RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 ZNF491Q8N8L2 437 aa3.28□□□□□ -1.88
TMOD3-207ENST00000560549 SGMS2Q8NHU3 365 aa3.28□□□□□ -1.88
TMOD3-207ENST00000560549 OR5B12Q96R08 314 aa3.28□□□□□ -1.88
TMOD3-207ENST00000560549 PFDN5Q99471 154 aa3.28□□□□□ -1.88
TMOD3-207ENST00000560549 C12orf57Q99622 126 aa3.28□□□□□ -1.88
TMOD3-207ENST00000560549 FOXC2Q99958 501 aa3.28□□□□□ -1.88
TMOD3-207ENST00000560549 SLC25A39Q9BZJ4 359 aaPredicted RBP3.28□□□□□ -1.88
TMOD3-207ENST00000560549 GFRA4Q9GZZ7 299 aa3.28□□□□□ -1.88
TMOD3-207ENST00000560549 RNASE7Q9H1E1 156 aaKnown RBP3.28□□□□□ -1.88
TMOD3-207ENST00000560549 NAGKQ9UJ70 344 aa3.28□□□□□ -1.88
TMOD3-207ENST00000560549 EPDR1Q9UM22 224 aa3.28□□□□□ -1.88
TMOD3-207ENST00000560549 HIGD1AQ9Y241 93 aa3.28□□□□□ -1.88
TMOD3-207ENST00000560549 TBL2Q9Y4P3 447 aaKnown RBP3.28□□□□□ -1.88
TMOD3-207ENST00000560549 TSSC4Q9Y5U2 329 aaPredicted RBP3.28□□□□□ -1.88
TMOD3-207ENST00000560549 TNCP24821 2201 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 IGHV3OR16-8A0A075B7F1 116 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 A0A096LNT2 108 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 IGHV1-69DA0A0B4J2H0 117 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 FAM231BA6NCW3 169 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 G3V318 75 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 H3BRN7 92 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 PPP1R2P9O14990 202 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 NUPR1O60356 82 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 IGHV1-69P01742 117 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 HLA-DRB1P01911 266 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 CTSGP08311 255 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 NBEAP1P0C6P0 100 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 S100PP25815 95 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 GNG4P50150 75 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 TAS2R60P59551 318 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 KLK9Q2XQG4 91 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 PDZD11Q5EBL8 140 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 BRD3OSQ6XYD6 125 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 EXOC3-AS1Q8N2X6 119 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 BAALCQ8WXS3 180 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 IMMP2LQ96T52 175 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 RASL11BQ9BPW5 248 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 SHANK2-AS3Q9BTD1 123 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 Q9H3A6 140 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 IL36BQ9NZH7 164 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 TMEM14CQ9P0S9 112 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 KLK9Q9UKQ9 250 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 KLF12Q9Y4X4 402 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 SMAD5-AS1Q9Y6J3 95 aa3.27□□□□□ -1.89
TMOD3-207ENST00000560549 TRBV19A0A075B6N1 114 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 IGHV3-35A0A0C4DH35 117 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 OR2T8A6NH00 312 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 PPP5D1E7EU14 171 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 TGOLN2O43493 480 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 SPINK4O60575 86 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 OXTP01178 125 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 SLC25A5P05141 298 aaKnown RBP3.26□□□□□ -1.89
TMOD3-207ENST00000560549 IGLC2P0DOY2 106 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 HIST1H1EP10412 219 aaKnown RBP3.26□□□□□ -1.89
TMOD3-207ENST00000560549 MGST1P10620 155 aaKnown RBP3.26□□□□□ -1.89
TMOD3-207ENST00000560549 CBLN1P23435 193 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 LEPP41159 167 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 TCL1AP56279 114 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 YPEL3P61236 119 aaPredicted RBP3.26□□□□□ -1.89
TMOD3-207ENST00000560549 SLC35B1P78383 322 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 TMEM183BQ1AE95 376 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 Q56UQ5 140 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 ADAMTSL4-AS1Q5T5F5 129 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 GDF5OSQ5U4N7 250 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 UNQ5815/PRO19632Q6UWF5 114 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 Q6ZRP5 223 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 BAGE2Q86Y30 109 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 OR8I2Q8N0Y5 310 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 C5orf56Q8N8D9 126 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 ZNF502Q8TBZ5 544 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 C22orf15Q8WYQ4 148 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 RETNQ9HD89 108 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 OSTCQ9NRP0 149 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 C21orf62Q9NYP8 219 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 LINC00527Q9UJ94 153 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 TP53TG3Q9ULZ0 132 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 TRAPPC1Q9Y5R8 145 aa3.26□□□□□ -1.89
TMOD3-207ENST00000560549 TRAV8-1A0A0A6YYK1 113 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 TRAV40A0A0B4J280 105 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 SMIM27A0A1W2PRY6 76 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 CLPSL1A2RUU4 121 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 A6NDX4 124 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 F2Z2F3 143 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 GNG7O60262 68 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 LTAP01374 205 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 TCRAP04437 139 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 IL4P05112 153 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 FABP4P15090 132 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 HIST1H1BP16401 226 aaKnown RBP3.25□□□□□ -1.89
TMOD3-207ENST00000560549 HLA-DMBP28068 263 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 BRS3P32247 399 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 RHOGP84095 191 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 LY6EQ16553 131 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 ECSCRQ19T08 205 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 PYY3Q5JQD4 70 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 COA6Q5JTJ3 125 aaKnown RBP3.25□□□□□ -1.89
TMOD3-207ENST00000560549 TMEM136Q6ZRR5 245 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 TMEM256Q8N2U0 113 aa3.25□□□□□ -1.89
TMOD3-207ENST00000560549 MAPK1IP1LQ8NDC0 245 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms