RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 MED13LQ71F56 2210 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 HERC2O95714 4834 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 A0A087WXM4 84 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 TRGV10A0A0A0MS01 117 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 A0A0G2JQZ4 141 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 MCRIP1C9JLW8 97 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 M0R1W7 72 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 DEGS1O15121 323 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 SULT1B1O43704 296 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 TTRP02766 147 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 ERP29P30040 261 aaKnown RBP2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 BRS3P32247 399 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 ZNF93P35789 620 aaPredicted RBP2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 FXYD7P58549 80 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 KISS1Q15726 138 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 C6orf52Q5T4I8 152 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 TMEM42Q69YG0 159 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 HAGHLQ6PII5 290 aaPredicted RBP2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 IZUMO2Q6UXV1 221 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 SLC35E3Q7Z769 313 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 IQCF2Q8IXL9 164 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 TMEM86BQ8N661 226 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR8B12Q8NGG6 310 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR13D1Q8NGV5 346 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 AQP3Q92482 292 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 SLC7A6Q92536 515 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 TMEM106AQ96A25 262 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 CEP19Q96LK0 163 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 HRASLSQ9HDD0 168 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 SSR3Q9UNL2 185 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 WNK2Q9Y3S1 2297 aa2.14□□□□□ -2.07
CKS1BP1-201ENST00000555221 ARFGEF3Q5TH69 2177 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 MALRD1Q5VYJ5 2156 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 CUBNO60494 3623 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 KIAA1549Q9HCM3 1950 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 TRAV1-2A0A0B4J238 106 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 TRAV41A0A0B4J266 112 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 PIGBOS1A0A0B4J2F0 54 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 SMIM31A0A1B0GVY4 71 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 LOC107986453A0A1B0GWG9 222 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 PQLC2LA1A4F0 135 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 RFPL4AA6NLU0 287 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR4C45A6NMZ5 311 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 OOSP1A8MZH6 123 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 RFPL4AL1F8VTS6 287 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 M0QZK8 103 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 IGLV3-1P01715 115 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 REG1AP05451 166 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 CSN2P05814 226 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 CTXN2P0C2S0 81 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 RPS27P42677 84 aaKnown RBP2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 AP2S1P53680 142 aaPredicted RBP2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 ERVS71-1P61550 626 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 ERHP84090 104 aaKnown RBP2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 CDK5R1Q15078 307 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 MPV17LQ2QL34 196 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 ACSM3Q53FZ2 586 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 HSD17B12Q53GQ0 312 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 SAPCD1Q5SSQ6 148 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 Q6ZTI0 123 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 SLC25A26Q70HW3 274 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 ANGPTL5Q86XS5 388 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 DEFB108BQ8NET1 73 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR51T1Q8NGJ9 327 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 BORCS5Q969J3 196 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 MALSU1Q96EH3 234 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 CNBD2Q96M20 576 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 ABRACLQ9P1F3 81 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 HHLA3Q9XRX5 114 aa2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 AMMECR1Q9Y4X0 333 aaPredicted RBP2.13□□□□□ -2.07
CKS1BP1-201ENST00000555221 SONP18583 2426 aaKnown RBP2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 ANK2Q01484 3957 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 TRDV1A0A1B0GX56 115 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 LYNX1G3V0Z9 82 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 J3QQQ9 107 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 COX7A2LO14548 114 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 ORC5O43913 435 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 HAND1O96004 215 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 GYPAP02724 150 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 LYNX1P0DP58 116 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 S100GP29377 79 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 MAP2K4P45985 399 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 AQP4P55087 323 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 ARPC4P59998 168 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 GRK1Q15835 563 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 LRRC75BQ2VPJ9 315 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 C1orf194Q5T5A4 169 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 C1orf195Q5TG92 126 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 MINOS1Q5TGZ0 78 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 TRAPPC6BQ86SZ2 158 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 NEK7Q8TDX7 302 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 ACOT12Q8WYK0 555 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 H1FXQ92522 213 aaKnown RBP2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 AP3S1Q92572 193 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 S100A16Q96FQ6 103 aaKnown RBP2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 ZNF714Q96N38 554 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 AMELYQ99218 206 aa2.12□□□□□ -2.07
CKS1BP1-201ENST00000555221 AK3Q9UIJ7 227 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms