RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 J3QLW9 94 aa2.06□□□□□ -2.08
VRK1-205ENST00000555402 PITX3O75364 302 aa2.06□□□□□ -2.08
VRK1-205ENST00000555402 HIST1H1DP16402 221 aaKnown RBP2.06□□□□□ -2.08
VRK1-205ENST00000555402 TEX261Q6UWH6 196 aa2.06□□□□□ -2.08
VRK1-205ENST00000555402 GTF2H5Q6ZYL4 71 aa2.06□□□□□ -2.08
VRK1-205ENST00000555402 C8orf59Q8N0T1 100 aaPredicted RBP2.06□□□□□ -2.08
VRK1-205ENST00000555402 Q8TAT8 98 aa2.06□□□□□ -2.08
VRK1-205ENST00000555402 SEC11CQ9BY50 192 aa2.06□□□□□ -2.08
VRK1-205ENST00000555402 NAA60Q9H7X0 242 aa2.06□□□□□ -2.08
VRK1-205ENST00000555402 KTN1Q86UP2 1357 aaKnown RBP2.06□□□□□ -2.08
VRK1-205ENST00000555402 CXCL8P10145 99 aa2.05□□□□□ -2.08
VRK1-205ENST00000555402 BRS3P32247 399 aa2.05□□□□□ -2.08
VRK1-205ENST00000555402 ZCCHC23Q6ZST2 131 aa2.05□□□□□ -2.08
VRK1-205ENST00000555402 ZNF833PQ6ZTB9 187 aa2.05□□□□□ -2.08
VRK1-205ENST00000555402 ATP6V0E2Q8NHE4 81 aa2.05□□□□□ -2.08
VRK1-205ENST00000555402 ZNF563Q8TA94 476 aa2.05□□□□□ -2.08
VRK1-205ENST00000555402 TTC37Q6PGP7 1564 aa2.05□□□□□ -2.08
VRK1-205ENST00000555402 RB1CC1Q8TDY2 1594 aa2.05□□□□□ -2.08
VRK1-205ENST00000555402 LAMB2P55268 1798 aa2.05□□□□□ -2.08
VRK1-205ENST00000555402 TMEM218A2RU14 115 aa2.04□□□□□ -2.08
VRK1-205ENST00000555402 ADCYAP1P18509 176 aa2.04□□□□□ -2.08
VRK1-205ENST00000555402 MRPL54Q6P161 138 aaKnown RBP2.04□□□□□ -2.08
VRK1-205ENST00000555402 ATP11AUNQ6ZP68 121 aa2.04□□□□□ -2.08
VRK1-205ENST00000555402 GKN2Q86XP6 184 aa2.04□□□□□ -2.08
VRK1-205ENST00000555402 VSTM2AQ8TAG5 236 aa2.04□□□□□ -2.08
VRK1-205ENST00000555402 AGPAT4-IT1Q9H0P7 198 aa2.04□□□□□ -2.08
VRK1-205ENST00000555402 MAPKBP1O60336 1514 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 ZNF609O15014 1411 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 TRAV14DV4A0A0A6YYC5 116 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 TNFP01375 233 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 CATR1Q13166 79 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 PDE6HQ13956 83 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 FOXI2Q6ZQN5 318 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 C3orf62Q6ZUJ4 267 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 ACBD7Q8N6N7 88 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 TAS2R8Q9NYW2 309 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 CHCHD2Q9Y6H1 151 aaPredicted RBP2.03□□□□□ -2.08
VRK1-205ENST00000555402 SERP1Q9Y6X1 66 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 CUL9Q8IWT3 2517 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 NUMA1Q14980 2115 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 AKAP11Q9UKA4 1901 aa2.03□□□□□ -2.08
VRK1-205ENST00000555402 FBN1P35555 2871 aaKnown RBP2.03□□□□□ -2.08
VRK1-205ENST00000555402 PLXNA4Q9HCM2 1894 aa2.03□□□□□ -2.09
VRK1-205ENST00000555402 LRP5O75197 1615 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 TRAV30A0A087WSZ9 112 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 MCRIP1C9JLW8 97 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 M0R143 59 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 GEMIN2O14893 280 aaKnown RBP2.02□□□□□ -2.09
VRK1-205ENST00000555402 CCL25O15444 150 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 KLF7O75840 302 aaPredicted RBP2.02□□□□□ -2.09
VRK1-205ENST00000555402 IFNA17P01571 189 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 HSD52Q0P140 79 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 MIR22HGQ0VDD5 57 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 Q1T7F1 81 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 Q56UQ5 140 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 C9orf153Q5TBE3 101 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 Q6AWC8 147 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 FP248Q71RG6 208 aaPredicted RBP2.02□□□□□ -2.09
VRK1-205ENST00000555402 ZNF431Q8TF32 576 aaPredicted RBP2.02□□□□□ -2.09
VRK1-205ENST00000555402 MRPL57Q9BQC6 102 aaKnown RBP2.02□□□□□ -2.09
VRK1-205ENST00000555402 ANK1P16157 1881 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 FN1P02751 2386 aaKnown RBP2.02□□□□□ -2.09
VRK1-205ENST00000555402 LAMB4A4D0S4 1761 aa2.02□□□□□ -2.09
VRK1-205ENST00000555402 ABCC10Q5T3U5 1492 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 RAPGEF2Q9Y4G8 1499 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 TRPM7Q96QT4 1865 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 ANKRD26Q9UPS8 1709 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 TRBV6-5A0A0K0K1A5 114 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 IL5P05113 134 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 PKIAP61925 76 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 C1orf137Q5JT78 98 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 NCMAPQ5T1S8 102 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 OR2T2Q6IF00 324 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 SLC25A26Q70HW3 274 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 PLPP5Q8NEB5 264 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 LSM10Q969L4 123 aaKnown RBP2.01□□□□□ -2.09
VRK1-205ENST00000555402 RPRMQ9NS64 109 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 IER3IP1Q9Y5U9 82 aa2.01□□□□□ -2.09
VRK1-205ENST00000555402 MICAL3Q7RTP6 2002 aa2□□□□□ -2.09
VRK1-205ENST00000555402 SCN3AQ9NY46 2000 aa2□□□□□ -2.09
VRK1-205ENST00000555402 ALPK3Q96L96 1907 aa2□□□□□ -2.09
VRK1-205ENST00000555402 APOC4-APOC2K7ER74 178 aa2□□□□□ -2.09
VRK1-205ENST00000555402 APOC2P02655 101 aa2□□□□□ -2.09
VRK1-205ENST00000555402 GNG2P59768 71 aa2□□□□□ -2.09
VRK1-205ENST00000555402 KRTAP26-1Q6PEX3 210 aa2□□□□□ -2.09
VRK1-205ENST00000555402 SVBPQ8N300 66 aa2□□□□□ -2.09
VRK1-205ENST00000555402 DYNLRB2Q8TF09 96 aa2□□□□□ -2.09
VRK1-205ENST00000555402 SPTSSAQ969W0 71 aa2□□□□□ -2.09
VRK1-205ENST00000555402 SPANXDQ9BXN6 97 aa2□□□□□ -2.09
VRK1-205ENST00000555402 TMEM242Q9NWH2 141 aa2□□□□□ -2.09
VRK1-205ENST00000555402 FCGBPQ9Y6R7 5405 aaPredicted RBP2□□□□□ -2.09
VRK1-205ENST00000555402 KIAA1549Q9HCM3 1950 aa1.99□□□□□ -2.09
VRK1-205ENST00000555402 SORL1Q92673 2214 aa1.99□□□□□ -2.09
VRK1-205ENST00000555402 CC2D2AQ9P2K1 1620 aa1.99□□□□□ -2.09
VRK1-205ENST00000555402 TRBV6-8A0A0A6YYG3 113 aa1.99□□□□□ -2.09
VRK1-205ENST00000555402 TRAV17A0A0B4J275 112 aa1.99□□□□□ -2.09
VRK1-205ENST00000555402 IGKV2-29A2NJV5 120 aaPredicted RBP1.99□□□□□ -2.09
VRK1-205ENST00000555402 PRB4P10163 310 aaPredicted RBP1.99□□□□□ -2.09
VRK1-205ENST00000555402 S100A10P60903 97 aa1.99□□□□□ -2.09
VRK1-205ENST00000555402 Q6ZS92 163 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms