RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 SMIM12Q96EX1 92 aa11.68□□□□□ -0.54
USB1-204ENST00000561568 DERL1Q9BUN8 251 aa11.68□□□□□ -0.54
USB1-204ENST00000561568 GNRH2O43555 120 aa11.67□□□□□ -0.54
USB1-204ENST00000561568 GNG4P50150 75 aa11.67□□□□□ -0.54
USB1-204ENST00000561568 TCL1AP56279 114 aa11.67□□□□□ -0.54
USB1-204ENST00000561568 DAD1P61803 113 aa11.67□□□□□ -0.54
USB1-204ENST00000561568 ZNF415Q09FC8 603 aa11.67□□□□□ -0.54
USB1-204ENST00000561568 PHLDA1Q8WV24 401 aaPredicted RBP11.67□□□□□ -0.54
USB1-204ENST00000561568 SMDT1Q9H4I9 107 aa11.67□□□□□ -0.54
USB1-204ENST00000561568 RAB19A4D1S5 217 aa11.66□□□□□ -0.54
USB1-204ENST00000561568 ORM1P02763 201 aa11.66□□□□□ -0.54
USB1-204ENST00000561568 PEA15Q15121 130 aa11.66□□□□□ -0.54
USB1-204ENST00000561568 SPXQ9BT56 116 aa11.66□□□□□ -0.54
USB1-204ENST00000561568 BIN3Q9NQY0 253 aa11.66□□□□□ -0.54
USB1-204ENST00000561568 MDFICQ9P1T7 246 aa11.66□□□□□ -0.54
USB1-204ENST00000561568 C11orf21Q9P2W6 132 aa11.66□□□□□ -0.54
USB1-204ENST00000561568 TRAV10A0A0B4J240 114 aa11.65□□□□□ -0.54
USB1-204ENST00000561568 NUPR2A6NF83 97 aa11.65□□□□□ -0.54
USB1-204ENST00000561568 SH2D1AO60880 128 aa11.65□□□□□ -0.54
USB1-204ENST00000561568 DEFB130BP0DP73 79 aa11.65□□□□□ -0.54
USB1-204ENST00000561568 DEFB130AP0DP74 79 aa11.65□□□□□ -0.54
USB1-204ENST00000561568 IFITM2Q01629 132 aa11.65□□□□□ -0.54
USB1-204ENST00000561568 LGALS9BQ3B8N2 356 aa11.65□□□□□ -0.54
USB1-204ENST00000561568 CENPWQ5EE01 88 aa11.65□□□□□ -0.54
USB1-204ENST00000561568 CASC10Q5T4H9 136 aa11.65□□□□□ -0.54
USB1-204ENST00000561568 ZFAND6Q6FIF0 208 aa11.65□□□□□ -0.54
USB1-204ENST00000561568 CEMP1Q6PRD7 247 aaPredicted RBP11.65□□□□□ -0.54
USB1-204ENST00000561568 Q6ZTC4 211 aa11.65□□□□□ -0.54
USB1-204ENST00000561568 NHLRC2Q8NBF2 726 aa11.65□□□□□ -0.54
USB1-204ENST00000561568 IGKV3D-20A0A0C4DH25 116 aa11.64□□□□□ -0.55
USB1-204ENST00000561568 IGHV3-16A0A0C4DH30 117 aa11.64□□□□□ -0.55
USB1-204ENST00000561568 TYMSP04818 313 aa11.64□□□□□ -0.55
USB1-204ENST00000561568 PARLQ9H300 379 aa11.64□□□□□ -0.55
USB1-204ENST00000561568 KLK5Q9Y337 293 aaPredicted RBP11.64□□□□□ -0.55
USB1-204ENST00000561568 B4DEV8 164 aa11.63□□□□□ -0.55
USB1-204ENST00000561568 KRBOX1C9JBD0 128 aa11.63□□□□□ -0.55
USB1-204ENST00000561568 C9JCJ5 164 aa11.63□□□□□ -0.55
USB1-204ENST00000561568 SPINK4O60575 86 aa11.63□□□□□ -0.55
USB1-204ENST00000561568 IGLV2-8P01709 118 aa11.63□□□□□ -0.55
USB1-204ENST00000561568 SRP19P09132 144 aaKnown RBP11.63□□□□□ -0.55
USB1-204ENST00000561568 MGST1P10620 155 aaKnown RBP11.63□□□□□ -0.55
USB1-204ENST00000561568 CLLU1Q5K131 121 aa11.63□□□□□ -0.55
USB1-204ENST00000561568 LINC00612Q8N6U2 182 aa11.63□□□□□ -0.55
USB1-204ENST00000561568 DAZAP1Q96EP5 407 aaKnown RBP11.63□□□□□ -0.55
USB1-204ENST00000561568 DEFB131BA0A096LNP1 70 aa11.62□□□□□ -0.55
USB1-204ENST00000561568 GAGE12BA1L429 117 aa11.62□□□□□ -0.55
USB1-204ENST00000561568 GAGE7O76087 117 aa11.62□□□□□ -0.55
USB1-204ENST00000561568 GAGE12FP0CL80 117 aa11.62□□□□□ -0.55
USB1-204ENST00000561568 GAGE12GP0CL81 117 aa11.62□□□□□ -0.55
USB1-204ENST00000561568 GAGE12IP0CL82 117 aa11.62□□□□□ -0.55
USB1-204ENST00000561568 CEBPGP53567 150 aa11.62□□□□□ -0.55
USB1-204ENST00000561568 LINC01559Q495D7 138 aa11.62□□□□□ -0.55
USB1-204ENST00000561568 TRBV20OR9-2A0A075B6H5 130 aa11.61□□□□□ -0.55
USB1-204ENST00000561568 TRGV1A0A0A0MS02 117 aa11.61□□□□□ -0.55
USB1-204ENST00000561568 ATP5G1P05496 136 aa11.61□□□□□ -0.55
USB1-204ENST00000561568 S100A4P26447 101 aaKnown RBP11.61□□□□□ -0.55
USB1-204ENST00000561568 DNLZQ5SXM8 178 aa11.61□□□□□ -0.55
USB1-204ENST00000561568 PRR27Q6MZM9 219 aa11.61□□□□□ -0.55
USB1-204ENST00000561568 Q6ZTI0 123 aa11.61□□□□□ -0.55
USB1-204ENST00000561568 OCC1Q8TAD7 63 aa11.61□□□□□ -0.55
USB1-204ENST00000561568 RASL10AQ92737 203 aa11.61□□□□□ -0.55
USB1-204ENST00000561568 C18orf15Q96N68 181 aa11.61□□□□□ -0.55
USB1-204ENST00000561568 TRGV2A0A075B6R0 118 aa11.6□□□□□ -0.55
USB1-204ENST00000561568 M0R036 132 aa11.6□□□□□ -0.55
USB1-204ENST00000561568 M0R2P5 195 aa11.6□□□□□ -0.55
USB1-204ENST00000561568 ASIPP42127 132 aa11.6□□□□□ -0.55
USB1-204ENST00000561568 OR5I1Q13606 314 aa11.6□□□□□ -0.55
USB1-204ENST00000561568 FAM74A3Q4VXF1 159 aa11.6□□□□□ -0.55
USB1-204ENST00000561568 LY96Q9Y6Y9 160 aa11.6□□□□□ -0.55
USB1-204ENST00000561568 ZNF727A8MUV8 499 aa11.59□□□□□ -0.55
USB1-204ENST00000561568 PTH2Q96A98 100 aa11.59□□□□□ -0.55
USB1-204ENST00000561568 FAM210BQ96KR6 192 aa11.59□□□□□ -0.55
USB1-204ENST00000561568 SMIM7Q9BQ49 75 aa11.59□□□□□ -0.55
USB1-204ENST00000561568 C19orf71A6NCJ1 209 aa11.58□□□□□ -0.56
USB1-204ENST00000561568 PGPEP1LA6NFU8 196 aa11.58□□□□□ -0.56
USB1-204ENST00000561568 RNASE3P12724 160 aaKnown RBP11.58□□□□□ -0.56
USB1-204ENST00000561568 HTN3P15516 51 aa11.58□□□□□ -0.56
USB1-204ENST00000561568 TCTAP57738 103 aa11.58□□□□□ -0.56
USB1-204ENST00000561568 SRSF3P84103 164 aaKnown RBP11.58□□□□□ -0.56
USB1-204ENST00000561568 C9orf85Q96MD7 179 aa11.58□□□□□ -0.56
USB1-204ENST00000561568 NDUFAF3Q9BU61 184 aa11.58□□□□□ -0.56
USB1-204ENST00000561568 MRPL16Q9NX20 251 aaKnown RBP11.58□□□□□ -0.56
USB1-204ENST00000561568 IL36BQ9NZH7 164 aa11.58□□□□□ -0.56
USB1-204ENST00000561568 GRIFINA4D1Z8 144 aa11.57□□□□□ -0.56
USB1-204ENST00000561568 IGLL5B9A064 214 aa11.57□□□□□ -0.56
USB1-204ENST00000561568 C9JQL5 133 aa11.57□□□□□ -0.56
USB1-204ENST00000561568 CXCL1P09341 107 aa11.57□□□□□ -0.56
USB1-204ENST00000561568 RPS20P60866 119 aaKnown RBP11.57□□□□□ -0.56
USB1-204ENST00000561568 ZNF575Q86XF7 245 aa11.57□□□□□ -0.56
USB1-204ENST00000561568 TMSB15BA0A087X1C1 80 aa11.56□□□□□ -0.56
USB1-204ENST00000561568 XKRY2A2RUG3 117 aa11.56□□□□□ -0.56
USB1-204ENST00000561568 F5H768 121 aa11.56□□□□□ -0.56
USB1-204ENST00000561568 P01737 135 aa11.56□□□□□ -0.56
USB1-204ENST00000561568 ARMS2P0C7Q2 107 aa11.56□□□□□ -0.56
USB1-204ENST00000561568 TMEM241Q24JQ0 296 aa11.56□□□□□ -0.56
USB1-204ENST00000561568 ZNF876PQ49A33 203 aa11.56□□□□□ -0.56
USB1-204ENST00000561568 PIK3CD-AS1Q5SR53 167 aa11.56□□□□□ -0.56
USB1-204ENST00000561568 K7EN84 100 aa11.55□□□□□ -0.56
USB1-204ENST00000561568 SOHLH1Q5JUK2 328 aa11.55□□□□□ -0.56
USB1-204ENST00000561568 NUDT10Q8NFP7 164 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 2417.5 ms