RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 UTF1Q5T230 341 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 HCP5Q6MZN7 132 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 RASL11AQ6T310 242 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 SSX7Q7RTT5 188 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 LINC00305Q7Z4B0 112 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 LHFPL4Q7Z7J7 247 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 LINC01551Q86U37 167 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 BPIFA4PQ86YQ2 179 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 LINC00518Q8N0U6 118 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 TTC9CQ8N5M4 171 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 NHLRC2Q8NBF2 726 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 CMTM2Q8TAZ6 248 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 VN1R17PQ8TDU5 208 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 SRSF12Q8WXF0 261 aaKnown RBP2.35□□□□□ -2.03
SPG11-225ENST00000561391 ARPC1AQ92747 370 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 FRZBQ92765 325 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 ISOC2Q96AB3 205 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 RASL11BQ9BPW5 248 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 OSTCQ9NRP0 149 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 CLEC5AQ9NY25 188 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 EPDR1Q9UM22 224 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 HIGD1AQ9Y241 93 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 KLF12Q9Y4X4 402 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 RFNGQ9Y644 331 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 TNCP24821 2201 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 TRBV7-1A0A0A6YYK4 115 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 IGHV3-72A0A0B4J1Y9 119 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 A0A1B0GW15 77 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 FAM231BA6NCW3 169 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 NCBP2LA6PVI3 153 aaKnown RBP2.34□□□□□ -2.03
SPG11-225ENST00000561391 I3L2K1 104 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 HLA-DRB1P01911 266 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 IGLC1P0CG04 106 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 RPL7P18124 248 aaKnown RBP2.34□□□□□ -2.03
SPG11-225ENST00000561391 ORM2P19652 201 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 NPPCP23582 126 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 CD24P25063 80 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 CSN1S1P47710 185 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 NDUFA6P56556 154 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 UBE2G2P60604 165 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 UBE2G1P62253 170 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 PSG9Q00887 426 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 ZNF90Q03938 601 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 FABP9Q0Z7S8 132 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 PDE6HQ13956 83 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 DIAPH2-AS1Q14236 149 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 TMEM183BQ1AE95 376 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 KLK9Q2XQG4 91 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 COA6Q5JTJ3 125 aaKnown RBP2.34□□□□□ -2.03
SPG11-225ENST00000561391 C1orf194Q5T5A4 169 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 FAM162BQ5T6X4 162 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 SAMD13Q5VXD3 122 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 FAM231DQ6ZW35 169 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 MIR17HGQ75NE6 70 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 Q8N6K4 173 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 C5orf17Q8NAS9 161 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 NECAP1Q8NC96 275 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 OR11H1Q8NG94 326 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 OR1B1Q8NGR6 318 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 TMEM37Q8WXS4 190 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 FMC1Q96HJ9 113 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 FAM167A-AS1Q96KT0 104 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 PACRGQ96M98 296 aaPredicted RBP2.34□□□□□ -2.03
SPG11-225ENST00000561391 NOL4LQ96MY1 436 aaPredicted RBP2.34□□□□□ -2.03
SPG11-225ENST00000561391 GPR82Q96P67 336 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 ATG101Q9BSB4 218 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 SHANK2-AS3Q9BTD1 123 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 GNB1LQ9BYB4 327 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 FBXL15Q9H469 300 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 FNDC4Q9H6D8 234 aaPredicted RBP2.34□□□□□ -2.03
SPG11-225ENST00000561391 OTORQ9NRC9 128 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 ZNF355PQ9NSJ1 428 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 IL36BQ9NZH7 164 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 KLK9Q9UKQ9 250 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 ZFP30Q9Y2G7 519 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 YTHDF2Q9Y5A9 579 aaKnown RBP2.34□□□□□ -2.03
SPG11-225ENST00000561391 HILPDAQ9Y5L2 63 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 URGCP-MRPS24S4R325 110 aa2.34□□□□□ -2.03
SPG11-225ENST00000561391 IGLV11-55A0A075B6I3 123 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 IGLV7-46A0A075B6I9 117 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 IGKV1D-37A0A075B6S9 117 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 IGKV1OR2-108A0A075B7D4 117 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 TGIF2-C20orf24A0A0A6YYL0 155 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 ZNF320A2RRD8 509 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 XKRY2A2RUG3 117 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 PGPA6NDG6 321 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 ZNF98A6NK75 572 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 FAM223BA6NKX1 122 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 A8MWL6 223 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 IGLL5B9A064 214 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 E7EUB6 86 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 H3BUA1 57 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 FCN1O00602 326 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 PEX7O00628 323 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 OVOL1O14753 267 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 GNG7O60262 68 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 HIST1H2BKO60814 126 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 ZNF253O75346 499 aa2.33□□□□□ -2.04
SPG11-225ENST00000561391 SMR3BP02814 79 aaPredicted RBP2.33□□□□□ -2.04
SPG11-225ENST00000561391 TRGC2P03986 189 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms