RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 C9orf66Q5T8R8 295 aa7.05□□□□□ -1.28
SIX1-204ENST00000555627 TRPT1Q86TN4 253 aaKnown RBP7.05□□□□□ -1.28
SIX1-204ENST00000555627 WFDC9Q8NEX5 89 aa7.05□□□□□ -1.28
SIX1-204ENST00000555627 NUP35Q8NFH5 326 aa7.05□□□□□ -1.28
SIX1-204ENST00000555627 FAM210BQ96KR6 192 aa7.05□□□□□ -1.28
SIX1-204ENST00000555627 CLUHP3Q96NS8 147 aa7.05□□□□□ -1.28
SIX1-204ENST00000555627 FAM110AQ9BQ89 295 aa7.05□□□□□ -1.28
SIX1-204ENST00000555627 HIGD1CA8MV81 97 aa7.04□□□□□ -1.28
SIX1-204ENST00000555627 IGKV3-20P01619 116 aa7.04□□□□□ -1.28
SIX1-204ENST00000555627 S100PP25815 95 aa7.04□□□□□ -1.28
SIX1-204ENST00000555627 SPINK13Q1W4C9 94 aa7.04□□□□□ -1.28
SIX1-204ENST00000555627 EBLN2Q6P2I7 272 aa7.04□□□□□ -1.28
SIX1-204ENST00000555627 KCNIP4Q6PIL6 250 aa7.04□□□□□ -1.28
SIX1-204ENST00000555627 GFRA4Q9GZZ7 299 aa7.04□□□□□ -1.28
SIX1-204ENST00000555627 TRAV12-2A0A075B6T6 113 aa7.03□□□□□ -1.28
SIX1-204ENST00000555627 TMSB15BA0A087X1C1 80 aa7.03□□□□□ -1.28
SIX1-204ENST00000555627 C7orf71A4D174 169 aa7.03□□□□□ -1.28
SIX1-204ENST00000555627 FAM231BA6NCW3 169 aa7.03□□□□□ -1.28
SIX1-204ENST00000555627 FABP5P3A8MUU1 101 aa7.03□□□□□ -1.28
SIX1-204ENST00000555627 A8MWL6 223 aa7.03□□□□□ -1.28
SIX1-204ENST00000555627 OR11H12B2RN74 326 aa7.03□□□□□ -1.28
SIX1-204ENST00000555627 LEPP41159 167 aa7.03□□□□□ -1.28
SIX1-204ENST00000555627 INSL3P51460 131 aa7.03□□□□□ -1.28
SIX1-204ENST00000555627 FOXA3P55318 350 aaPredicted RBP7.03□□□□□ -1.28
SIX1-204ENST00000555627 SHISA2Q6UWI4 295 aa7.03□□□□□ -1.28
SIX1-204ENST00000555627 DAZAP1Q96EP5 407 aaKnown RBP7.03□□□□□ -1.28
SIX1-204ENST00000555627 SRD5A3Q9H8P0 318 aa7.03□□□□□ -1.28
SIX1-204ENST00000555627 DYNC2H1Q8NCM8 4307 aaKnown RBP7.02□□□□□ -1.29
SIX1-204ENST00000555627 TRAV21A0A0B4J279 112 aa7.02□□□□□ -1.29
SIX1-204ENST00000555627 TMEM189A5PLL7 270 aa7.02□□□□□ -1.29
SIX1-204ENST00000555627 ZNF324O75467 553 aaPredicted RBP7.02□□□□□ -1.29
SIX1-204ENST00000555627 GIG44P09565 113 aaPredicted RBP7.02□□□□□ -1.29
SIX1-204ENST00000555627 ARMS2P0C7Q2 107 aa7.02□□□□□ -1.29
SIX1-204ENST00000555627 IGLL1P15814 213 aa7.02□□□□□ -1.29
SIX1-204ENST00000555627 CDKN1BP46527 198 aa7.02□□□□□ -1.29
SIX1-204ENST00000555627 MRPL54Q6P161 138 aaKnown RBP7.02□□□□□ -1.29
SIX1-204ENST00000555627 TMEM136Q6ZRR5 245 aa7.02□□□□□ -1.29
SIX1-204ENST00000555627 GATD1Q8NB37 220 aa7.02□□□□□ -1.29
SIX1-204ENST00000555627 BTF3L4Q96K17 158 aa7.02□□□□□ -1.29
SIX1-204ENST00000555627 CNFNQ9BYD5 112 aa7.02□□□□□ -1.29
SIX1-204ENST00000555627 NAT8BQ9UHF3 227 aa7.02□□□□□ -1.29
SIX1-204ENST00000555627 TMA7Q9Y2S6 64 aaKnown RBP7.02□□□□□ -1.29
SIX1-204ENST00000555627 GRIFINA4D1Z8 144 aa7.01□□□□□ -1.29
SIX1-204ENST00000555627 SNAI2O43623 268 aa7.01□□□□□ -1.29
SIX1-204ENST00000555627 SPINK4O60575 86 aa7.01□□□□□ -1.29
SIX1-204ENST00000555627 GPX1P07203 203 aa7.01□□□□□ -1.29
SIX1-204ENST00000555627 RNASE4P34096 147 aaKnown RBP7.01□□□□□ -1.29
SIX1-204ENST00000555627 FXYD7P58549 80 aa7.01□□□□□ -1.29
SIX1-204ENST00000555627 RPS20P60866 119 aaKnown RBP7.01□□□□□ -1.29
SIX1-204ENST00000555627 ANXA2RQ3ZCQ2 193 aa7.01□□□□□ -1.29
SIX1-204ENST00000555627 DNLZQ5SXM8 178 aa7.01□□□□□ -1.29
SIX1-204ENST00000555627 ATP5L2Q7Z4Y8 100 aa7.01□□□□□ -1.29
SIX1-204ENST00000555627 PGLYRP4Q96LB8 373 aa7.01□□□□□ -1.29
SIX1-204ENST00000555627 COL7A1Q02388 2944 aa7□□□□□ -1.29
SIX1-204ENST00000555627 TRAV12-3A0A0B4J271 114 aa7□□□□□ -1.29
SIX1-204ENST00000555627 RNASE3P12724 160 aaKnown RBP7□□□□□ -1.29
SIX1-204ENST00000555627 RPS10P46783 165 aaKnown RBP7□□□□□ -1.29
SIX1-204ENST00000555627 TDRG1Q3Y452 100 aa7□□□□□ -1.29
SIX1-204ENST00000555627 MUC21Q5SSG8 566 aa7□□□□□ -1.29
SIX1-204ENST00000555627 FER1L6-AS1Q8NA97 138 aa7□□□□□ -1.29
SIX1-204ENST00000555627 MCRIP2Q9BUT9 160 aaKnown RBP7□□□□□ -1.29
SIX1-204ENST00000555627 NAGKQ9UJ70 344 aa7□□□□□ -1.29
SIX1-204ENST00000555627 H3BVH4 76 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 NXPH4O95158 308 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 ORM1P02763 201 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 TRGC2P03986 189 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 MED14OSP0DP75 135 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 TSPOP30536 169 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 HBBP68871 147 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 RASL11AQ6T310 242 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 LYZL1Q6UWQ5 148 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 Q8N1Y9 231 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 FRZBQ92765 325 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 SSBP4Q9BWG4 385 aaPredicted RBP6.99□□□□□ -1.29
SIX1-204ENST00000555627 SCRT2Q9NQ03 307 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 TP53TG3Q9ULZ0 132 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 SACSQ9NZJ4 4579 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 TENM2Q9NT68 2774 aa6.99□□□□□ -1.29
SIX1-204ENST00000555627 A0A1B0GUT8 65 aa6.98□□□□□ -1.29
SIX1-204ENST00000555627 SNURFLB1AK76 121 aa6.98□□□□□ -1.29
SIX1-204ENST00000555627 OR5AL1P0C617 328 aa6.98□□□□□ -1.29
SIX1-204ENST00000555627 EGFEM1PQ0D2K5 195 aa6.98□□□□□ -1.29
SIX1-204ENST00000555627 SLAQ13239 276 aa6.98□□□□□ -1.29
SIX1-204ENST00000555627 STHQ8IWL8 128 aa6.98□□□□□ -1.29
SIX1-204ENST00000555627 ZFP82Q8N141 532 aa6.98□□□□□ -1.29
SIX1-204ENST00000555627 DEFB125Q8N687 156 aa6.98□□□□□ -1.29
SIX1-204ENST00000555627 OR10AG1Q8NH19 301 aa6.98□□□□□ -1.29
SIX1-204ENST00000555627 C9orf85Q96MD7 179 aa6.98□□□□□ -1.29
SIX1-204ENST00000555627 IGHV1OR15-1A0A075B7D0 117 aa6.97□□□□□ -1.29
SIX1-204ENST00000555627 IGHV3-16A0A0C4DH30 117 aa6.97□□□□□ -1.29
SIX1-204ENST00000555627 MUC21A0A0G2JKD1 596 aa6.97□□□□□ -1.29
SIX1-204ENST00000555627 MUC21A0A140T8X8 626 aa6.97□□□□□ -1.29
SIX1-204ENST00000555627 XKRY2A2RUG3 117 aa6.97□□□□□ -1.29
SIX1-204ENST00000555627 SPRY2O43597 315 aa6.97□□□□□ -1.29
SIX1-204ENST00000555627 HIST1H2BKO60814 126 aa6.97□□□□□ -1.29
SIX1-204ENST00000555627 INSP01308 110 aa6.97□□□□□ -1.29
SIX1-204ENST00000555627 HLA-DQA1P01909 254 aa6.97□□□□□ -1.29
SIX1-204ENST00000555627 HIST1H2BJP06899 126 aa6.97□□□□□ -1.29
SIX1-204ENST00000555627 HIST1H2BOP23527 126 aa6.97□□□□□ -1.29
SIX1-204ENST00000555627 HIST1H2BBP33778 126 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms