RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 EWSR1Q01844 656 aaKnown RBP eCLIP3.68□□□□□ -1.82
ATXN3-247ENST00000557311 ZNF85Q03923 595 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 Q0VG73 95 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 ZNF816Q0VGE8 651 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-247ENST00000557311 FAM53AQ6NSI3 398 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-247ENST00000557311 GOLT1AQ6ZVE7 132 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 Q8N976 141 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 OR10J6PQ8NGY7 276 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 FAM213BQ8TBF2 198 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 C18orf32Q8TCD1 76 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 ARPC1AQ92747 370 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 PELI1Q96FA3 418 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 BORCS8Q96FH0 119 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 KCNS1Q96KK3 526 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 FAM103A1Q9BTL3 118 aaKnown RBP3.68□□□□□ -1.82
ATXN3-247ENST00000557311 COMMD5Q9GZQ3 224 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 SH3BGRL3Q9H299 93 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 LINC00574Q9H8X3 128 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 NRN1Q9NPD7 142 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 MDFICQ9P1T7 246 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 RABAC1Q9UI14 185 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 TP53TG1Q9Y2A0 90 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 TMEM14AQ9Y6G1 99 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 PXMP4Q9Y6I8 212 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 CSMD3Q7Z407 3707 aa3.68□□□□□ -1.82
ATXN3-247ENST00000557311 KIAA2026Q5HYC2 2103 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 TRAV9-1A0A075B6T8 112 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 IGHV3-72A0A0B4J1Y9 119 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 TRAV5A0A0B4J249 113 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 LOC107984640A0A0U1RRK4 108 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 NPIPB11E5RHQ5 1161 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 M0R129 80 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 MPDU1O75352 247 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 SERF1AO75920 110 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 IGHV3-7P01780 117 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 SCTP09683 121 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 OR9G9P0C7N8 305 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 BCL3P20749 454 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 TMEM50BP56557 158 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 PIK3CD-AS1Q5SR53 167 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 LYRM7Q5U5X0 104 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 HRCT1Q6UXD1 115 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 LINC00322Q6ZN03 302 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-247ENST00000557311 GTSCR1Q86UQ5 136 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 BPIFA4PQ86YQ2 179 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 C10orf126Q8N4M7 172 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 RPP25LQ8N5L8 163 aaKnown RBP3.67□□□□□ -1.82
ATXN3-247ENST00000557311 LEAP2Q969E1 77 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 ATP5SQ99766 215 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 RARRES2Q99969 163 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 VGLL1Q99990 258 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 NABP2Q9BQ15 211 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 TMEM70Q9BUB7 260 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 CALYQ9NYX4 217 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 IL36RNQ9UBH0 155 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 GNG12Q9UBI6 72 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 PEMTQ9UBM1 199 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 R4GMQ9 66 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 SORL1Q92673 2214 aa3.67□□□□□ -1.82
ATXN3-247ENST00000557311 IGHV4OR15-8A0A075B7B6 117 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 A0A087WW49 117 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 A0A087X0K7 114 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 TRAV41A0A0B4J266 112 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 NUPR2A6NF83 97 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 GGTLC3B5MD39 225 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 G3V318 75 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 SRSF10O75494 262 aaKnown RBP3.66□□□□□ -1.82
ATXN3-247ENST00000557311 NDUFC2O95298 119 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 LGALS1P09382 135 aaKnown RBP3.66□□□□□ -1.82
ATXN3-247ENST00000557311 C3orf79P0CE67 100 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 IGLC6P0CF74 106 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 SMIM13P0DJ93 91 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 CCL1P22362 96 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 IL3RAP26951 378 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 FCGR2CP31995 323 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 PPP1CCP36873 323 aaKnown RBP3.66□□□□□ -1.82
ATXN3-247ENST00000557311 PSMB3P49720 205 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 MTCP1P56278 107 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 C9orf153Q5TBE3 101 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 Q6P435 159 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 CEMP1Q6PRD7 247 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-247ENST00000557311 ZNF322Q6U7Q0 402 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-247ENST00000557311 TMEM136Q6ZRR5 245 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 SLC25A42Q86VD7 318 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 LINC00311Q8N616 119 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 GATD1Q8NB37 220 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 RFESDQ8TAC1 157 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 RAB37Q96AX2 223 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 SLC25A38Q96DW6 304 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 C2orf50Q96LR7 162 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 LINC01587Q99440 93 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 AGMATQ9BSE5 352 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 RNF126Q9BV68 326 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 TMEM191AQ9H0A3 160 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 PARP12Q9H0J9 701 aaKnown RBP3.66□□□□□ -1.82
ATXN3-247ENST00000557311 RNASE7Q9H1E1 156 aaKnown RBP3.66□□□□□ -1.82
ATXN3-247ENST00000557311 NAA60Q9H7X0 242 aa3.66□□□□□ -1.82
ATXN3-247ENST00000557311 KLK5Q9Y337 293 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-247ENST00000557311 KIAA1109Q2LD37 5005 aa3.65□□□□□ -1.82
ATXN3-247ENST00000557311 TRBV20-1A0A075B6N2 111 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 1045.9 ms