RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ZNF727A8MUV8 499 aa15.25■□□□□ 0.03
CASC4-204ENST00000557945 ORM1P02763 201 aa15.25■□□□□ 0.03
CASC4-204ENST00000557945 TDRG1Q3Y452 100 aa15.25■□□□□ 0.03
CASC4-204ENST00000557945 GSN-AS1Q9NRJ2 163 aa15.25■□□□□ 0.03
CASC4-204ENST00000557945 TRGV11A0A075B6L2 103 aa15.24■□□□□ 0.03
CASC4-204ENST00000557945 SNURFLB1AK76 121 aa15.24■□□□□ 0.03
CASC4-204ENST00000557945 M0R036 132 aa15.24■□□□□ 0.03
CASC4-204ENST00000557945 GNRH2O43555 120 aa15.24■□□□□ 0.03
CASC4-204ENST00000557945 PLAC8L1A1L4L8 177 aa15.24■□□□□ 0.03
CASC4-204ENST00000557945 CXorf65A6NEN9 183 aa15.24■□□□□ 0.03
CASC4-204ENST00000557945 SPART-AS1P0CW21 52 aa15.24■□□□□ 0.03
CASC4-204ENST00000557945 ZNF415Q09FC8 603 aa15.24■□□□□ 0.03
CASC4-204ENST00000557945 FAM222AQ5U5X8 452 aa15.24■□□□□ 0.03
CASC4-204ENST00000557945 OCC1Q8TAD7 63 aa15.24■□□□□ 0.03
CASC4-204ENST00000557945 C11orf45Q8TAV5 145 aa15.24■□□□□ 0.03
CASC4-204ENST00000557945 BIN3Q9NQY0 253 aa15.24■□□□□ 0.03
CASC4-204ENST00000557945 TIMM8BQ9Y5J9 83 aaPredicted RBP15.24■□□□□ 0.03
CASC4-204ENST00000557945 B4DEV8 164 aa15.23■□□□□ 0.03
CASC4-204ENST00000557945 TYMSP04818 313 aa15.23■□□□□ 0.03
CASC4-204ENST00000557945 C11orf72Q8NBR9 251 aa15.23■□□□□ 0.03
CASC4-204ENST00000557945 NOP10Q9NPE3 64 aaKnown RBP15.23■□□□□ 0.03
CASC4-204ENST00000557945 MDFICQ9P1T7 246 aa15.23■□□□□ 0.03
CASC4-204ENST00000557945 CELA1Q9UNI1 258 aa15.23■□□□□ 0.03
CASC4-204ENST00000557945 TMSB15BA0A087X1C1 80 aa15.22■□□□□ 0.03
CASC4-204ENST00000557945 IGKV3D-20A0A0C4DH25 116 aa15.22■□□□□ 0.03
CASC4-204ENST00000557945 OR5I1Q13606 314 aa15.22■□□□□ 0.03
CASC4-204ENST00000557945 FAM74A3Q4VXF1 159 aa15.22■□□□□ 0.03
CASC4-204ENST00000557945 SOHLH1Q5JUK2 328 aa15.22■□□□□ 0.03
CASC4-204ENST00000557945 IBA57Q5T440 356 aaKnown RBP15.22■□□□□ 0.03
CASC4-204ENST00000557945 DAZAP1Q96EP5 407 aaKnown RBP15.22■□□□□ 0.03
CASC4-204ENST00000557945 WWC2-AS2Q96NR7 200 aa15.22■□□□□ 0.03
CASC4-204ENST00000557945 DKK2Q9UBU2 259 aa15.22■□□□□ 0.03
CASC4-204ENST00000557945 COMMD7Q86VX2 200 aa15.21■□□□□ 0.02
CASC4-204ENST00000557945 IL17DQ8TAD2 202 aa15.21■□□□□ 0.02
CASC4-204ENST00000557945 IGHV3-16A0A0C4DH30 117 aa15.2■□□□□ 0.02
CASC4-204ENST00000557945 TEX48A0A1B0GUV7 120 aa15.2■□□□□ 0.02
CASC4-204ENST00000557945 LYRM9A8MSI8 78 aa15.2■□□□□ 0.02
CASC4-204ENST00000557945 KRBOX1C9JBD0 128 aa15.2■□□□□ 0.02
CASC4-204ENST00000557945 K7EN84 100 aa15.2■□□□□ 0.02
CASC4-204ENST00000557945 TCL1AP56279 114 aa15.2■□□□□ 0.02
CASC4-204ENST00000557945 NANOS2P60321 138 aaKnown RBP15.2■□□□□ 0.02
CASC4-204ENST00000557945 LINC01559Q495D7 138 aa15.2■□□□□ 0.02
CASC4-204ENST00000557945 TMEM241Q24JQ0 296 aa15.19■□□□□ 0.02
CASC4-204ENST00000557945 LY96Q9Y6Y9 160 aa15.19■□□□□ 0.02
CASC4-204ENST00000557945 GRIFINA4D1Z8 144 aa15.18■□□□□ 0.02
CASC4-204ENST00000557945 SFTA3P0C7M3 94 aa15.18■□□□□ 0.02
CASC4-204ENST00000557945 DEFB130BP0DP73 79 aa15.18■□□□□ 0.02
CASC4-204ENST00000557945 DEFB130AP0DP74 79 aa15.18■□□□□ 0.02
CASC4-204ENST00000557945 S100A4P26447 101 aaKnown RBP15.18■□□□□ 0.02
CASC4-204ENST00000557945 ASIPP42127 132 aa15.18■□□□□ 0.02
CASC4-204ENST00000557945 RPL19P84098 196 aaKnown RBP15.18■□□□□ 0.02
CASC4-204ENST00000557945 DAZ2Q13117 558 aaKnown RBP15.18■□□□□ 0.02
CASC4-204ENST00000557945 LINC00862A6NCI5 91 aa15.17■□□□□ 0.02
CASC4-204ENST00000557945 P01737 135 aa15.17■□□□□ 0.02
CASC4-204ENST00000557945 DAD1P61803 113 aa15.17■□□□□ 0.02
CASC4-204ENST00000557945 UQCC3Q6UW78 93 aa15.17■□□□□ 0.02
CASC4-204ENST00000557945 LINC01551Q86U37 167 aa15.17■□□□□ 0.02
CASC4-204ENST00000557945 NAT8Q9UHE5 227 aa15.17■□□□□ 0.02
CASC4-204ENST00000557945 TRGV1A0A0A0MS02 117 aa15.16■□□□□ 0.02
CASC4-204ENST00000557945 C19orf71A6NCJ1 209 aa15.16■□□□□ 0.02
CASC4-204ENST00000557945 C12orf74Q32Q52 190 aa15.16■□□□□ 0.02
CASC4-204ENST00000557945 SPXQ9BT56 116 aa15.16■□□□□ 0.02
CASC4-204ENST00000557945 RNASE7Q9H1E1 156 aaKnown RBP15.16■□□□□ 0.02
CASC4-204ENST00000557945 Q6ZTI0 123 aa15.15■□□□□ 0.02
CASC4-204ENST00000557945 NUDT10Q8NFP7 164 aa15.15■□□□□ 0.02
CASC4-204ENST00000557945 OR2D3Q8NGH3 330 aa15.15■□□□□ 0.02
CASC4-204ENST00000557945 NUDT11Q96G61 164 aa15.15■□□□□ 0.02
CASC4-204ENST00000557945 MRPL16Q9NX20 251 aaKnown RBP15.15■□□□□ 0.02
CASC4-204ENST00000557945 GAGE12BA1L429 117 aa15.14■□□□□ 0.01
CASC4-204ENST00000557945 GAGE7O76087 117 aa15.14■□□□□ 0.01
CASC4-204ENST00000557945 GAGE12FP0CL80 117 aa15.14■□□□□ 0.01
CASC4-204ENST00000557945 GAGE12GP0CL81 117 aa15.14■□□□□ 0.01
CASC4-204ENST00000557945 GAGE12IP0CL82 117 aa15.14■□□□□ 0.01
CASC4-204ENST00000557945 H3BVH4 76 aa15.13■□□□□ 0.01
CASC4-204ENST00000557945 SPINK4O60575 86 aa15.13■□□□□ 0.01
CASC4-204ENST00000557945 RPL23P62829 140 aaKnown RBP15.13■□□□□ 0.01
CASC4-204ENST00000557945 ADIRFQ15847 76 aa15.13■□□□□ 0.01
CASC4-204ENST00000557945 Q6ZTC4 211 aa15.13■□□□□ 0.01
CASC4-204ENST00000557945 M0R2P5 195 aa15.12■□□□□ 0.01
CASC4-204ENST00000557945 RNASE3P12724 160 aaKnown RBP15.12■□□□□ 0.01
CASC4-204ENST00000557945 ERVFC1-1P60608 527 aa15.12■□□□□ 0.01
CASC4-204ENST00000557945 MUC7Q8TAX7 377 aa15.12■□□□□ 0.01
CASC4-204ENST00000557945 C9orf85Q96MD7 179 aa15.12■□□□□ 0.01
CASC4-204ENST00000557945 ARMS2P0C7Q2 107 aa15.11■□□□□ 0.01
CASC4-204ENST00000557945 RPS20P60866 119 aaKnown RBP15.11■□□□□ 0.01
CASC4-204ENST00000557945 LGALS9BQ3B8N2 356 aa15.11■□□□□ 0.01
CASC4-204ENST00000557945 ZNF575Q86XF7 245 aa15.11■□□□□ 0.01
CASC4-204ENST00000557945 RPP21Q9H633 154 aaKnown RBP15.11■□□□□ 0.01
CASC4-204ENST00000557945 IL36BQ9NZH7 164 aa15.11■□□□□ 0.01
CASC4-204ENST00000557945 TRGV2A0A075B6R0 118 aa15.11■□□□□ 0.01
CASC4-204ENST00000557945 XKRY2A2RUG3 117 aa15.11■□□□□ 0.01
CASC4-204ENST00000557945 GATCO43716 136 aaKnown RBP15.11■□□□□ 0.01
CASC4-204ENST00000557945 CXCL1P09341 107 aa15.11■□□□□ 0.01
CASC4-204ENST00000557945 GZMBP10144 247 aa15.11■□□□□ 0.01
CASC4-204ENST00000557945 DNLZQ5SXM8 178 aa15.11■□□□□ 0.01
CASC4-204ENST00000557945 LINC00612Q8N6U2 182 aa15.11■□□□□ 0.01
CASC4-204ENST00000557945 TMEM218A2RU14 115 aa15.1■□□□□ 0.01
CASC4-204ENST00000557945 HTN3P15516 51 aa15.1■□□□□ 0.01
CASC4-204ENST00000557945 ZFAND6Q6FIF0 208 aa15.1■□□□□ 0.01
CASC4-204ENST00000557945 FAM231DQ6ZW35 169 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms