RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 SNRPD3P62318 126 aaKnown RBP4.09□□□□□ -1.75
USP3-215ENST00000559771 RPL23P62829 140 aaKnown RBP4.09□□□□□ -1.75
USP3-215ENST00000559771 ZNF90Q03938 601 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 GAMTQ14353 236 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 FAM222AQ5U5X8 452 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 AMTNQ6UX39 209 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 SSX7Q7RTT5 188 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 C11orf52Q96A22 123 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 RNF125Q96EQ8 232 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 ACY3Q96HD9 319 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 UHRF2Q96PU4 802 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 C1QTNF4Q9BXJ3 329 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 MRPL32Q9BYC8 188 aaKnown RBP4.09□□□□□ -1.75
USP3-215ENST00000559771 PARLQ9H300 379 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 APOBP04114 4563 aaKnown RBP4.09□□□□□ -1.75
USP3-215ENST00000559771 A0A0J9YX75 114 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 A0A1W2PRE2 83 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 PLAC8L1A1L4L8 177 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 S100A2P29034 98 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 GCHFRP30047 84 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 GALR1P47211 349 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 NUTF2P61970 127 aaKnown RBP4.08□□□□□ -1.76
USP3-215ENST00000559771 FABP9Q0Z7S8 132 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 ADIRFQ15847 76 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 ZNF674Q2M3X9 581 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 COA6Q5JTJ3 125 aaKnown RBP4.08□□□□□ -1.76
USP3-215ENST00000559771 FOXI2Q6ZQN5 318 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 OR1L4Q8NGR5 311 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 PFDN5Q99471 154 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 C12orf57Q99622 126 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 FUT9Q9Y231 359 aa4.08□□□□□ -1.76
USP3-215ENST00000559771 IGHV3OR16-12A0A075B7B8 117 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 TMEM189A5PLL7 270 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 CRXO43186 299 aaPredicted RBP4.07□□□□□ -1.76
USP3-215ENST00000559771 HIST1H2BKO60814 126 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 SCGB2A1O75556 95 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 EIF3GO75821 320 aaKnown RBP eCLIP4.07□□□□□ -1.76
USP3-215ENST00000559771 HIST1H2BJP06899 126 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 OR5G3P0C626 314 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 OR10J4P0C629 311 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 LINC00869P0C866 280 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 ARL14EPLP0DKL9 152 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 HIST1H2BOP23527 126 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 HIST1H2BBP33778 126 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 RPL35P42766 123 aaKnown RBP4.07□□□□□ -1.76
USP3-215ENST00000559771 HIST1H2BDP58876 126 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 HIST1H2BCP62807 126 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 HIST2H2BEQ16778 126 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 COX19Q49B96 90 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.07□□□□□ -1.76
USP3-215ENST00000559771 C1orf194Q5T5A4 169 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 FAM78BQ5VT40 261 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 CST9LP1Q5W188 147 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 MIC13Q5XKP0 118 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 S100A7AQ86SG5 101 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 LINC01551Q86U37 167 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 IQCF2Q8IXL9 164 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 ZFP82Q8N141 532 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 THAP8Q8NA92 274 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 OR4B1Q8NGF8 309 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 HIST1H2BHQ93079 126 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 SMIM12Q96EX1 92 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 HIST1H2BNQ99877 126 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 HIST1H2BMQ99879 126 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 DNAJC4Q9NNZ3 241 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 YTHDF2Q9Y5A9 579 aaKnown RBP4.07□□□□□ -1.76
USP3-215ENST00000559771 DNAH5Q8TE73 4624 aa4.07□□□□□ -1.76
USP3-215ENST00000559771 TGIF2-C20orf24A0A0A6YYL0 155 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 TRAV8-2A0A0B4J237 113 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 ISLRO14498 428 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 PHOX2AO14813 284 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 NDUFB4O95168 129 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 TRGC2P03986 189 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 FABP1P07148 127 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 CXCL1P09341 107 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 HTN3P15516 51 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 TAS2R60P59551 318 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 PSG9Q00887 426 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 SFRP2Q96HF1 295 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 TRGV9Q99603 122 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 OR51M1Q9H341 326 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 RNF24Q9Y225 148 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 URGCP-MRPS24S4R325 110 aa4.06□□□□□ -1.76
USP3-215ENST00000559771 ZNF705GA8MUZ8 300 aaPredicted RBP4.05□□□□□ -1.76
USP3-215ENST00000559771 AZU1P20160 251 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 GATA2P23769 480 aaPredicted RBP4.05□□□□□ -1.76
USP3-215ENST00000559771 ID1P41134 155 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 NDUFA6P56556 154 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 PLP1P60201 277 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 LYZP61626 148 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 GCSAMLQ5JQS6 135 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 C1orf134Q5TEV5 83 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 SPATA31B1PQ5VZV4 182 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 RASL11AQ6T310 242 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 UBE2DNLQ8IWF7 75 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 TMEM183AQ8IXX5 376 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 OR10G8Q8NGN5 311 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 ZNRF2Q8NHG8 242 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 IGF2BP2-AS1Q96M15 143 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms