RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 UBE2L3P68036 154 aaKnown RBP8.81□□□□□ -1
TPM1-220ENST00000559556 TCTE3Q8IZS6 198 aa8.81□□□□□ -1
TPM1-220ENST00000559556 OR5AC2Q9NZP5 309 aa8.81□□□□□ -1
TPM1-220ENST00000559556 LRCOL1A6NCL2 159 aa8.8□□□□□ -1
TPM1-220ENST00000559556 C17orf112F2Z3M2 114 aa8.8□□□□□ -1
TPM1-220ENST00000559556 SMR3BP02814 79 aaPredicted RBP8.8□□□□□ -1
TPM1-220ENST00000559556 TIRAPP58753 221 aa8.8□□□□□ -1
TPM1-220ENST00000559556 KHDC3LQ587J8 217 aa8.8□□□□□ -1
TPM1-220ENST00000559556 SH2D6Q7Z4S9 175 aa8.8□□□□□ -1
TPM1-220ENST00000559556 OR2T35Q8NGX2 323 aa8.8□□□□□ -1
TPM1-220ENST00000559556 NTN5Q8WTR8 489 aaPredicted RBP8.8□□□□□ -1
TPM1-220ENST00000559556 TMEM70Q9BUB7 260 aa8.8□□□□□ -1
TPM1-220ENST00000559556 PKHD1L1Q86WI1 4243 aa8.79□□□□□ -1
TPM1-220ENST00000559556 LOC100131303A0A0U1RQF7 123 aa8.79□□□□□ -1
TPM1-220ENST00000559556 H0YIZ8 118 aa8.79□□□□□ -1
TPM1-220ENST00000559556 M0R2P5 195 aa8.79□□□□□ -1
TPM1-220ENST00000559556 LINC01556Q5JQF7 62 aa8.79□□□□□ -1
TPM1-220ENST00000559556 OR4C5Q8NGB2 326 aa8.79□□□□□ -1
TPM1-220ENST00000559556 PPP1R1CQ8WVI7 109 aa8.79□□□□□ -1
TPM1-220ENST00000559556 IGHV3-16A0A0C4DH30 117 aa8.78□□□□□ -1
TPM1-220ENST00000559556 IGHV3-38A0A0C4DH36 116 aa8.78□□□□□ -1
TPM1-220ENST00000559556 FAM229AH3BQW9 127 aa8.78□□□□□ -1
TPM1-220ENST00000559556 MPC2O95563 127 aa8.78□□□□□ -1
TPM1-220ENST00000559556 GATA1P15976 413 aaPredicted RBP8.78□□□□□ -1
TPM1-220ENST00000559556 LRRC37A5PQ49AS3 106 aa8.78□□□□□ -1
TPM1-220ENST00000559556 ATP5SQ99766 215 aa8.78□□□□□ -1
TPM1-220ENST00000559556 NAGKQ9UJ70 344 aa8.78□□□□□ -1
TPM1-220ENST00000559556 BOLA1Q9Y3E2 137 aa8.78□□□□□ -1
TPM1-220ENST00000559556 IGLV5-52A0A0A0MRZ9 124 aa8.77□□□□□ -1.01
TPM1-220ENST00000559556 PSCAO43653 123 aa8.77□□□□□ -1.01
TPM1-220ENST00000559556 TYMSP04818 313 aa8.77□□□□□ -1.01
TPM1-220ENST00000559556 TAS2R45P59539 299 aa8.77□□□□□ -1.01
TPM1-220ENST00000559556 HAMPP81172 84 aa8.77□□□□□ -1.01
TPM1-220ENST00000559556 FFAR4Q5NUL3 377 aa8.77□□□□□ -1.01
TPM1-220ENST00000559556 Q6ZSN1 163 aa8.77□□□□□ -1.01
TPM1-220ENST00000559556 NHLRC2Q8NBF2 726 aa8.77□□□□□ -1.01
TPM1-220ENST00000559556 HYLS1Q96M11 299 aa8.77□□□□□ -1.01
TPM1-220ENST00000559556 OTORQ9NRC9 128 aa8.77□□□□□ -1.01
TPM1-220ENST00000559556 TRAV21A0A0B4J279 112 aa8.76□□□□□ -1.01
TPM1-220ENST00000559556 IBA57-AS1B1ANH7 110 aa8.76□□□□□ -1.01
TPM1-220ENST00000559556 GNRH2O43555 120 aa8.76□□□□□ -1.01
TPM1-220ENST00000559556 C1QBP02746 253 aa8.76□□□□□ -1.01
TPM1-220ENST00000559556 PPT1P50897 306 aa8.76□□□□□ -1.01
TPM1-220ENST00000559556 ZFP69Q49AA0 526 aa8.76□□□□□ -1.01
TPM1-220ENST00000559556 ARL6IP6Q8N6S5 226 aa8.76□□□□□ -1.01
TPM1-220ENST00000559556 HMSDA8MTL9 139 aa8.75□□□□□ -1.01
TPM1-220ENST00000559556 FAM74A1Q5RGS3 127 aa8.75□□□□□ -1.01
TPM1-220ENST00000559556 Q8N814 137 aa8.75□□□□□ -1.01
TPM1-220ENST00000559556 INO80EQ8NBZ0 244 aaPredicted RBP8.75□□□□□ -1.01
TPM1-220ENST00000559556 CMTM2Q8TAZ6 248 aa8.75□□□□□ -1.01
TPM1-220ENST00000559556 TVP23CQ96ET8 276 aa8.75□□□□□ -1.01
TPM1-220ENST00000559556 KCNS1Q96KK3 526 aa8.75□□□□□ -1.01
TPM1-220ENST00000559556 SDF2L1Q9HCN8 221 aa8.75□□□□□ -1.01
TPM1-220ENST00000559556 RPH3ALQ9UNE2 315 aa8.75□□□□□ -1.01
TPM1-220ENST00000559556 HSPB11Q9Y547 144 aa8.75□□□□□ -1.01
TPM1-220ENST00000559556 LRP1Q07954 4544 aaKnown RBP8.74□□□□□ -1.01
TPM1-220ENST00000559556 PGPA6NDG6 321 aa8.74□□□□□ -1.01
TPM1-220ENST00000559556 FBLL1A6NHQ2 334 aaKnown RBP8.74□□□□□ -1.01
TPM1-220ENST00000559556 F6UZH7 168 aa8.74□□□□□ -1.01
TPM1-220ENST00000559556 PFN1P07737 140 aaKnown RBP8.74□□□□□ -1.01
TPM1-220ENST00000559556 LAGE3Q14657 143 aa8.74□□□□□ -1.01
TPM1-220ENST00000559556 PQLC2Q6ZP29 291 aa8.74□□□□□ -1.01
TPM1-220ENST00000559556 GOLT1AQ6ZVE7 132 aa8.74□□□□□ -1.01
TPM1-220ENST00000559556 SLC25A29Q8N8R3 303 aa8.74□□□□□ -1.01
TPM1-220ENST00000559556 TREM1Q9NP99 234 aa8.74□□□□□ -1.01
TPM1-220ENST00000559556 MBD2Q9UBB5 411 aa8.74□□□□□ -1.01
TPM1-220ENST00000559556 FXYD6-FXYD2A0A087WZ82 144 aa8.73□□□□□ -1.01
TPM1-220ENST00000559556 TRAV8-1A0A0A6YYK1 113 aa8.73□□□□□ -1.01
TPM1-220ENST00000559556 TRAV8-6A0A0B4J262 113 aa8.73□□□□□ -1.01
TPM1-220ENST00000559556 CIDEAO60543 219 aa8.73□□□□□ -1.01
TPM1-220ENST00000559556 RHOHQ15669 191 aa8.73□□□□□ -1.01
TPM1-220ENST00000559556 Q9HAA7 133 aa8.73□□□□□ -1.01
TPM1-220ENST00000559556 FAT3Q8TDW7 4589 aa8.73□□□□□ -1.01
TPM1-220ENST00000559556 TRBV6-4A0A1B0GX49 114 aa8.72□□□□□ -1.01
TPM1-220ENST00000559556 RS1O15537 224 aa8.72□□□□□ -1.01
TPM1-220ENST00000559556 EIF3GO75821 320 aaKnown RBP eCLIP8.72□□□□□ -1.01
TPM1-220ENST00000559556 ZNF876PQ49A33 203 aa8.72□□□□□ -1.01
TPM1-220ENST00000559556 Q5BKY6 102 aa8.72□□□□□ -1.01
TPM1-220ENST00000559556 OR10J3Q5JRS4 329 aa8.72□□□□□ -1.01
TPM1-220ENST00000559556 LELP1Q5T871 98 aa8.72□□□□□ -1.01
TPM1-220ENST00000559556 CFAP126Q5VTH2 177 aa8.72□□□□□ -1.01
TPM1-220ENST00000559556 SCGB1C1Q8TD33 95 aa8.72□□□□□ -1.01
TPM1-220ENST00000559556 PRADC1Q9BSG0 188 aa8.72□□□□□ -1.01
TPM1-220ENST00000559556 FAM30AQ9NZY2 134 aa8.72□□□□□ -1.01
TPM1-220ENST00000559556 A0A0D9SG52 128 aa8.71□□□□□ -1.02
TPM1-220ENST00000559556 G3V3Q6 166 aa8.71□□□□□ -1.02
TPM1-220ENST00000559556 SMLR1H3BR10 107 aa8.71□□□□□ -1.02
TPM1-220ENST00000559556 RPL12P30050 165 aaKnown RBP8.71□□□□□ -1.02
TPM1-220ENST00000559556 DPPA3Q6W0C5 159 aa8.71□□□□□ -1.02
TPM1-220ENST00000559556 Q6ZSA8 131 aa8.71□□□□□ -1.02
TPM1-220ENST00000559556 C9orf85Q96MD7 179 aa8.71□□□□□ -1.02
TPM1-220ENST00000559556 AQP10Q96PS8 301 aa8.71□□□□□ -1.02
TPM1-220ENST00000559556 SMIM3Q9BZL3 60 aa8.71□□□□□ -1.02
TPM1-220ENST00000559556 C11orf21Q9P2W6 132 aa8.71□□□□□ -1.02
TPM1-220ENST00000559556 TNFSF18Q9UNG2 199 aa8.71□□□□□ -1.02
TPM1-220ENST00000559556 SERTM2A0A1B0GWG4 89 aa8.7□□□□□ -1.02
TPM1-220ENST00000559556 TAAR5O14804 337 aa8.7□□□□□ -1.02
TPM1-220ENST00000559556 ARPC5O15511 151 aa8.7□□□□□ -1.02
TPM1-220ENST00000559556 IGHV3-30P01768 117 aa8.7□□□□□ -1.02
TPM1-220ENST00000559556 IGHV3-33P01772 117 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms