RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 ZNF138P52744 262 aa4.55□□□□□ -1.68
TMEM260-212ENST00000556810 HILS1P60008 231 aa4.55□□□□□ -1.68
TMEM260-212ENST00000556810 RAB4BP61018 213 aa4.55□□□□□ -1.68
TMEM260-212ENST00000556810 HIST1H1AQ02539 215 aaPredicted RBP4.55□□□□□ -1.68
TMEM260-212ENST00000556810 ACTL10Q5JWF8 245 aa4.55□□□□□ -1.68
TMEM260-212ENST00000556810 TCF24Q7RTU0 167 aa4.55□□□□□ -1.68
TMEM260-212ENST00000556810 OR2D3Q8NGH3 330 aa4.55□□□□□ -1.68
TMEM260-212ENST00000556810 TSSC4Q9Y5U2 329 aaPredicted RBP4.55□□□□□ -1.68
TMEM260-212ENST00000556810 MEGF8Q7Z7M0 2845 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 A0A1B0GUT8 65 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 HIGD1CA8MV81 97 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 SNURFLB1AK76 121 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 M0R3E3 92 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 ZNF207O43670 478 aaKnown RBP4.54□□□□□ -1.68
TMEM260-212ENST00000556810 TCF21O43680 179 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 DUSP14O95147 198 aaKnown RBP4.54□□□□□ -1.68
TMEM260-212ENST00000556810 NDUFA7O95182 113 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 IGLV2-11P01706 119 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 NDUFA6P56556 154 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 SNRPEP62304 92 aaKnown RBP4.54□□□□□ -1.68
TMEM260-212ENST00000556810 HBBP68871 147 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 FABP9Q0Z7S8 132 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 EBLN2Q6P2I7 272 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 Q6ZSV7 163 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 SMIM15Q7Z3B0 74 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 ZFP82Q8N141 532 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 NHLRC2Q8NBF2 726 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 ZNF738Q8NE65 137 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 OR11H1Q8NG94 326 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 TM2D2Q9BX73 214 aa4.54□□□□□ -1.68
TMEM260-212ENST00000556810 PKD1L1Q8TDX9 2849 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 TGP01266 2768 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 IGHV3OR16-8A0A075B7F1 116 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 TRAV8-1A0A0A6YYK1 113 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 TRAV25A0A0B4J276 109 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 TRAV21A0A0B4J279 112 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 IGHV3-66A0A0C4DH42 116 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 USP17L23D6RBM5 183 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 HIST1H2BKO60814 126 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 TRBV12-3P01733 135 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 APCSP02743 223 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 APOHP02749 345 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-212ENST00000556810 HIST1H2BJP06899 126 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 CRISP2P16562 243 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 CBLN1P23435 193 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 HIST1H2BOP23527 126 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 TSPOP30536 169 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 HOXD3P31249 432 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-212ENST00000556810 HIST1H2BBP33778 126 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 HIST1H2BDP58876 126 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 HIST1H2BCP62807 126 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 KLF5Q13887 457 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-212ENST00000556810 HIST2H2BEQ16778 126 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 OR10J3Q5JRS4 329 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-212ENST00000556810 UNQ9165/PRO28630Q6UXU0 137 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 IL17RELQ6ZVW7 336 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 KLHL30-AS1Q8NEE0 82 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 NUP35Q8NFH5 326 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 OR1N2Q8NGR9 330 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 HIST1H2BHQ93079 126 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 TMEM18Q96B42 140 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 SGK494Q96LW2 274 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 HIST1H2BNQ99877 126 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 HIST1H2BMQ99879 126 aa4.53□□□□□ -1.68
TMEM260-212ENST00000556810 IGHV4OR15-8A0A075B7B6 117 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 IGHV3OR16-13A0A075B7E8 117 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 A0A087WW49 117 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 IGKV2-40A0A087WW87 121 aaPredicted RBP4.52□□□□□ -1.69
TMEM260-212ENST00000556810 IGHV3-49A0A0A0MS15 119 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 IGHV3-74A0A0B4J1X5 117 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 C2orf70A6NJV1 201 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 IGKV2D-40P01614 121 aaPredicted RBP4.52□□□□□ -1.69
TMEM260-212ENST00000556810 ORM1P02763 201 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 RAB4AP20338 218 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 LEPP41159 167 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 AKR1D1P51857 326 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 SYNJ2BPP57105 145 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 TCTEX1D4Q5JR98 221 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 COA6Q5JTJ3 125 aaKnown RBP4.52□□□□□ -1.69
TMEM260-212ENST00000556810 OR9G4Q8NGQ1 327 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 DYNLRB2Q8TF09 96 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 ZC2HC1AQ96GY0 325 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 KCNS1Q96KK3 526 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 DUX5Q96PT3 197 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 ODF3Q96PU9 254 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 VGLL1Q99990 258 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 SIGLEC8Q9NYZ4 499 aa4.52□□□□□ -1.69
TMEM260-212ENST00000556810 IGKV2D-30A0A075B6S6 120 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 TRAV8-2A0A0B4J237 113 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 TMEM213A2RRL7 107 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 OR4C46A6NHA9 309 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 ZNF705FA8MVS1 300 aaPredicted RBP4.51□□□□□ -1.69
TMEM260-212ENST00000556810 SH2D1AO60880 128 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 GPX1P07203 203 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 TCL1AP56279 114 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 CACNG7P62955 275 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 Q0VG73 95 aa4.51□□□□□ -1.69
TMEM260-212ENST00000556810 MRPL54Q6P161 138 aaKnown RBP4.51□□□□□ -1.69
TMEM260-212ENST00000556810 TMEM136Q6ZRR5 245 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms