RNA–Protein interactions for RNA: ENST00000556184.5

SRSF5-212, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 2,443 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-212ENST00000556184 NDUFA3O95167 84 aa8.17□□□□□ -1.1
SRSF5-212ENST00000556184 C19orf54Q5BKX5 351 aa8.17□□□□□ -1.1
SRSF5-212ENST00000556184 RALYQ9UKM9 306 aaKnown RBP8.17□□□□□ -1.1
SRSF5-212ENST00000556184 CENPVL3A0A0U1RRI6 287 aa8.16□□□□□ -1.1
SRSF5-212ENST00000556184 LGALS1P09382 135 aaKnown RBP8.16□□□□□ -1.1
SRSF5-212ENST00000556184 Q5PR19 223 aa8.16□□□□□ -1.1
SRSF5-212ENST00000556184 NEXN-AS1Q8NBZ9 246 aa8.16□□□□□ -1.1
SRSF5-212ENST00000556184 CCL17Q92583 94 aa8.16□□□□□ -1.1
SRSF5-212ENST00000556184 TOMM6Q96B49 74 aa8.16□□□□□ -1.1
SRSF5-212ENST00000556184 SMAD5-AS1Q9Y6J3 95 aa8.16□□□□□ -1.1
SRSF5-212ENST00000556184 CACNA1AO00555 2505 aa8.16□□□□□ -1.1
SRSF5-212ENST00000556184 SLC50A1Q9BRV3 221 aa8.15□□□□□ -1.1
SRSF5-212ENST00000556184 HIF1ANQ9NWT6 349 aa8.15□□□□□ -1.1
SRSF5-212ENST00000556184 ATMQ13315 3056 aa8.15□□□□□ -1.1
SRSF5-212ENST00000556184 MAP1BP46821 2468 aaKnown RBP8.15□□□□□ -1.1
SRSF5-212ENST00000556184 SVILO95425 2214 aa8.15□□□□□ -1.1
SRSF5-212ENST00000556184 LINC01549A6NIU2 74 aa8.15□□□□□ -1.1
SRSF5-212ENST00000556184 GATA1P15976 413 aaPredicted RBP8.15□□□□□ -1.1
SRSF5-212ENST00000556184 DEFB109BQ30KR1 87 aa8.15□□□□□ -1.1
SRSF5-212ENST00000556184 HEATR1Q9H583 2144 aaKnown RBP8.15□□□□□ -1.11
SRSF5-212ENST00000556184 IGKV3D-20A0A0C4DH25 116 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 NBR2O15453 112 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 MT-ATP8P03928 68 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 XGP55808 180 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 FAM27E3Q08E93 113 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 TMEM78Q5T7P6 136 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 Q8TAT8 98 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 MRPL53Q96EL3 112 aaKnown RBP8.14□□□□□ -1.11
SRSF5-212ENST00000556184 SPANXA1Q9NS26 97 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 C21orf62Q9NYP8 219 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 RAXQ9Y2V3 346 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 CD7P09564 240 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 COX6B1P14854 86 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 SMIM2Q9BVW6 85 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 ACACBO00763 2458 aa8.14□□□□□ -1.11
SRSF5-212ENST00000556184 IGHV7-4-1A0A0J9YVY3 117 aa8.13□□□□□ -1.11
SRSF5-212ENST00000556184 ERCC8Q13216 396 aa8.13□□□□□ -1.11
SRSF5-212ENST00000556184 CARD19Q96LW7 228 aa8.13□□□□□ -1.11
SRSF5-212ENST00000556184 LINC01600Q96MT4 127 aa8.13□□□□□ -1.11
SRSF5-212ENST00000556184 ZNF688P0C7X2 276 aa8.13□□□□□ -1.11
SRSF5-212ENST00000556184 GAGE5Q13069 117 aa8.13□□□□□ -1.11
SRSF5-212ENST00000556184 GAGE6Q13070 117 aa8.13□□□□□ -1.11
SRSF5-212ENST00000556184 KLK9Q2XQG4 91 aa8.13□□□□□ -1.11
SRSF5-212ENST00000556184 PAPPA-AS1Q5QFB9 102 aa8.13□□□□□ -1.11
SRSF5-212ENST00000556184 DYNAPQ8N1N2 210 aa8.13□□□□□ -1.11
SRSF5-212ENST00000556184 RNASE6Q93091 150 aaKnown RBP8.13□□□□□ -1.11
SRSF5-212ENST00000556184 SCGB3A1Q96QR1 104 aa8.13□□□□□ -1.11
SRSF5-212ENST00000556184 KLK9Q9UKQ9 250 aa8.13□□□□□ -1.11
SRSF5-212ENST00000556184 SRD5A1P18405 259 aa8.12□□□□□ -1.11
SRSF5-212ENST00000556184 ASIPP42127 132 aa8.12□□□□□ -1.11
SRSF5-212ENST00000556184 IGFL3Q6UXB1 125 aa8.12□□□□□ -1.11
SRSF5-212ENST00000556184 RP1L1Q8IWN7 2480 aaPredicted RBP8.12□□□□□ -1.11
SRSF5-212ENST00000556184 APC2O95996 2303 aa8.12□□□□□ -1.11
SRSF5-212ENST00000556184 A8MWV9 139 aa8.12□□□□□ -1.11
SRSF5-212ENST00000556184 CTSGP08311 255 aa8.12□□□□□ -1.11
SRSF5-212ENST00000556184 PSMB2P49721 201 aa8.12□□□□□ -1.11
SRSF5-212ENST00000556184 PRADC1Q9BSG0 188 aa8.12□□□□□ -1.11
SRSF5-212ENST00000556184 PPP1R17O96001 155 aa8.11□□□□□ -1.11
SRSF5-212ENST00000556184 TRGV3P03979 118 aa8.11□□□□□ -1.11
SRSF5-212ENST00000556184 ZFAND6Q6FIF0 208 aa8.11□□□□□ -1.11
SRSF5-212ENST00000556184 NDUFA11Q86Y39 141 aa8.11□□□□□ -1.11
SRSF5-212ENST00000556184 ANKRD11Q6UB99 2663 aaPredicted RBP8.11□□□□□ -1.11
SRSF5-212ENST00000556184 EPG5Q9HCE0 2579 aa8.11□□□□□ -1.11
SRSF5-212ENST00000556184 M0R381 172 aa8.11□□□□□ -1.11
SRSF5-212ENST00000556184 TIMM23O14925 209 aa8.11□□□□□ -1.11
SRSF5-212ENST00000556184 PPIFP30405 207 aaKnown RBP8.11□□□□□ -1.11
SRSF5-212ENST00000556184 EFNA4P52798 201 aa8.11□□□□□ -1.11
SRSF5-212ENST00000556184 RNF183Q96D59 192 aa8.11□□□□□ -1.11
SRSF5-212ENST00000556184 CITED1Q99966 193 aa8.11□□□□□ -1.11
SRSF5-212ENST00000556184 LENEPQ9Y5L5 61 aa8.11□□□□□ -1.11
SRSF5-212ENST00000556184 ZNF815PA8K554 130 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 SUMO2P61956 95 aaKnown RBP8.1□□□□□ -1.11
SRSF5-212ENST00000556184 SRSF9Q13242 221 aaKnown RBP eCLIP8.1□□□□□ -1.112e-10■■□□□ 14.4
SRSF5-212ENST00000556184 ZFP2Q6ZN57 461 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 C9orf47Q6ZRZ4 202 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 TEX29Q8N6K0 151 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 C11orf21Q9P2W6 132 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 DPM3Q9P2X0 92 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 ACACAQ13085 2346 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 A0A0G2JNJ9 132 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 RPL32P62910 135 aaKnown RBP8.1□□□□□ -1.11
SRSF5-212ENST00000556184 ADORA2A-AS1P86434 159 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 Q6Q795 121 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 BAALCQ8WXS3 180 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 ANAPC13Q9BS18 74 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 AGPAT4-IT1Q9H0P7 198 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 Q9UFV3 132 aa8.1□□□□□ -1.11
SRSF5-212ENST00000556184 INTS1Q8N201 2190 aaKnown RBP8.1□□□□□ -1.11
SRSF5-212ENST00000556184 IGHV1-69DA0A0B4J2H0 117 aa8.09□□□□□ -1.11
SRSF5-212ENST00000556184 LOC107984156A0A0G2JMH3 177 aa8.09□□□□□ -1.11
SRSF5-212ENST00000556184 BUB3O43684 328 aa8.09□□□□□ -1.11
SRSF5-212ENST00000556184 PRB4P10163 310 aaPredicted RBP8.09□□□□□ -1.11
SRSF5-212ENST00000556184 BSPH1Q075Z2 132 aa8.09□□□□□ -1.11
SRSF5-212ENST00000556184 SPANXN1Q5VSR9 72 aa8.09□□□□□ -1.11
SRSF5-212ENST00000556184 SCGB1D4Q6XE38 83 aa8.09□□□□□ -1.11
SRSF5-212ENST00000556184 ARL17AQ8IVW1 177 aa8.09□□□□□ -1.11
SRSF5-212ENST00000556184 LY6G5BQ8NDX9 201 aa8.09□□□□□ -1.11
SRSF5-212ENST00000556184 A0A0J9YY99 117 aa8.09□□□□□ -1.11
SRSF5-212ENST00000556184 RHODO00212 210 aa8.09□□□□□ -1.11
SRSF5-212ENST00000556184 HLA-DMBP28068 263 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms