RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SIGLEC9Q9Y336 463 aa12.12□□□□□ -0.47
SYNE3-203ENST00000554873 ZGRF1Q86YA3 2104 aa12.12□□□□□ -0.47
SYNE3-203ENST00000554873 DMXL2Q8TDJ6 3036 aa12.11□□□□□ -0.47
SYNE3-203ENST00000554873 M0R3E3 92 aa12.11□□□□□ -0.47
SYNE3-203ENST00000554873 COX8CQ7Z4L0 72 aa12.11□□□□□ -0.47
SYNE3-203ENST00000554873 PRSS33Q8NF86 280 aa12.11□□□□□ -0.47
SYNE3-203ENST00000554873 CNFNQ9BYD5 112 aa12.11□□□□□ -0.47
SYNE3-203ENST00000554873 ADGRG4Q8IZF6 3080 aa12.11□□□□□ -0.47
SYNE3-203ENST00000554873 ONECUT1Q9UBC0 465 aa12.11□□□□□ -0.47
SYNE3-203ENST00000554873 A0A0G2JNJ9 132 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 C9JAW5 83 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 PRADC1Q9BSG0 188 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 Q9UFV3 132 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 KALRNO60229 2985 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 DMXL1Q9Y485 3027 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 TEX22C9J3V5 150 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 ASCL5Q7RTU5 278 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 Q8N1Y9 231 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 C10orf126Q8N4M7 172 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 LINC01587Q99440 93 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 TRAV8-4A0A0B4J246 113 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 PLEKHB2Q96CS7 222 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 DNAJC30Q96LL9 226 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 SHANK2-AS3Q9BTD1 123 aa12.1□□□□□ -0.47
SYNE3-203ENST00000554873 TPRP12270 2363 aaKnown RBP12.09□□□□□ -0.47
SYNE3-203ENST00000554873 KAAG1Q9UBP8 84 aa12.09□□□□□ -0.47
SYNE3-203ENST00000554873 EFNA4P52798 201 aa12.09□□□□□ -0.47
SYNE3-203ENST00000554873 RNASE6Q93091 150 aaKnown RBP12.09□□□□□ -0.47
SYNE3-203ENST00000554873 PRR25Q96S07 402 aa12.09□□□□□ -0.47
SYNE3-203ENST00000554873 NTN5Q8WTR8 489 aaPredicted RBP12.08□□□□□ -0.48
SYNE3-203ENST00000554873 DTX2Q86UW9 622 aa12.08□□□□□ -0.48
SYNE3-203ENST00000554873 IGHV1-3A0A0C4DH29 117 aa12.07□□□□□ -0.48
SYNE3-203ENST00000554873 H3BRN7 92 aa12.07□□□□□ -0.48
SYNE3-203ENST00000554873 I3L2K1 104 aa12.07□□□□□ -0.48
SYNE3-203ENST00000554873 CFC1BP0CG36 223 aa12.07□□□□□ -0.48
SYNE3-203ENST00000554873 CFC1P0CG37 223 aa12.07□□□□□ -0.48
SYNE3-203ENST00000554873 MRPL23Q16540 153 aaKnown RBP12.07□□□□□ -0.48
SYNE3-203ENST00000554873 IGKV1-17P01599 117 aa12.07□□□□□ -0.48
SYNE3-203ENST00000554873 IGLV1-47P01700 117 aa12.07□□□□□ -0.48
SYNE3-203ENST00000554873 COX6B1P14854 86 aa12.07□□□□□ -0.48
SYNE3-203ENST00000554873 SRSF2Q01130 221 aaKnown RBP12.07□□□□□ -0.48
SYNE3-203ENST00000554873 VKORC1Q9BQB6 163 aa12.07□□□□□ -0.48
SYNE3-203ENST00000554873 ZZEF1O43149 2961 aa12.07□□□□□ -0.48
SYNE3-203ENST00000554873 HLA-DMBP28068 263 aa12.06□□□□□ -0.48
SYNE3-203ENST00000554873 RPL13AP40429 203 aaKnown RBP12.06□□□□□ -0.48
SYNE3-203ENST00000554873 CRIP2P52943 208 aaPredicted RBP12.06□□□□□ -0.48
SYNE3-203ENST00000554873 LY6DQ14210 128 aa12.06□□□□□ -0.48
SYNE3-203ENST00000554873 IGF2-ASQ6U949 168 aa12.06□□□□□ -0.48
SYNE3-203ENST00000554873 ZNF575Q86XF7 245 aa12.06□□□□□ -0.48
SYNE3-203ENST00000554873 PRO1854Q9UHT4 67 aa12.06□□□□□ -0.48
SYNE3-203ENST00000554873 TRAV2A0A0B4J234 112 aa12.06□□□□□ -0.48
SYNE3-203ENST00000554873 SLC25A16P16260 332 aa12.06□□□□□ -0.48
SYNE3-203ENST00000554873 C21orf62Q9NYP8 219 aa12.06□□□□□ -0.48
SYNE3-203ENST00000554873 BUB1B-PAK6H3BSN5 160 aa12.05□□□□□ -0.48
SYNE3-203ENST00000554873 MRPS12O15235 138 aaKnown RBP12.05□□□□□ -0.48
SYNE3-203ENST00000554873 DYNLRB1Q9NP97 96 aa12.05□□□□□ -0.48
SYNE3-203ENST00000554873 GVINP1Q7Z2Y8 2422 aa12.05□□□□□ -0.48
SYNE3-203ENST00000554873 TTC28Q96AY4 2481 aa12.05□□□□□ -0.48
SYNE3-203ENST00000554873 POLEQ07864 2286 aa12.05□□□□□ -0.48
SYNE3-203ENST00000554873 DUSP14O95147 198 aaKnown RBP12.05□□□□□ -0.48
SYNE3-203ENST00000554873 ZNF80P51504 273 aaPredicted RBP12.05□□□□□ -0.48
SYNE3-203ENST00000554873 PDE6HQ13956 83 aa12.05□□□□□ -0.48
SYNE3-203ENST00000554873 C3orf56Q8N813 242 aa12.05□□□□□ -0.48
SYNE3-203ENST00000554873 CHCHD5Q9BSY4 110 aa12.05□□□□□ -0.48
SYNE3-203ENST00000554873 FOXC1Q12948 553 aa12.04□□□□□ -0.48
SYNE3-203ENST00000554873 NRACQ8N912 160 aa12.04□□□□□ -0.48
SYNE3-203ENST00000554873 NEXN-AS1Q8NBZ9 246 aa12.04□□□□□ -0.48
SYNE3-203ENST00000554873 LINC01600Q96MT4 127 aa12.04□□□□□ -0.48
SYNE3-203ENST00000554873 E7EQL1 145 aa12.04□□□□□ -0.48
SYNE3-203ENST00000554873 ORM1P02763 201 aa12.04□□□□□ -0.48
SYNE3-203ENST00000554873 TRPT1Q86TN4 253 aaKnown RBP12.04□□□□□ -0.48
SYNE3-203ENST00000554873 A0A0J9YY99 117 aa12.03□□□□□ -0.48
SYNE3-203ENST00000554873 TACC2O95359 2948 aa12.03□□□□□ -0.48
SYNE3-203ENST00000554873 IGKV2-40A0A087WW87 121 aaPredicted RBP12.03□□□□□ -0.48
SYNE3-203ENST00000554873 IGKV2D-40P01614 121 aaPredicted RBP12.03□□□□□ -0.48
SYNE3-203ENST00000554873 LINC00694P0DN24 101 aa12.03□□□□□ -0.48
SYNE3-203ENST00000554873 PSMG3-AS1Q96PY0 264 aa12.03□□□□□ -0.48
SYNE3-203ENST00000554873 SCGB3A1Q96QR1 104 aa12.03□□□□□ -0.48
SYNE3-203ENST00000554873 K7EIM0 57 aa12.02□□□□□ -0.48
SYNE3-203ENST00000554873 TIMM23O14925 209 aa12.02□□□□□ -0.48
SYNE3-203ENST00000554873 IGHV3-30P01768 117 aa12.02□□□□□ -0.48
SYNE3-203ENST00000554873 IGHV3-30-5P0DP03 117 aa12.02□□□□□ -0.48
SYNE3-203ENST00000554873 COX7A1P24310 79 aa12.02□□□□□ -0.48
SYNE3-203ENST00000554873 ACACAQ13085 2346 aa12.02□□□□□ -0.49
SYNE3-203ENST00000554873 SMIM9A6NGZ8 99 aa12.02□□□□□ -0.49
SYNE3-203ENST00000554873 APC2O95996 2303 aa12.02□□□□□ -0.49
SYNE3-203ENST00000554873 LYNX1G3V0Z9 82 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 LGALS9O00182 355 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 LYNX1P0DP58 116 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 ATMQ13315 3056 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 BSNQ9UPA5 3926 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 TEX49A0A1B0GTD5 131 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 ZNF491Q8N8L2 437 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 TIMD4Q96H15 378 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 ZNF318Q5VUA4 2279 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 AKAP13Q12802 2813 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 P0DMU3 169 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 FAM231AP0DMU4 169 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 FAM231CP0DMU5 169 aa12.01□□□□□ -0.49
SYNE3-203ENST00000554873 IL17RELQ6ZVW7 336 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms