RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 RNF222A6NCQ9 220 aa10.81□□□□□ -0.68
HERC1-207ENST00000560316 TYMSP04818 313 aa10.81□□□□□ -0.68
HERC1-207ENST00000560316 CSN1S1P47710 185 aa10.81□□□□□ -0.68
HERC1-207ENST00000560316 CHAC2Q8WUX2 184 aa10.81□□□□□ -0.68
HERC1-207ENST00000560316 FXYD5Q96DB9 178 aa10.81□□□□□ -0.68
HERC1-207ENST00000560316 DNAJC30Q96LL9 226 aa10.81□□□□□ -0.68
HERC1-207ENST00000560316 OR51M1Q9H341 326 aa10.81□□□□□ -0.68
HERC1-207ENST00000560316 TRBV6-4A0A1B0GX49 114 aa10.8□□□□□ -0.68
HERC1-207ENST00000560316 C5orf51A6NDU8 294 aa10.8□□□□□ -0.68
HERC1-207ENST00000560316 IGLV2-11P01706 119 aa10.8□□□□□ -0.68
HERC1-207ENST00000560316 CFAP126Q5VTH2 177 aa10.8□□□□□ -0.68
HERC1-207ENST00000560316 DPPA3Q6W0C5 159 aa10.8□□□□□ -0.68
HERC1-207ENST00000560316 MRPS26Q9BYN8 205 aaKnown RBP10.8□□□□□ -0.68
HERC1-207ENST00000560316 C11orf1Q9H5F2 150 aa10.8□□□□□ -0.68
HERC1-207ENST00000560316 GGTLC3B5MD39 225 aa10.79□□□□□ -0.68
HERC1-207ENST00000560316 RANP62826 216 aaKnown RBP10.79□□□□□ -0.68
HERC1-207ENST00000560316 TOR2AQ5JU69 321 aa10.79□□□□□ -0.68
HERC1-207ENST00000560316 MITD1Q8WV92 249 aa10.79□□□□□ -0.68
HERC1-207ENST00000560316 PAXXQ9BUH6 204 aa10.79□□□□□ -0.68
HERC1-207ENST00000560316 COX11Q9Y6N1 276 aa10.79□□□□□ -0.68
HERC1-207ENST00000560316 IGKV2D-24A0A075B6R9 120 aa10.78□□□□□ -0.68
HERC1-207ENST00000560316 IGSF23A1L1A6 192 aa10.78□□□□□ -0.68
HERC1-207ENST00000560316 S100A11P31949 105 aa10.78□□□□□ -0.68
HERC1-207ENST00000560316 SULT1A1P50225 295 aa10.78□□□□□ -0.68
HERC1-207ENST00000560316 TMBIM6P55061 237 aa10.78□□□□□ -0.68
HERC1-207ENST00000560316 NPCDR1Q9BY65 106 aa10.78□□□□□ -0.68
HERC1-207ENST00000560316 LENEPQ9Y5L5 61 aa10.78□□□□□ -0.68
HERC1-207ENST00000560316 TNXBP22105 4242 aa10.78□□□□□ -0.68
HERC1-207ENST00000560316 FAM25EA8MYX2 175 aa10.77□□□□□ -0.69
HERC1-207ENST00000560316 DIRC3C9JPN6 131 aa10.77□□□□□ -0.69
HERC1-207ENST00000560316 ZNF876PQ49A33 203 aa10.77□□□□□ -0.69
HERC1-207ENST00000560316 SDF2L1Q9HCN8 221 aa10.77□□□□□ -0.69
HERC1-207ENST00000560316 F6UZH7 168 aa10.76□□□□□ -0.69
HERC1-207ENST00000560316 H3BMQ9 156 aa10.76□□□□□ -0.69
HERC1-207ENST00000560316 TMEM252Q8N6L7 170 aa10.76□□□□□ -0.69
HERC1-207ENST00000560316 RMI2Q96E14 147 aa10.76□□□□□ -0.69
HERC1-207ENST00000560316 BCL7BQ9BQE9 202 aa10.76□□□□□ -0.69
HERC1-207ENST00000560316 LYRM2Q9NU23 88 aaPredicted RBP10.76□□□□□ -0.69
HERC1-207ENST00000560316 TRAV21A0A0B4J279 112 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 GAGE12JA6NER3 117 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 NAP1L6A6NFF2 107 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 ASIPP42127 132 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 HBG1P69891 147 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 HBG2P69892 147 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 GAGE1Q13065 139 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 GAGE4Q13068 117 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 GAGE5Q13069 117 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 GAGE13Q4V321 117 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 THAP6Q8TBB0 222 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 HYLS1Q96M11 299 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 ATP5SQ99766 215 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 RPH3ALQ9UNE2 315 aa10.75□□□□□ -0.69
HERC1-207ENST00000560316 OR7C2O60412 319 aa10.74□□□□□ -0.69
HERC1-207ENST00000560316 CIDEAO60543 219 aa10.74□□□□□ -0.69
HERC1-207ENST00000560316 S100A10P60903 97 aa10.74□□□□□ -0.69
HERC1-207ENST00000560316 STX12Q86Y82 276 aa10.74□□□□□ -0.69
HERC1-207ENST00000560316 ASB13Q8WXK3 278 aa10.74□□□□□ -0.69
HERC1-207ENST00000560316 TRAV8-1A0A0A6YYK1 113 aa10.73□□□□□ -0.69
HERC1-207ENST00000560316 LINC00694P0DN24 101 aa10.73□□□□□ -0.69
HERC1-207ENST00000560316 MGST1P10620 155 aaKnown RBP10.73□□□□□ -0.69
HERC1-207ENST00000560316 PVALBP20472 110 aaPredicted RBP10.73□□□□□ -0.69
HERC1-207ENST00000560316 BTCP35070 178 aa10.73□□□□□ -0.69
HERC1-207ENST00000560316 INPP1P49441 399 aa10.73□□□□□ -0.69
HERC1-207ENST00000560316 ATP6V1FQ16864 119 aa10.73□□□□□ -0.69
HERC1-207ENST00000560316 SPANXN2Q5MJ10 180 aa10.73□□□□□ -0.69
HERC1-207ENST00000560316 TMED6Q8WW62 240 aa10.73□□□□□ -0.69
HERC1-207ENST00000560316 TVP23CQ96ET8 276 aa10.73□□□□□ -0.69
HERC1-207ENST00000560316 KCNS1Q96KK3 526 aa10.73□□□□□ -0.69
HERC1-207ENST00000560316 KLK12Q9UKR0 248 aa10.73□□□□□ -0.69
HERC1-207ENST00000560316 PGPEP1LA6NFU8 196 aa10.72□□□□□ -0.69
HERC1-207ENST00000560316 NOL3O60936 208 aaKnown RBP10.72□□□□□ -0.69
HERC1-207ENST00000560316 UBE2L3P68036 154 aaKnown RBP10.72□□□□□ -0.69
HERC1-207ENST00000560316 ZNF506Q5JVG8 444 aa10.72□□□□□ -0.69
HERC1-207ENST00000560316 Q9UF83 564 aa10.72□□□□□ -0.69
HERC1-207ENST00000560316 S100A5P33763 92 aa10.71□□□□□ -0.69
HERC1-207ENST00000560316 Q6ZRU5 148 aa10.71□□□□□ -0.69
HERC1-207ENST00000560316 UBE2WQ96B02 151 aa10.71□□□□□ -0.69
HERC1-207ENST00000560316 SH3BGRL3Q9H299 93 aa10.71□□□□□ -0.69
HERC1-207ENST00000560316 TREM1Q9NP99 234 aa10.71□□□□□ -0.69
HERC1-207ENST00000560316 URGCP-MRPS24S4R325 110 aa10.71□□□□□ -0.69
HERC1-207ENST00000560316 RAB32Q13637 225 aa10.7□□□□□ -0.7
HERC1-207ENST00000560316 TRIQKQ629K1 86 aa10.7□□□□□ -0.7
HERC1-207ENST00000560316 GOLT1AQ6ZVE7 132 aa10.7□□□□□ -0.7
HERC1-207ENST00000560316 NIT1Q86X76 327 aa10.7□□□□□ -0.7
HERC1-207ENST00000560316 CYB561D1Q8N8Q1 229 aa10.7□□□□□ -0.7
HERC1-207ENST00000560316 C2orf50Q96LR7 162 aa10.7□□□□□ -0.7
HERC1-207ENST00000560316 C9orf85Q96MD7 179 aa10.7□□□□□ -0.7
HERC1-207ENST00000560316 SAMD10Q9BYL1 202 aa10.7□□□□□ -0.7
HERC1-207ENST00000560316 NMES1Q9C002 83 aa10.7□□□□□ -0.7
HERC1-207ENST00000560316 C11orf21Q9P2W6 132 aa10.7□□□□□ -0.7
HERC1-207ENST00000560316 PGPA6NDG6 321 aa10.69□□□□□ -0.7
HERC1-207ENST00000560316 OR2T35Q8NGX2 323 aa10.69□□□□□ -0.7
HERC1-207ENST00000560316 A0A087WWC5 75 aa10.68□□□□□ -0.7
HERC1-207ENST00000560316 EIF3GO75821 320 aaKnown RBP eCLIP10.68□□□□□ -0.7
HERC1-207ENST00000560316 NHLH2Q02577 135 aa10.68□□□□□ -0.7
HERC1-207ENST00000560316 C14orf177Q52M58 125 aa10.68□□□□□ -0.7
HERC1-207ENST00000560316 CMTM2Q8TAZ6 248 aa10.68□□□□□ -0.7
HERC1-207ENST00000560316 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.68□□□□□ -0.7
HERC1-207ENST00000560316 SEC11BP0C7V7 166 aa10.67□□□□□ -0.7
HERC1-207ENST00000560316 ZNF80P51504 273 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms