RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 MT-ND6P03923 174 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 LGALS1P09382 135 aaKnown RBP1.57□□□□□ -2.16
FCF1-208ENST00000556814 SCTP09683 121 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 FABP2P12104 132 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 HLA-DMBP28068 263 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 ASIPP42127 132 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 ATP5G3P48201 142 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 YPEL3P61236 119 aaPredicted RBP1.57□□□□□ -2.16
FCF1-208ENST00000556814 BTG2P78543 158 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 PSG9Q00887 426 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 MSMO1Q15800 293 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 KRTAP13-4Q3LI77 160 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 PCOTHQ58A44 107 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 BVES-AS1Q5T3Y7 98 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 AADACL3Q5VUY0 350 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 TEX36Q5VZQ5 186 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 UNQ5815/PRO19632Q6UWF5 114 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 LYZL1Q6UWQ5 148 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 C1orf158Q8N1D5 194 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 ZNF676Q8N7Q3 588 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 TMEM229BQ8NBD8 167 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 VSTM2AQ8TAG5 236 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 STAG3L4Q8TBR4 150 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 BORCS7Q96B45 105 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 SDF2Q99470 211 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 MRPL32Q9BYC8 188 aaKnown RBP1.57□□□□□ -2.16
FCF1-208ENST00000556814 SMIM3Q9BZL3 60 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 ENY2Q9NPA8 101 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 MED31Q9Y3C7 131 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 CICQ96RK0 1608 aaPredicted RBP1.57□□□□□ -2.16
FCF1-208ENST00000556814 MYH10P35580 1976 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 TOPAZ1Q8N9V7 1692 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 FN1P02751 2386 aaKnown RBP1.57□□□□□ -2.16
FCF1-208ENST00000556814 COL4A2P08572 1712 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 RGPD1P0DJD0 1748 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 COL5A3P25940 1745 aaPredicted RBP1.57□□□□□ -2.16
FCF1-208ENST00000556814 RICTORQ6R327 1708 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 XRN1Q8IZH2 1706 aaKnown RBP1.57□□□□□ -2.16
FCF1-208ENST00000556814 TECPR2O15040 1411 aa1.57□□□□□ -2.16
FCF1-208ENST00000556814 GBF1Q92538 1859 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 MYH3P11055 1940 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 PAPPAQ13219 1627 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 NHSL1Q5SYE7 1610 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 RREB1Q92766 1687 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 TRAV7A0A075B6U4 112 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 ZNF736B4DX44 427 aaPredicted RBP1.56□□□□□ -2.16
FCF1-208ENST00000556814 NCR2O95944 276 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 PRH1P02810 166 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 GPX1P07203 203 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 SPINK8P0C7L1 97 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 IFITM1P13164 125 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 SRIP30626 198 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 S100A3P33764 101 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 G6PCP35575 357 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 EMP1P54849 157 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 TMEM258P61165 79 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 HSPE1P61604 102 aaKnown RBP1.56□□□□□ -2.16
FCF1-208ENST00000556814 SLC38A11Q08AI6 406 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 MPV17LQ2QL34 196 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 TDRG1Q3Y452 100 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 LYRM7Q5U5X0 104 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 GLIPR1L1Q6UWM5 242 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 CYP2G1PQ6ZSU1 146 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 OR2T10Q8NGZ9 312 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 OR10AG1Q8NH19 301 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 MRPL30Q8TCC3 161 aaKnown RBP1.56□□□□□ -2.16
FCF1-208ENST00000556814 DCANP1Q8TF63 244 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 RAB37Q96AX2 223 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 C2orf50Q96LR7 162 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 MCEEQ96PE7 176 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 OR4C12Q96R67 309 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 COMMD5Q9GZQ3 224 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 SH3BGRL3Q9H299 93 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 NPVFQ9HCQ7 196 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 XAGE1AQ9HD64 81 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 TVP23BQ9NYZ1 205 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 SPCS1Q9Y6A9 102 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 TIAM2Q8IVF5 1701 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 FMN2Q9NZ56 1722 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 MALRD1Q5VYJ5 2156 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 RGPD8O14715 1765 aaPredicted RBP1.56□□□□□ -2.16
FCF1-208ENST00000556814 STRCQ7RTU9 1775 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 RGPD5Q99666 1765 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 KIF13BQ9NQT8 1826 aa1.56□□□□□ -2.16
FCF1-208ENST00000556814 NUMA1Q14980 2115 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 PLCH1Q4KWH8 1693 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 LMO7Q8WWI1 1683 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 DDX60Q8IY21 1712 aaKnown RBP1.55□□□□□ -2.16
FCF1-208ENST00000556814 LAMB1P07942 1786 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 ANKRD36CQ5JPF3 1778 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 KIF1BO60333 1816 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 TRAV5A0A0B4J249 113 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 IGHV1-18A0A0C4DH31 117 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 A0A1W2PPM0 123 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 OR2T8A6NH00 312 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 C9JAW5 83 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 H3BMG7 143 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 H7C2G1 150 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 PITX3O75364 302 aa1.55□□□□□ -2.16
FCF1-208ENST00000556814 OR2H2O95918 312 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms