RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MED9Q9NWA0 146 aa7.73□□□□□ -1.17
TPM1-217ENST00000559108 ZFP30Q9Y2G7 519 aa7.73□□□□□ -1.17
TPM1-217ENST00000559108 CBY3A6NI87 242 aa7.72□□□□□ -1.17
TPM1-217ENST00000559108 K7EN84 100 aa7.72□□□□□ -1.17
TPM1-217ENST00000559108 PDE6DO43924 150 aa7.72□□□□□ -1.17
TPM1-217ENST00000559108 TCL1AP56279 114 aa7.72□□□□□ -1.17
TPM1-217ENST00000559108 ZNF493Q6ZR52 646 aa7.72□□□□□ -1.17
TPM1-217ENST00000559108 Q6ZTI0 123 aa7.72□□□□□ -1.17
TPM1-217ENST00000559108 BAGE2Q86Y30 109 aa7.72□□□□□ -1.17
TPM1-217ENST00000559108 TXNDC17Q9BRA2 123 aa7.72□□□□□ -1.17
TPM1-217ENST00000559108 PARLQ9H300 379 aa7.72□□□□□ -1.17
TPM1-217ENST00000559108 TENM2Q9NT68 2774 aa7.71□□□□□ -1.17
TPM1-217ENST00000559108 TMEM189A5PLL7 270 aa7.71□□□□□ -1.18
TPM1-217ENST00000559108 CXorf65A6NEN9 183 aa7.71□□□□□ -1.18
TPM1-217ENST00000559108 M0R036 132 aa7.71□□□□□ -1.18
TPM1-217ENST00000559108 SPART-AS1P0CW21 52 aa7.71□□□□□ -1.18
TPM1-217ENST00000559108 RNASE3P12724 160 aaKnown RBP7.71□□□□□ -1.18
TPM1-217ENST00000559108 CASC10Q5T4H9 136 aa7.71□□□□□ -1.18
TPM1-217ENST00000559108 MRPL16Q9NX20 251 aaKnown RBP7.71□□□□□ -1.18
TPM1-217ENST00000559108 TMSB15BA0A087X1C1 80 aa7.7□□□□□ -1.18
TPM1-217ENST00000559108 GRIFINA4D1Z8 144 aa7.7□□□□□ -1.18
TPM1-217ENST00000559108 C19orf71A6NCJ1 209 aa7.7□□□□□ -1.18
TPM1-217ENST00000559108 KRBOX1C9JBD0 128 aa7.7□□□□□ -1.18
TPM1-217ENST00000559108 TMEM250H0YL14 139 aa7.7□□□□□ -1.18
TPM1-217ENST00000559108 SPINK4O60575 86 aa7.7□□□□□ -1.18
TPM1-217ENST00000559108 S100A9P06702 114 aaKnown RBP7.7□□□□□ -1.18
TPM1-217ENST00000559108 DEFB130BP0DP73 79 aa7.7□□□□□ -1.18
TPM1-217ENST00000559108 DEFB130AP0DP74 79 aa7.7□□□□□ -1.18
TPM1-217ENST00000559108 TAGLN2P37802 199 aaKnown RBP7.7□□□□□ -1.18
TPM1-217ENST00000559108 DAZ2Q13117 558 aaKnown RBP7.7□□□□□ -1.18
TPM1-217ENST00000559108 OR5I1Q13606 314 aa7.7□□□□□ -1.18
TPM1-217ENST00000559108 CLLU1Q5K131 121 aa7.7□□□□□ -1.18
TPM1-217ENST00000559108 IBA57Q5T440 356 aaKnown RBP7.7□□□□□ -1.18
TPM1-217ENST00000559108 PRR27Q6MZM9 219 aa7.7□□□□□ -1.18
TPM1-217ENST00000559108 FAM159AQ6UWV7 190 aa7.7□□□□□ -1.18
TPM1-217ENST00000559108 PHLDA1Q8WV24 401 aaPredicted RBP7.7□□□□□ -1.18
TPM1-217ENST00000559108 C9orf85Q96MD7 179 aa7.7□□□□□ -1.18
TPM1-217ENST00000559108 EIF5A2Q9GZV4 153 aaKnown RBP7.7□□□□□ -1.18
TPM1-217ENST00000559108 PLECQ15149 4684 aaKnown RBP7.7□□□□□ -1.18
TPM1-217ENST00000559108 GAGE12BA1L429 117 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 LYRM9A8MSI8 78 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 FABP5P3A8MUU1 101 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 C9JCJ5 164 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 GAGE7O76087 117 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 GAGE12FP0CL80 117 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 GAGE12GP0CL81 117 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 GAGE12IP0CL82 117 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 HOXA5P20719 270 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 GNG4P50150 75 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 CEBPGP53567 150 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 FAM162BQ5T6X4 162 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 POM121L12Q8N7R1 296 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 OCC1Q8TAD7 63 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 SDF2L1Q9HCN8 221 aa7.69□□□□□ -1.18
TPM1-217ENST00000559108 TIMM8BQ9Y5J9 83 aaPredicted RBP7.69□□□□□ -1.18
TPM1-217ENST00000559108 ZNF415Q09FC8 603 aa7.68□□□□□ -1.18
TPM1-217ENST00000559108 LINC01559Q495D7 138 aa7.68□□□□□ -1.18
TPM1-217ENST00000559108 TRGV11A0A075B6L2 103 aa7.67□□□□□ -1.18
TPM1-217ENST00000559108 TRGV1A0A0A0MS02 117 aa7.67□□□□□ -1.18
TPM1-217ENST00000559108 SNURFLB1AK76 121 aa7.67□□□□□ -1.18
TPM1-217ENST00000559108 B4DEV8 164 aa7.67□□□□□ -1.18
TPM1-217ENST00000559108 NDUFS6O75380 124 aaKnown RBP7.67□□□□□ -1.18
TPM1-217ENST00000559108 ORM1P02763 201 aa7.67□□□□□ -1.18
TPM1-217ENST00000559108 GZMBP10144 247 aa7.67□□□□□ -1.18
TPM1-217ENST00000559108 MGST1P10620 155 aaKnown RBP7.67□□□□□ -1.18
TPM1-217ENST00000559108 DAD1P61803 113 aa7.67□□□□□ -1.18
TPM1-217ENST00000559108 CEMP1Q6PRD7 247 aaPredicted RBP7.67□□□□□ -1.18
TPM1-217ENST00000559108 C3orf84H3BNL1 204 aa7.66□□□□□ -1.18
TPM1-217ENST00000559108 H3BVH4 76 aa7.66□□□□□ -1.18
TPM1-217ENST00000559108 HTN3P15516 51 aa7.66□□□□□ -1.18
TPM1-217ENST00000559108 DNLZQ5SXM8 178 aa7.66□□□□□ -1.18
TPM1-217ENST00000559108 KCNS1Q96KK3 526 aa7.66□□□□□ -1.18
TPM1-217ENST00000559108 SMIM7Q9BQ49 75 aa7.66□□□□□ -1.18
TPM1-217ENST00000559108 RNASE7Q9H1E1 156 aaKnown RBP7.66□□□□□ -1.18
TPM1-217ENST00000559108 DEFB131BA0A096LNP1 70 aa7.65□□□□□ -1.18
TPM1-217ENST00000559108 TRAV10A0A0B4J240 114 aa7.65□□□□□ -1.18
TPM1-217ENST00000559108 ZNF727A8MUV8 499 aa7.65□□□□□ -1.18
TPM1-217ENST00000559108 IGHV3-53P01767 116 aa7.65□□□□□ -1.18
TPM1-217ENST00000559108 SFTA3P0C7M3 94 aa7.65□□□□□ -1.18
TPM1-217ENST00000559108 LINC01551Q86U37 167 aa7.65□□□□□ -1.18
TPM1-217ENST00000559108 NUDT10Q8NFP7 164 aa7.65□□□□□ -1.18
TPM1-217ENST00000559108 SMIM12Q96EX1 92 aa7.65□□□□□ -1.18
TPM1-217ENST00000559108 NUDT11Q96G61 164 aa7.65□□□□□ -1.18
TPM1-217ENST00000559108 JPT2Q9H910 190 aa7.65□□□□□ -1.18
TPM1-217ENST00000559108 SCRT2Q9NQ03 307 aa7.65□□□□□ -1.18
TPM1-217ENST00000559108 MUC21A0A0G2JKD1 596 aa7.64□□□□□ -1.19
TPM1-217ENST00000559108 MUC21A0A140T8X8 626 aa7.64□□□□□ -1.19
TPM1-217ENST00000559108 TEX48A0A1B0GUV7 120 aa7.64□□□□□ -1.19
TPM1-217ENST00000559108 ARMS2P0C7Q2 107 aa7.64□□□□□ -1.19
TPM1-217ENST00000559108 ADCYAP1P18509 176 aa7.64□□□□□ -1.19
TPM1-217ENST00000559108 ASIPP42127 132 aa7.64□□□□□ -1.19
TPM1-217ENST00000559108 RAB14P61106 215 aa7.64□□□□□ -1.19
TPM1-217ENST00000559108 LGALS9BQ3B8N2 356 aa7.64□□□□□ -1.19
TPM1-217ENST00000559108 RASL10AQ92737 203 aa7.64□□□□□ -1.19
TPM1-217ENST00000559108 ZNF479Q96JC4 524 aa7.64□□□□□ -1.19
TPM1-217ENST00000559108 C18orf15Q96N68 181 aa7.64□□□□□ -1.19
TPM1-217ENST00000559108 APLNQ9ULZ1 77 aa7.64□□□□□ -1.19
TPM1-217ENST00000559108 LYSTQ99698 3801 aa7.64□□□□□ -1.19
TPM1-217ENST00000559108 KMT2CQ8NEZ4 4911 aaKnown RBP7.63□□□□□ -1.19
TPM1-217ENST00000559108 ALMS1Q8TCU4 4167 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms