RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956		Q6ZVH6	145 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	BAP18	Q8IXM2	172 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	RNF182	Q8N6D2	247 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	C14orf178	Q8N769	122 aa	Predicted RBP	3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	OR11H7	Q8NGC8	314 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	COQ8A	Q8NI60	647 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	SMIM4	Q8WVI0	70 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	FAM210B	Q96KR6	192 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	IGF2BP2-AS1	Q96M15	143 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	RSG1	Q9BU20	258 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	TREM1	Q9NP99	234 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	C14orf166	Q9Y224	244 aa	Known RBP	3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	LINC00588	Q9Y4M8	146 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956		U3KQ87	197 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956		A0A0B4J2A0	478 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	NBDY	A0A0U1RRE5	68 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	ANKRD20A5P	A0PJZ0	165 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	ZNF98	A6NK75	572 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	LYRM9	A8MSI8	78 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	CENPX	A8MT69	81 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	SNRPGP15	A8MWD9	76 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	ISLR	O14498	428 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	HBE1	P02100	147 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	AKAIN1	P0CW23	69 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	AKR1C4	P17516	323 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	FUS	P35637	526 aa	Known RBP eCLIP	3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	GPX4	P36969	197 aa	Predicted RBP	3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	CCR6	P51684	374 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	C1orf194	Q5T5A4	169 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	CLVS1	Q8IUQ0	354 aa	Predicted RBP	3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	OR8I2	Q8N0Y5	310 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	NKAPP1	Q8N9T2	125 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	IL22RA2	Q969J5	263 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	LINC00167	Q96N53	147 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	TRGV9	Q99603	122 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	C7orf50	Q9BRJ6	194 aa	Known RBP	3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	SLC25A22	Q9H936	323 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	VCX3A	Q9NNX9	186 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	DOK5	Q9P104	306 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	SHPK	Q9UHJ6	478 aa		3.38	□□□□□ -1.87
PSMC6-208	ENST00000554956	DISC1	C4P0D8	188 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956		F5H768	121 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	SMKR1	H3BMG3	65 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	RGS5	O15539	181 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	CCNK	O75909	580 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	ORM2	P19652	201 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	SSBP1	Q04837	148 aa	Known RBP	3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	CLINT1	Q14677	625 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	EBLN2	Q6P2I7	272 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	OR1S1	Q8NH92	325 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	DYNC2LI1	Q8TCX1	351 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	C7orf33	Q8WU49	177 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	AP3S1	Q92572	193 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	PPP1R14B	Q96C90	147 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	SLC35E1	Q96K37	410 aa		3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	PARD6G	Q9BYG4	376 aa	Predicted RBP	3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	PAIP2B	Q9ULR5	123 aa	Known RBP	3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	APOB	P04114	4563 aa	Known RBP	3.37	□□□□□ -1.87
PSMC6-208	ENST00000554956	NACA	E9PAV3	2078 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	RAB19	A4D1S5	217 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956		H3BP45	60 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956		H3BRN7	92 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	HTN1	P15515	57 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	CXCL3	P19876	107 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	TSPO	P30536	169 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	SPATA31B1P	Q5VZV4	182 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	PATE2	Q6UY27	113 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	SSX7	Q7RTT5	188 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	SPATA12	Q7Z6I5	190 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	TMED4	Q7Z7H5	227 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	C15orf53	Q8NAA6	179 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	C15orf40	Q8WUR7	153 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	DIRAS2	Q96HU8	199 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	PRRT1	Q99946	306 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	SHANK2-AS3	Q9BTD1	123 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	TMEM208	Q9BTX3	173 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	SLIRP	Q9GZT3	109 aa	Known RBP	3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	RPRM	Q9NS64	109 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956	MCUB	Q9NWR8	336 aa		3.36	□□□□□ -1.87
PSMC6-208	ENST00000554956		A0A0J9YY99	117 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956		H0Y9J4	135 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	SYNGR2	O43760	224 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	ADAP1	O75689	374 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	INS	P01308	110 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	GALR1	P47211	349 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	MRPS10	P82664	201 aa	Known RBP	3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	HIST1H1A	Q02539	215 aa	Predicted RBP	3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	PPP1R1A	Q13522	171 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	VAMP3	Q15836	100 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	ZNF726P1	Q15940	193 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	ESRG	Q1W209	222 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	SPANXN5	Q5MJ07	72 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	CYP2G1P	Q6ZSU1	146 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	OR8A1	Q8NGG7	326 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	RPUSD4	Q96CM3	377 aa	Known RBP	3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	LINC01587	Q99440	93 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	NOP10	Q9NPE3	64 aa	Known RBP	3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	PRO0461	Q9UI25	63 aa		3.35	□□□□□ -1.87
PSMC6-208	ENST00000554956	DNAH5	Q8TE73	4624 aa		3.35	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 103 ms