RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 HTN3P15516 51 aa11□□□□□ -0.65
LYSMD2-204ENST00000560491 RPL35P42766 123 aaKnown RBP11□□□□□ -0.65
LYSMD2-204ENST00000560491 CRIP1P50238 77 aa11□□□□□ -0.65
LYSMD2-204ENST00000560491 ZNF415Q09FC8 603 aa11□□□□□ -0.65
LYSMD2-204ENST00000560491 DAZ2Q13117 558 aaKnown RBP11□□□□□ -0.65
LYSMD2-204ENST00000560491 TDRG1Q3Y452 100 aa11□□□□□ -0.65
LYSMD2-204ENST00000560491 IBA57Q5T440 356 aaKnown RBP11□□□□□ -0.65
LYSMD2-204ENST00000560491 Q6ZTI0 123 aa11□□□□□ -0.65
LYSMD2-204ENST00000560491 TENM2Q9NT68 2774 aa11□□□□□ -0.65
LYSMD2-204ENST00000560491 TRGV11A0A075B6L2 103 aa10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 GAGE12BA1L429 117 aa10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 PDE6DO43924 150 aa10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 GAGE7O76087 117 aa10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 S100A9P06702 114 aaKnown RBP10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 GAGE12FP0CL80 117 aa10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 GAGE12GP0CL81 117 aa10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 GAGE12IP0CL82 117 aa10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 TAGLN2P37802 199 aaKnown RBP10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 COX8CQ7Z4L0 72 aa10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 LINC00612Q8N6U2 182 aa10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 SDF2L1Q9HCN8 221 aa10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 KLK5Q9Y337 293 aaPredicted RBP10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 LYSTQ99698 3801 aa10.99□□□□□ -0.65
LYSMD2-204ENST00000560491 KMT2CQ8NEZ4 4911 aaKnown RBP10.98□□□□□ -0.65
LYSMD2-204ENST00000560491 IGHV3-16A0A0C4DH30 117 aa10.98□□□□□ -0.65
LYSMD2-204ENST00000560491 RBFOX3A6NFN3 312 aa10.98□□□□□ -0.65
LYSMD2-204ENST00000560491 SH2D1AO60880 128 aa10.98□□□□□ -0.65
LYSMD2-204ENST00000560491 BAGE2Q86Y30 109 aa10.98□□□□□ -0.65
LYSMD2-204ENST00000560491 KCNS1Q96KK3 526 aa10.98□□□□□ -0.65
LYSMD2-204ENST00000560491 MED9Q9NWA0 146 aa10.98□□□□□ -0.65
LYSMD2-204ENST00000560491 MRPL16Q9NX20 251 aaKnown RBP10.98□□□□□ -0.65
LYSMD2-204ENST00000560491 ALMS1Q8TCU4 4167 aa10.98□□□□□ -0.65
LYSMD2-204ENST00000560491 SACSQ9NZJ4 4579 aa10.97□□□□□ -0.65
LYSMD2-204ENST00000560491 TRGV1A0A0A0MS02 117 aa10.97□□□□□ -0.65
LYSMD2-204ENST00000560491 IGKV3D-20A0A0C4DH25 116 aa10.97□□□□□ -0.65
LYSMD2-204ENST00000560491 RAB19A4D1S5 217 aa10.97□□□□□ -0.65
LYSMD2-204ENST00000560491 FABP5P3A8MUU1 101 aa10.97□□□□□ -0.65
LYSMD2-204ENST00000560491 IGLL5B9A064 214 aa10.97□□□□□ -0.65
LYSMD2-204ENST00000560491 SPINK4O60575 86 aa10.97□□□□□ -0.65
LYSMD2-204ENST00000560491 CENPWQ5EE01 88 aa10.97□□□□□ -0.65
LYSMD2-204ENST00000560491 TOR2AQ5JU69 321 aa10.97□□□□□ -0.65
LYSMD2-204ENST00000560491 ZNF506Q5JVG8 444 aa10.97□□□□□ -0.65
LYSMD2-204ENST00000560491 M0R036 132 aa10.96□□□□□ -0.65
LYSMD2-204ENST00000560491 ZNF674Q2M3X9 581 aa10.96□□□□□ -0.65
LYSMD2-204ENST00000560491 FAM162BQ5T6X4 162 aa10.96□□□□□ -0.65
LYSMD2-204ENST00000560491 MLST8Q9BVC4 326 aa10.96□□□□□ -0.65
LYSMD2-204ENST00000560491 DNAH1Q9P2D7 4330 aa10.95□□□□□ -0.66
LYSMD2-204ENST00000560491 ORM1P02763 201 aa10.95□□□□□ -0.66
LYSMD2-204ENST00000560491 PRR27Q6MZM9 219 aa10.95□□□□□ -0.66
LYSMD2-204ENST00000560491 FAM210AQ96ND0 272 aa10.95□□□□□ -0.66
LYSMD2-204ENST00000560491 EIF5A2Q9GZV4 153 aaKnown RBP10.95□□□□□ -0.66
LYSMD2-204ENST00000560491 TRBV20OR9-2A0A075B6H5 130 aa10.94□□□□□ -0.66
LYSMD2-204ENST00000560491 IGHV4-4A0A075B6R2 117 aa10.94□□□□□ -0.66
LYSMD2-204ENST00000560491 PGPEP1LA6NFU8 196 aa10.94□□□□□ -0.66
LYSMD2-204ENST00000560491 B4DEV8 164 aa10.94□□□□□ -0.66
LYSMD2-204ENST00000560491 IGLV2-8P01709 118 aa10.94□□□□□ -0.66
LYSMD2-204ENST00000560491 ATP5G1P05496 136 aa10.94□□□□□ -0.66
LYSMD2-204ENST00000560491 SPXQ9BT56 116 aa10.94□□□□□ -0.66
LYSMD2-204ENST00000560491 TRGV2A0A075B6R0 118 aa10.93□□□□□ -0.66
LYSMD2-204ENST00000560491 TMSB15BA0A087X1C1 80 aa10.93□□□□□ -0.66
LYSMD2-204ENST00000560491 KRBOX1C9JBD0 128 aa10.93□□□□□ -0.66
LYSMD2-204ENST00000560491 F5H768 121 aa10.93□□□□□ -0.66
LYSMD2-204ENST00000560491 GNG4P50150 75 aa10.93□□□□□ -0.66
LYSMD2-204ENST00000560491 LGALS9BQ3B8N2 356 aa10.93□□□□□ -0.66
LYSMD2-204ENST00000560491 APLNQ9ULZ1 77 aa10.93□□□□□ -0.66
LYSMD2-204ENST00000560491 GRIFINA4D1Z8 144 aa10.92□□□□□ -0.66
LYSMD2-204ENST00000560491 MGST1P10620 155 aaKnown RBP10.92□□□□□ -0.66
LYSMD2-204ENST00000560491 RNASE3P12724 160 aaKnown RBP10.92□□□□□ -0.66
LYSMD2-204ENST00000560491 HOXA5P20719 270 aa10.92□□□□□ -0.66
LYSMD2-204ENST00000560491 CEBPGP53567 150 aa10.92□□□□□ -0.66
LYSMD2-204ENST00000560491 RPL19P84098 196 aaKnown RBP10.92□□□□□ -0.66
LYSMD2-204ENST00000560491 LINC01559Q495D7 138 aa10.92□□□□□ -0.66
LYSMD2-204ENST00000560491 TMEM88Q6PEY1 159 aa10.92□□□□□ -0.66
LYSMD2-204ENST00000560491 C9orf85Q96MD7 179 aa10.92□□□□□ -0.66
LYSMD2-204ENST00000560491 PARLQ9H300 379 aa10.92□□□□□ -0.66
LYSMD2-204ENST00000560491 MUC4Q99102 2169 aa10.92□□□□□ -0.66
LYSMD2-204ENST00000560491 TMEM250H0YL14 139 aa10.91□□□□□ -0.66
LYSMD2-204ENST00000560491 M0R2P5 195 aa10.91□□□□□ -0.66
LYSMD2-204ENST00000560491 IGHV3-53P01767 116 aa10.91□□□□□ -0.66
LYSMD2-204ENST00000560491 ASIPP42127 132 aa10.91□□□□□ -0.66
LYSMD2-204ENST00000560491 ZNF575Q86XF7 245 aa10.91□□□□□ -0.66
LYSMD2-204ENST00000560491 C18orf15Q96N68 181 aa10.91□□□□□ -0.66
LYSMD2-204ENST00000560491 H3BVH4 76 aa10.9□□□□□ -0.66
LYSMD2-204ENST00000560491 SRP19P09132 144 aaKnown RBP10.9□□□□□ -0.66
LYSMD2-204ENST00000560491 S100A4P26447 101 aaKnown RBP10.9□□□□□ -0.66
LYSMD2-204ENST00000560491 OR5I1Q13606 314 aa10.9□□□□□ -0.66
LYSMD2-204ENST00000560491 RASL10AQ92737 203 aa10.9□□□□□ -0.66
LYSMD2-204ENST00000560491 NDUFAF3Q9BU61 184 aa10.9□□□□□ -0.66
LYSMD2-204ENST00000560491 LCE6AA0A183 80 aa10.89□□□□□ -0.67
LYSMD2-204ENST00000560491 C9JCJ5 164 aa10.89□□□□□ -0.67
LYSMD2-204ENST00000560491 IFITM2Q01629 132 aa10.89□□□□□ -0.67
LYSMD2-204ENST00000560491 SMIM12Q96EX1 92 aa10.89□□□□□ -0.67
LYSMD2-204ENST00000560491 VPS13DQ5THJ4 4388 aa10.88□□□□□ -0.67
LYSMD2-204ENST00000560491 NACAE9PAV3 2078 aa10.88□□□□□ -0.67
LYSMD2-204ENST00000560491 SFTA3P0C7M3 94 aa10.88□□□□□ -0.67
LYSMD2-204ENST00000560491 TCTAP57738 103 aa10.88□□□□□ -0.67
LYSMD2-204ENST00000560491 SRSF3P84103 164 aaKnown RBP10.88□□□□□ -0.67
LYSMD2-204ENST00000560491 POM121L12Q8N7R1 296 aa10.88□□□□□ -0.67
LYSMD2-204ENST00000560491 LINC00476Q8WZB0 136 aa10.88□□□□□ -0.67
LYSMD2-204ENST00000560491 FAM210BQ96KR6 192 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms