RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	IL15RA	Q13261	267 aa		4.85	□□□□□ -1.63
MARK3-223	ENST00000561071	RAB31	Q13636	194 aa		4.85	□□□□□ -1.63
MARK3-223	ENST00000561071	CLINT1	Q14677	625 aa		4.85	□□□□□ -1.63
MARK3-223	ENST00000561071		Q6ZQT7	251 aa		4.85	□□□□□ -1.63
MARK3-223	ENST00000561071	ZNF493	Q6ZR52	646 aa		4.85	□□□□□ -1.63
MARK3-223	ENST00000561071		Q6ZRG5	221 aa		4.85	□□□□□ -1.63
MARK3-223	ENST00000561071		Q6ZTI0	123 aa		4.85	□□□□□ -1.63
MARK3-223	ENST00000561071	EXOC3-AS1	Q8N2X6	119 aa		4.85	□□□□□ -1.63
MARK3-223	ENST00000561071	C6orf223	Q8N319	242 aa		4.85	□□□□□ -1.63
MARK3-223	ENST00000561071	TMEM252	Q8N6L7	170 aa		4.85	□□□□□ -1.63
MARK3-223	ENST00000561071	TMEM263	Q8WUH6	116 aa	Known RBP	4.85	□□□□□ -1.63
MARK3-223	ENST00000561071	PXMP4	Q9Y6I8	212 aa		4.85	□□□□□ -1.63
MARK3-223	ENST00000561071	DNAH5	Q8TE73	4624 aa		4.85	□□□□□ -1.63
MARK3-223	ENST00000561071	HSPG2	P98160	4391 aa		4.85	□□□□□ -1.63
MARK3-223	ENST00000561071	TRBV19	A0A075B6N1	114 aa		4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	M6PR	P20645	277 aa		4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	FGF7	P21781	194 aa		4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	RNASE4	P34096	147 aa	Known RBP	4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	LEP	P41159	167 aa		4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	RPL29	P47914	159 aa	Known RBP	4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	SULT1A1	P50225	295 aa		4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	CD300C	Q08708	224 aa		4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	ESRG	Q1W209	222 aa		4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	CNPY1	Q3B7I2	92 aa		4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	LINC00612	Q8N6U2	182 aa		4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	OR1L4	Q8NGR5	311 aa		4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	BLNK	Q8WV28	456 aa		4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	AGPAT4-IT1	Q9H0P7	198 aa		4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	GPN1	Q9HCN4	374 aa	Predicted RBP	4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	LYRM2	Q9NU23	88 aa	Predicted RBP	4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	RNF24	Q9Y225	148 aa		4.84	□□□□□ -1.63
MARK3-223	ENST00000561071	APOB	P04114	4563 aa	Known RBP	4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	FAM240B	A0A1B0GVZ2	78 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	C16orf90	A8MZG2	172 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	IGKV2D-40	P01614	121 aa	Predicted RBP	4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	RLN2	P04090	185 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	PVALB	P20472	110 aa	Predicted RBP	4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	S100A11	P31949	105 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	BTN1A1	Q13410	526 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	GUK1	Q16774	197 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	STX12	Q86Y82	276 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	RXFP4	Q8TDU9	374 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	C2orf48	Q96LS8	159 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	LINC00479	Q96M42	142 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	FAM218A	Q96MZ4	157 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	PFDN5	Q99471	154 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	VGLL1	Q99990	258 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	C20orf144	Q9BQM9	153 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	SLC25A2	Q9BXI2	301 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	TP53TG3	Q9ULZ0	132 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	KLF12	Q9Y4X4	402 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	TIMM9	Q9Y5J7	89 aa		4.83	□□□□□ -1.64
MARK3-223	ENST00000561071	TRGV1	A0A0A0MS02	117 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	C7orf71	A4D174	169 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	ZNF324	O75467	553 aa	Predicted RBP	4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	EIF3G	O75821	320 aa	Known RBP eCLIP	4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	IGHV3-53	P01767	116 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	OR10J4	P0C629	311 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	HIST1H1E	P10412	219 aa	Known RBP	4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	KRTAP10-6	P60371	365 aa	Predicted RBP	4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	HBG1	P69891	147 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	HBG2	P69892	147 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	DAZ2	Q13117	558 aa	Known RBP	4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	LRRC37A5P	Q49AS3	106 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	PRR9	Q5T870	116 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	PET117	Q6UWS5	81 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	MIR17HG	Q75NE6	70 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	C11orf72	Q8NBR9	251 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	VSIG2	Q96IQ7	327 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	FAM167A-AS1	Q96KT0	104 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	FAM19A4	Q96LR4	140 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	ODF3	Q96PU9	254 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	PYGO2	Q9BRQ0	406 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	NPCDR1	Q9BY65	106 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	OR5AC2	Q9NZP5	309 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	TMEM14C	Q9P0S9	112 aa		4.82	□□□□□ -1.64
MARK3-223	ENST00000561071	IGLV7-46	A0A075B6I9	117 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	TRGV2	A0A075B6R0	118 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	C5orf52	A6NGY3	159 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	KLLN	B2CW77	178 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	SLC25A5	P05141	298 aa	Known RBP	4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	GPX1	P07203	203 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	NBEAP1	P0C6P0	100 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	FUS	P35637	526 aa	Known RBP eCLIP	4.81	□□□□□ -1.64	2e-6	■□□□□ 8.1
MARK3-223	ENST00000561071	IFITM3	Q01628	133 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	ATP6V1F	Q16864	119 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	SPATA12	Q7Z6I5	190 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	ZFAND2A	Q8N6M9	145 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	OR5C1	Q8NGR4	320 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071		Q8TAT8	98 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	LINC00477	Q96M19	166 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	CCDC32	Q9BV29	185 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	MRPL16	Q9NX20	251 aa	Known RBP	4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	NDUFA13	Q9P0J0	144 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071	FUT9	Q9Y231	359 aa		4.81	□□□□□ -1.64
MARK3-223	ENST00000561071		A0A096LPF7	62 aa		4.8	□□□□□ -1.64
MARK3-223	ENST00000561071	NDUFAF8	A1L188	74 aa		4.8	□□□□□ -1.64
MARK3-223	ENST00000561071	ZNF253	O75346	499 aa		4.8	□□□□□ -1.64

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