RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 LINC00311Q8N616 119 aa9.53□□□□□ -0.88
SCAMP2-204ENST00000563829 ZNF576Q9H609 170 aa9.53□□□□□ -0.88
SCAMP2-204ENST00000563829 SPRY2O43597 315 aa9.52□□□□□ -0.89
SCAMP2-204ENST00000563829 C10orf126Q8N4M7 172 aa9.52□□□□□ -0.89
SCAMP2-204ENST00000563829 TMEM190Q8WZ59 177 aa9.52□□□□□ -0.89
SCAMP2-204ENST00000563829 C11orf21Q9P2W6 132 aa9.52□□□□□ -0.89
SCAMP2-204ENST00000563829 A0A1W2PNU3 283 aaPredicted RBP9.52□□□□□ -0.89
SCAMP2-204ENST00000563829 IGHV1-8P0DP01 117 aa9.52□□□□□ -0.89
SCAMP2-204ENST00000563829 RPL7P18124 248 aaKnown RBP9.52□□□□□ -0.89
SCAMP2-204ENST00000563829 TMEM155Q4W5P6 130 aa9.52□□□□□ -0.89
SCAMP2-204ENST00000563829 RNF182Q8N6D2 247 aa9.52□□□□□ -0.89
SCAMP2-204ENST00000563829 IGHG4P01861 327 aa9.51□□□□□ -0.89
SCAMP2-204ENST00000563829 ASIPP42127 132 aa9.51□□□□□ -0.89
SCAMP2-204ENST00000563829 BAALCQ8WXS3 180 aa9.51□□□□□ -0.89
SCAMP2-204ENST00000563829 SMIM2Q9BVW6 85 aa9.51□□□□□ -0.89
SCAMP2-204ENST00000563829 IGHV1-3A0A0C4DH29 117 aa9.51□□□□□ -0.89
SCAMP2-204ENST00000563829 Q8N1Y9 231 aa9.51□□□□□ -0.89
SCAMP2-204ENST00000563829 C15orf53Q8NAA6 179 aa9.51□□□□□ -0.89
SCAMP2-204ENST00000563829 PRO1854Q9UHT4 67 aa9.51□□□□□ -0.89
SCAMP2-204ENST00000563829 A0A0J9YY99 117 aa9.51□□□□□ -0.89
SCAMP2-204ENST00000563829 TEX49A0A1B0GTD5 131 aa9.51□□□□□ -0.89
SCAMP2-204ENST00000563829 IGFBPL1Q8WX77 278 aa9.51□□□□□ -0.89
SCAMP2-204ENST00000563829 TNFRSF18Q9Y5U5 241 aa9.51□□□□□ -0.89
SCAMP2-204ENST00000563829 COX6B1P14854 86 aa9.5□□□□□ -0.89
SCAMP2-204ENST00000563829 COX7A1P24310 79 aa9.5□□□□□ -0.89
SCAMP2-204ENST00000563829 C22orf34Q6ZV56 151 aa9.5□□□□□ -0.89
SCAMP2-204ENST00000563829 EP300Q09472 2414 aaPredicted RBP9.5□□□□□ -0.89
SCAMP2-204ENST00000563829 C2orf66Q6UXQ4 117 aa9.5□□□□□ -0.89
SCAMP2-204ENST00000563829 SMAD5-AS1Q9Y6J3 95 aa9.5□□□□□ -0.89
SCAMP2-204ENST00000563829 LAMA5O15230 3695 aa9.49□□□□□ -0.89
SCAMP2-204ENST00000563829 CENPVL3A0A0U1RRI6 287 aa9.49□□□□□ -0.89
SCAMP2-204ENST00000563829 LOXP28300 417 aaPredicted RBP9.49□□□□□ -0.89
SCAMP2-204ENST00000563829 TOMM6Q96B49 74 aa9.49□□□□□ -0.89
SCAMP2-204ENST00000563829 PSMG3-AS1Q96PY0 264 aa9.49□□□□□ -0.89
SCAMP2-204ENST00000563829 BEX4Q9NWD9 120 aaPredicted RBP9.49□□□□□ -0.89
SCAMP2-204ENST00000563829 IGHV4-39P01824 125 aa9.49□□□□□ -0.89
SCAMP2-204ENST00000563829 ORMDL2Q53FV1 153 aa9.49□□□□□ -0.89
SCAMP2-204ENST00000563829 ZNF474Q6S9Z5 364 aaPredicted RBP9.49□□□□□ -0.89
SCAMP2-204ENST00000563829 TRAV8-4A0A0B4J246 113 aa9.49□□□□□ -0.89
SCAMP2-204ENST00000563829 ID1P41134 155 aa9.49□□□□□ -0.89
SCAMP2-204ENST00000563829 RPL39LQ96EH5 51 aaKnown RBP9.49□□□□□ -0.89
SCAMP2-204ENST00000563829 CNOT1A5YKK6 2376 aaKnown RBP9.48□□□□□ -0.89
SCAMP2-204ENST00000563829 IGHV3-30P01768 117 aa9.48□□□□□ -0.89
SCAMP2-204ENST00000563829 IGHG3P01860 377 aa9.48□□□□□ -0.89
SCAMP2-204ENST00000563829 IGHV3-30-5P0DP03 117 aa9.48□□□□□ -0.89
SCAMP2-204ENST00000563829 Q1RN00 199 aa9.48□□□□□ -0.89
SCAMP2-204ENST00000563829 IGHV3-66A0A0C4DH42 116 aa9.48□□□□□ -0.89
SCAMP2-204ENST00000563829 J3KRW8 73 aa9.48□□□□□ -0.89
SCAMP2-204ENST00000563829 SUMO2P61956 95 aaKnown RBP9.48□□□□□ -0.89
SCAMP2-204ENST00000563829 SRSF2Q01130 221 aaKnown RBP9.48□□□□□ -0.89
SCAMP2-204ENST00000563829 C8orf31Q8N9H6 132 aa9.48□□□□□ -0.89
SCAMP2-204ENST00000563829 ODF3Q96PU9 254 aa9.48□□□□□ -0.89
SCAMP2-204ENST00000563829 PPDPFQ9H3Y8 114 aa9.48□□□□□ -0.89
SCAMP2-204ENST00000563829 ADGRG4Q8IZF6 3080 aa9.48□□□□□ -0.89
SCAMP2-204ENST00000563829 CACNA1BQ00975 2339 aa9.47□□□□□ -0.89
SCAMP2-204ENST00000563829 IGHV3OR16-13A0A075B7E8 117 aa9.47□□□□□ -0.89
SCAMP2-204ENST00000563829 IGHV3-74A0A0B4J1X5 117 aa9.47□□□□□ -0.89
SCAMP2-204ENST00000563829 C11orf86A6NJI1 115 aa9.47□□□□□ -0.89
SCAMP2-204ENST00000563829 M0R381 172 aa9.47□□□□□ -0.89
SCAMP2-204ENST00000563829 MFAP4P55083 255 aa9.47□□□□□ -0.89
SCAMP2-204ENST00000563829 CHCHD5Q9BSY4 110 aa9.47□□□□□ -0.89
SCAMP2-204ENST00000563829 RAB1BQ9H0U4 201 aa9.47□□□□□ -0.89
SCAMP2-204ENST00000563829 IGHV7-4-1A0A0J9YVY3 117 aa9.47□□□□□ -0.89
SCAMP2-204ENST00000563829 DLX6P56179 175 aa9.47□□□□□ -0.89
SCAMP2-204ENST00000563829 MGAQ8IWI9 3026 aa9.47□□□□□ -0.89
SCAMP2-204ENST00000563829 ELANEP08246 267 aa9.47□□□□□ -0.89
SCAMP2-204ENST00000563829 TMEM170BQ5T4T1 132 aa9.47□□□□□ -0.89
SCAMP2-204ENST00000563829 A4D1N5 150 aa9.46□□□□□ -0.89
SCAMP2-204ENST00000563829 ZNF672Q499Z4 452 aaPredicted RBP9.46□□□□□ -0.89
SCAMP2-204ENST00000563829 PIP4P1Q86T03 277 aa9.46□□□□□ -0.89
SCAMP2-204ENST00000563829 OR10J6PQ8NGY7 276 aa9.46□□□□□ -0.89
SCAMP2-204ENST00000563829 FAM57AQ8TBR7 257 aa9.46□□□□□ -0.89
SCAMP2-204ENST00000563829 TMEM178BH3BS89 294 aa9.46□□□□□ -0.9
SCAMP2-204ENST00000563829 BUB1B-PAK6H3BSN5 160 aa9.46□□□□□ -0.9
SCAMP2-204ENST00000563829 TSPEAR-AS2P59090 65 aa9.46□□□□□ -0.9
SCAMP2-204ENST00000563829 HERVK_113P61574 105 aa9.46□□□□□ -0.9
SCAMP2-204ENST00000563829 FAM27E3Q08E93 113 aa9.46□□□□□ -0.9
SCAMP2-204ENST00000563829 TCF15Q12870 199 aa9.46□□□□□ -0.9
SCAMP2-204ENST00000563829 TIMD4Q96H15 378 aa9.46□□□□□ -0.9
SCAMP2-204ENST00000563829 TRAV2A0A0B4J234 112 aa9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 C17orf100A8MU93 164 aa9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 DUSP14O95147 198 aaKnown RBP9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 MGPP08493 103 aa9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 SEM1Q6ZVN7 128 aa9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 AGPAT4-IT1Q9H0P7 198 aa9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 YAE1D1Q9NRH1 226 aa9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 PCNX1Q96RV3 2341 aa9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 ARHGAP32A7KAX9 2087 aa9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 TTC28Q96AY4 2481 aa9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 C14orf178Q8N769 122 aaPredicted RBP9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 C21orf62Q9NYP8 219 aa9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 VPREB3Q9UKI3 123 aa9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 SLC25A29Q8N8R3 303 aa9.45□□□□□ -0.9
SCAMP2-204ENST00000563829 CRYGDP07320 174 aa9.44□□□□□ -0.9
SCAMP2-204ENST00000563829 FOXC1Q12948 553 aa9.44□□□□□ -0.9
SCAMP2-204ENST00000563829 Q6Q795 121 aa9.44□□□□□ -0.9
SCAMP2-204ENST00000563829 F8W735 103 aaPredicted RBP9.44□□□□□ -0.9
SCAMP2-204ENST00000563829 TIMM23O14925 209 aa9.44□□□□□ -0.9
SCAMP2-204ENST00000563829 IGLV1-47P01700 117 aa9.44□□□□□ -0.9
SCAMP2-204ENST00000563829 ZNF56Q15929 161 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms