RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TRGV2A0A075B6R0 118 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 UBE2L5PA0A1B0GUS4 154 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 ZFP92A6NM28 416 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 CEBPZOSA8MTT3 80 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 SNURFLB1AK76 121 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 RS1O15537 224 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 CRYGDP07320 174 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 HIST1H1AQ02539 215 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-236ENST00000556220 MIC13Q5XKP0 118 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 Q6ZTI0 123 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 SCXQ7RTU7 201 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 RNF182Q8N6D2 247 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 NRACQ8N912 160 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 ZNF738Q8NE65 137 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 OR8A1Q8NGG7 326 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 C20orf144Q9BQM9 153 aa4.53□□□□□ -1.68
ATXN3-236ENST00000556220 TRAV5A0A0B4J249 113 aa4.52□□□□□ -1.69
ATXN3-236ENST00000556220 KRTAP10-7P60409 375 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-236ENST00000556220 MRPL23Q16540 153 aaKnown RBP4.52□□□□□ -1.69
ATXN3-236ENST00000556220 PSG3Q16557 428 aa4.52□□□□□ -1.69
ATXN3-236ENST00000556220 C10orf25Q5T742 122 aa4.52□□□□□ -1.69
ATXN3-236ENST00000556220 NEGR1Q7Z3B1 354 aa4.52□□□□□ -1.69
ATXN3-236ENST00000556220 WFDC10BQ8IUB3 73 aa4.52□□□□□ -1.69
ATXN3-236ENST00000556220 OR1B1Q8NGR6 318 aa4.52□□□□□ -1.69
ATXN3-236ENST00000556220 RNASE11Q8TAA1 199 aaKnown RBP4.52□□□□□ -1.69
ATXN3-236ENST00000556220 FAM167A-AS1Q96KT0 104 aa4.52□□□□□ -1.69
ATXN3-236ENST00000556220 CHAC1Q9BUX1 264 aa4.52□□□□□ -1.69
ATXN3-236ENST00000556220 TMEM147Q9BVK8 224 aa4.52□□□□□ -1.69
ATXN3-236ENST00000556220 NPCDR1Q9BY65 106 aa4.52□□□□□ -1.69
ATXN3-236ENST00000556220 PARD6GQ9BYG4 376 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-236ENST00000556220 SLC25A22Q9H936 323 aa4.52□□□□□ -1.69
ATXN3-236ENST00000556220 KANTRA0A1W2PQU2 76 aa4.51□□□□□ -1.69
ATXN3-236ENST00000556220 HMGB3O15347 200 aaKnown RBP4.51□□□□□ -1.69
ATXN3-236ENST00000556220 FABP1P07148 127 aa4.51□□□□□ -1.69
ATXN3-236ENST00000556220 SEC11BP0C7V7 166 aa4.51□□□□□ -1.69
ATXN3-236ENST00000556220 PRB4P10163 310 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-236ENST00000556220 GPX4P36969 197 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-236ENST00000556220 BAXQ07812 192 aa4.51□□□□□ -1.69
ATXN3-236ENST00000556220 SLAQ13239 276 aa4.51□□□□□ -1.69
ATXN3-236ENST00000556220 ATRAIDQ6UW56 229 aa4.51□□□□□ -1.69
ATXN3-236ENST00000556220 THAP8Q8NA92 274 aa4.51□□□□□ -1.69
ATXN3-236ENST00000556220 INO80EQ8NBZ0 244 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-236ENST00000556220 TMEM37Q8WXS4 190 aa4.51□□□□□ -1.69
ATXN3-236ENST00000556220 GPR82Q96P67 336 aa4.51□□□□□ -1.69
ATXN3-236ENST00000556220 PRO0255Q9UI72 69 aa4.51□□□□□ -1.69
ATXN3-236ENST00000556220 STRAPQ9Y3F4 350 aaKnown RBP4.51□□□□□ -1.69
ATXN3-236ENST00000556220 IGKV2D-30A0A075B6S6 120 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 TRGV1A0A0A0MS02 117 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 AGPAT2O15120 278 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 MRPS12O15235 138 aaKnown RBP4.5□□□□□ -1.69
ATXN3-236ENST00000556220 IGLV2-8P01709 118 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 TPT1P13693 172 aaKnown RBP4.5□□□□□ -1.69
ATXN3-236ENST00000556220 FGF7P21781 194 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 HNRNPA3P51991 378 aaKnown RBP4.5□□□□□ -1.69
ATXN3-236ENST00000556220 CRYBA4P53673 196 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 TIRAPP58753 221 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 SUMO2P61956 95 aaKnown RBP4.5□□□□□ -1.69
ATXN3-236ENST00000556220 AKR1C1Q04828 323 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 ACOT6Q3I5F7 207 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-236ENST00000556220 GFI1BQ5VTD9 330 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 Q6ZRG5 221 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 OR2G3Q8NGZ4 309 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 CIRBP-AS1Q8TBR5 109 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 PHYHIPLQ96FC7 376 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 TRGV9Q99603 122 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 MED9Q9NWA0 146 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 PAIP2BQ9ULR5 123 aaKnown RBP4.5□□□□□ -1.69
ATXN3-236ENST00000556220 HHLA3Q9XRX5 114 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 FUT9Q9Y231 359 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 LPAP08519 4548 aa4.5□□□□□ -1.69
ATXN3-236ENST00000556220 A0A1B0GV50 99 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 IBA57-AS1B1ANH7 110 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 TAAR5O14804 337 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 SPINK4O60575 86 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 MED6O75586 246 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 GAS8-AS1O95177 125 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 PET100P0DJ07 73 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 S100A7P31151 101 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 FGF8P55075 233 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-236ENST00000556220 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-236ENST00000556220 ZNF415Q09FC8 603 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 WFDC2Q14508 124 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 TDRG1Q3Y452 100 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 MIR17HGQ75NE6 70 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 COMMD7Q86VX2 200 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 MBD3L1Q8WWY6 194 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 SLC35E1Q96K37 410 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 PYGO2Q9BRQ0 406 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 PSMG3Q9BT73 122 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-236ENST00000556220 SLC25A31Q9H0C2 315 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 DNAJC4Q9NNZ3 241 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 GSN-AS1Q9NRJ2 163 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 UQCC1Q9NVA1 299 aa4.49□□□□□ -1.69
ATXN3-236ENST00000556220 IGHV3-38A0A0C4DH36 116 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 FNDC10F2Z333 226 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 K7EQD1 137 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 SCO1O75880 301 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 IGHV3-53P01767 116 aa4.48□□□□□ -1.69
ATXN3-236ENST00000556220 SNRPCP09234 159 aaKnown RBP4.48□□□□□ -1.69
ATXN3-236ENST00000556220 ORM2P19652 201 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms