RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 KMT2AQ03164 3969 aa8.06□□□□□ -1.12
SNX1-204ENST00000559061 TRAV21A0A0B4J279 112 aa8.06□□□□□ -1.12
SNX1-204ENST00000559061 FBLL1A6NHQ2 334 aaKnown RBP8.06□□□□□ -1.12
SNX1-204ENST00000559061 K7EQM0 130 aa8.06□□□□□ -1.12
SNX1-204ENST00000559061 RGS13O14921 159 aa8.06□□□□□ -1.12
SNX1-204ENST00000559061 SPINK4O60575 86 aa8.06□□□□□ -1.12
SNX1-204ENST00000559061 PFN1P07737 140 aaKnown RBP8.06□□□□□ -1.12
SNX1-204ENST00000559061 MEF2BQ02080 365 aaPredicted RBP8.06□□□□□ -1.12
SNX1-204ENST00000559061 SMUG1Q53HV7 270 aa8.06□□□□□ -1.12
SNX1-204ENST00000559061 IBA57Q5T440 356 aaKnown RBP8.06□□□□□ -1.12
SNX1-204ENST00000559061 TMEM183AQ8IXX5 376 aa8.06□□□□□ -1.12
SNX1-204ENST00000559061 NAGKQ9UJ70 344 aa8.06□□□□□ -1.12
SNX1-204ENST00000559061 TIMM8BQ9Y5J9 83 aaPredicted RBP8.06□□□□□ -1.12
SNX1-204ENST00000559061 DEFB131BA0A096LNP1 70 aa8.05□□□□□ -1.12
SNX1-204ENST00000559061 TRAV10A0A0B4J240 114 aa8.05□□□□□ -1.12
SNX1-204ENST00000559061 DEFB130BP0DP73 79 aa8.05□□□□□ -1.12
SNX1-204ENST00000559061 DEFB130AP0DP74 79 aa8.05□□□□□ -1.12
SNX1-204ENST00000559061 HOXA5P20719 270 aa8.05□□□□□ -1.12
SNX1-204ENST00000559061 RPL35P42766 123 aaKnown RBP8.05□□□□□ -1.12
SNX1-204ENST00000559061 ZNF674Q2M3X9 581 aa8.05□□□□□ -1.12
SNX1-204ENST00000559061 SAPCD1Q5SSQ6 148 aa8.05□□□□□ -1.12
SNX1-204ENST00000559061 NDFIP1Q9BT67 221 aa8.05□□□□□ -1.12
SNX1-204ENST00000559061 APLNQ9ULZ1 77 aa8.05□□□□□ -1.12
SNX1-204ENST00000559061 TEX48A0A1B0GUV7 120 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 GAGE12BA1L429 117 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 RAB19A4D1S5 217 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 TEX46H3BTG2 121 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 SH2D1AO60880 128 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 GAGE7O76087 117 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 GAGE12FP0CL80 117 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 GAGE12GP0CL81 117 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 GAGE12IP0CL82 117 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 RNASE3P12724 160 aaKnown RBP8.04□□□□□ -1.12
SNX1-204ENST00000559061 DAD1P61803 113 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 BLOC1S1P78537 153 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 ZNF506Q5JVG8 444 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 C9orf85Q96MD7 179 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 MRPL16Q9NX20 251 aaKnown RBP8.04□□□□□ -1.12
SNX1-204ENST00000559061 VAX2Q9UIW0 290 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 ZFP30Q9Y2G7 519 aa8.04□□□□□ -1.12
SNX1-204ENST00000559061 IGHV4-4A0A075B6R2 117 aa8.03□□□□□ -1.12
SNX1-204ENST00000559061 LCE6AA0A183 80 aa8.03□□□□□ -1.12
SNX1-204ENST00000559061 PGPEP1LA6NFU8 196 aa8.03□□□□□ -1.12
SNX1-204ENST00000559061 UBE2G1P62253 170 aa8.03□□□□□ -1.12
SNX1-204ENST00000559061 IFITM2Q01629 132 aa8.03□□□□□ -1.12
SNX1-204ENST00000559061 CENPWQ5EE01 88 aa8.03□□□□□ -1.12
SNX1-204ENST00000559061 FAM159AQ6UWV7 190 aa8.03□□□□□ -1.12
SNX1-204ENST00000559061 POM121L12Q8N7R1 296 aa8.03□□□□□ -1.12
SNX1-204ENST00000559061 C18orf15Q96N68 181 aa8.03□□□□□ -1.12
SNX1-204ENST00000559061 TRGV1A0A0A0MS02 117 aa8.02□□□□□ -1.13
SNX1-204ENST00000559061 SNURFLB1AK76 121 aa8.02□□□□□ -1.13
SNX1-204ENST00000559061 IGLL5B9A064 214 aa8.02□□□□□ -1.13
SNX1-204ENST00000559061 KRBOX1C9JBD0 128 aa8.02□□□□□ -1.13
SNX1-204ENST00000559061 C9JQL5 133 aa8.02□□□□□ -1.13
SNX1-204ENST00000559061 HTN3P15516 51 aa8.02□□□□□ -1.13
SNX1-204ENST00000559061 ZNF415Q09FC8 603 aa8.02□□□□□ -1.13
SNX1-204ENST00000559061 TXNDC17Q9BRA2 123 aa8.02□□□□□ -1.13
SNX1-204ENST00000559061 TRGV11A0A075B6L2 103 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 RBFOX3A6NFN3 312 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 FABP5P3A8MUU1 101 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 PDE6DO43924 150 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 IFNA1P01562 189 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 RPL19P84098 196 aaKnown RBP8.01□□□□□ -1.13
SNX1-204ENST00000559061 SRSF3P84103 164 aaKnown RBP8.01□□□□□ -1.13
SNX1-204ENST00000559061 LINC01559Q495D7 138 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 TOR2AQ5JU69 321 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 FAM162BQ5T6X4 162 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 TMEM88Q6PEY1 159 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 BAGE2Q86Y30 109 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 LINC00476Q8WZB0 136 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 RASL10AQ92737 203 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 FAM210AQ96ND0 272 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 SDF2L1Q9HCN8 221 aa8.01□□□□□ -1.13
SNX1-204ENST00000559061 KLK5Q9Y337 293 aaPredicted RBP8.01□□□□□ -1.13
SNX1-204ENST00000559061 K7EN84 100 aa8□□□□□ -1.13
SNX1-204ENST00000559061 M0R036 132 aa8□□□□□ -1.13
SNX1-204ENST00000559061 S100A9P06702 114 aaKnown RBP8□□□□□ -1.13
SNX1-204ENST00000559061 LGALS9BQ3B8N2 356 aa8□□□□□ -1.13
SNX1-204ENST00000559061 DNLZQ5SXM8 178 aa8□□□□□ -1.13
SNX1-204ENST00000559061 C19orf71A6NCJ1 209 aa7.99□□□□□ -1.13
SNX1-204ENST00000559061 ATP5G1P05496 136 aa7.99□□□□□ -1.13
SNX1-204ENST00000559061 SRP19P09132 144 aaKnown RBP7.99□□□□□ -1.13
SNX1-204ENST00000559061 VSIG2Q96IQ7 327 aa7.99□□□□□ -1.13
SNX1-204ENST00000559061 KCNS1Q96KK3 526 aa7.99□□□□□ -1.13
SNX1-204ENST00000559061 PARLQ9H300 379 aa7.99□□□□□ -1.13
SNX1-204ENST00000559061 SCRT2Q9NQ03 307 aa7.99□□□□□ -1.13
SNX1-204ENST00000559061 MED9Q9NWA0 146 aa7.99□□□□□ -1.13
SNX1-204ENST00000559061 TMSB15BA0A087X1C1 80 aa7.98□□□□□ -1.13
SNX1-204ENST00000559061 GRIFINA4D1Z8 144 aa7.98□□□□□ -1.13
SNX1-204ENST00000559061 B4DEV8 164 aa7.98□□□□□ -1.13
SNX1-204ENST00000559061 F5H768 121 aa7.98□□□□□ -1.13
SNX1-204ENST00000559061 M0R2P5 195 aa7.98□□□□□ -1.13
SNX1-204ENST00000559061 IGHV3-53P01767 116 aa7.98□□□□□ -1.13
SNX1-204ENST00000559061 SFTA3P0C7M3 94 aa7.98□□□□□ -1.13
SNX1-204ENST00000559061 TAGLN2P37802 199 aaKnown RBP7.98□□□□□ -1.13
SNX1-204ENST00000559061 FHL2Q14192 279 aa7.98□□□□□ -1.13
SNX1-204ENST00000559061 ZNF479Q96JC4 524 aa7.98□□□□□ -1.13
SNX1-204ENST00000559061 SPXQ9BT56 116 aa7.98□□□□□ -1.13
SNX1-204ENST00000559061 C9JCJ5 164 aa7.97□□□□□ -1.13
SNX1-204ENST00000559061 TMEM250H0YL14 139 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms