□ -0.24
GDE1-203ENST00000564172 SNAI2O43623 268 aa13.58□□□□□ -0.24
GDE1-203ENST00000564172 FXYD5Q96DB9 178 aa13.58□□□□□ -0.24
GDE1-203ENST00000564172 PRO0461Q9UI25 63 aa13.58□□□□□ -0.24
GDE1-203ENST00000564172 TRBV12-3P01733 135 aa13.57□□□□□ -0.24
GDE1-203ENST00000564172 CT45A10P0DMU9 189 aa13.57□□□□□ -0.24
GDE1-203ENST00000564172 XGP55808 180 aa13.57□□□□□ -0.24
GDE1-203ENST00000564172 ZFAND3Q9H8U3 227 aa13.57□□□□□ -0.24
GDE1-203ENST00000564172 IBA57Q5T440 356 aaKnown RBP13.56□□□□□ -0.24
GDE1-203ENST00000564172 PHLDA1Q8WV24 401 aaPredicted RBP13.56□□□□□ -0.24
GDE1-203ENST00000564172 IGHV3OR16-8A0A075B7F1 116 aa13.56□□□□□ -0.24
GDE1-203ENST00000564172 M0QXV9 152 aa13.56□□□□□ -0.24
GDE1-203ENST00000564172 GP9P14770 177 aa13.56□□□□□ -0.24
GDE1-203ENST00000564172 CENPWQ5EE01 88 aa13.56□□□□□ -0.24
GDE1-203ENST00000564172 Q6ZSV7 163 aa13.56□□□□□ -0.24
GDE1-203ENST00000564172 Q71RC1 249 aaPredicted RBP13.56□□□□□ -0.24
GDE1-203ENST00000564172 RNASE7Q9H1E1 156 aaKnown RBP13.56□□□□□ -0.24
GDE1-203ENST00000564172 ELANEP08246 267 aa13.55□□□□□ -0.24
GDE1-203ENST00000564172 CUBNO60494 3623 aa13.55□□□□□ -0.24
GDE1-203ENST00000564172 A4D1N5 150 aa13.55□□□□□ -0.24
GDE1-203ENST00000564172 TMEM14CQ9P0S9 112 aa13.55□□□□□ -0.24
GDE1-203ENST00000564172 HIGD1BQ9P298 99 aa13.55□□□□□ -0.24
GDE1-203ENST00000564172 APOMO95445 188 aa13.54□□□□□ -0.24
GDE1-203ENST00000564172 GDF5OSQ5U4N7 250 aa13.54□□□□□ -0.24
GDE1-203ENST00000564172 GLMPQ8WWB7 406 aa13.54□□□□□ -0.24
GDE1-203ENST00000564172 RNASE1P07998 156 aaKnown RBP13.54□□□□□ -0.24
GDE1-203ENST00000564172 INSL3P51460 131 aa13.54□□□□□ -0.24
GDE1-203ENST00000564172 HILS1P60008 231 aa13.54□□□□□ -0.24
GDE1-203ENST00000564172 PSMG4Q5JS54 123 aa13.54□□□□□ -0.24
GDE1-203ENST00000564172 TMEM126AQ9H061 195 aa13.54□□□□□ -0.24
GDE1-203ENST00000564172 CLPSL1A2RUU4 121 aa13.53□□□□□ -0.24
GDE1-203ENST00000564172 GGTLC3B5MD39 225 aa13.53□□□□□ -0.24
GDE1-203ENST00000564172 FAM231DQ6ZW35 169 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms