RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 KLLNB2CW77 178 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 H7BYZ3 331 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 SSNA1O43805 119 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 IGKV2D-40P01614 121 aaPredicted RBP2.89□□□□□ -1.95
VTI1B-203ENST00000554636 RLN2P04090 185 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 P0DMU3 169 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 FAM231AP0DMU4 169 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 FAM231CP0DMU5 169 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 HTN3P15516 51 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 LEPP41159 167 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 DAD1P61803 113 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 CYCSP99999 105 aaKnown RBP2.89□□□□□ -1.95
VTI1B-203ENST00000554636 ERCC8Q13216 396 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 BTN1A1Q13410 526 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 PDE6HQ13956 83 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 PRR9Q5T870 116 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 EXOC3-AS1Q8N2X6 119 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 ZFAND2AQ8N6M9 145 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 POM121L12Q8N7R1 296 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 OR10J6PQ8NGY7 276 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 TMEM263Q8WUH6 116 aaKnown RBP2.89□□□□□ -1.95
VTI1B-203ENST00000554636 FXYD5Q96DB9 178 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 PHYHIPLQ96FC7 376 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 C16orf74Q96GX8 76 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 LINC01587Q99440 93 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 MRPL32Q9BYC8 188 aaKnown RBP2.89□□□□□ -1.95
VTI1B-203ENST00000554636 SMIM3Q9BZL3 60 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 WFDC1Q9HC57 220 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 NOP10Q9NPE3 64 aaKnown RBP2.89□□□□□ -1.95
VTI1B-203ENST00000554636 KCNIP2Q9NS61 270 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 MBD2Q9UBB5 411 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 FUT9Q9Y231 359 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 ALG5Q9Y673 324 aa2.89□□□□□ -1.95
VTI1B-203ENST00000554636 TRAV12-3A0A0B4J271 114 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 A0A1B0GVY2 172 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 C7orf71A4D174 169 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 J3KRW8 73 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 RTL8CO15255 209 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 EIF3GO75821 320 aaKnown RBP eCLIP2.88□□□□□ -1.95
VTI1B-203ENST00000554636 PTTG1O95997 202 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 SLC25A5P05141 298 aaKnown RBP2.88□□□□□ -1.95
VTI1B-203ENST00000554636 OR10J4P0C629 311 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 NBEAP1P0C6P0 100 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 PET100P0DJ07 73 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 DEFB130BP0DP73 79 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 DEFB130AP0DP74 79 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 CRISP2P16562 243 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 RPL12P30050 165 aaKnown RBP2.88□□□□□ -1.95
VTI1B-203ENST00000554636 CD300CQ08708 224 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 LGALS9BQ3B8N2 356 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 KIAA1644Q3SXP7 199 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 ZNF493Q6ZR52 646 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 Q6ZR54 194 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 C15orf53Q8NAA6 179 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 C11orf72Q8NBR9 251 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 BLNKQ8WV28 456 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 LINC00477Q96M19 166 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 VGLL1Q99990 258 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 PYGO2Q9BRQ0 406 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 LINC00467Q9BRT7 94 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 PAXXQ9BUH6 204 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 AGPAT4-IT1Q9H0P7 198 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 OR51M1Q9H341 326 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 TIMM9Q9Y5J7 89 aa2.88□□□□□ -1.95
VTI1B-203ENST00000554636 IGLV2-18A0A075B6J9 118 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 RBAKDNA6NC62 111 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 C17orf112F2Z3M2 114 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 F5H768 121 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 M0R2N4 97 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 OR7C2O60412 319 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 ZNF324O75467 553 aaPredicted RBP2.87□□□□□ -1.95
VTI1B-203ENST00000554636 IFNA5P01569 189 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 ATP5G1P05496 136 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 NMBP08949 121 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 HTN1P15515 57 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 ATP5G3P48201 142 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 RAB2AP61019 212 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 UBE2L3P68036 154 aaKnown RBP2.87□□□□□ -1.95
VTI1B-203ENST00000554636 DAZ2Q13117 558 aaKnown RBP2.87□□□□□ -1.95
VTI1B-203ENST00000554636 KHDC3LQ587J8 217 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 Q5BKY6 102 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 Q6ZQT7 251 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 LINC00336Q6ZUF6 198 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 UBE2DNLQ8IWF7 75 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 Q8TAT8 98 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 SCGB1C1Q8TD33 95 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 C18orf15Q96N68 181 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 AQP10Q96PS8 301 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 Q9H3A6 140 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 ZNF492Q9P255 531 aa2.87□□□□□ -1.95
VTI1B-203ENST00000554636 TIMM8BQ9Y5J9 83 aaPredicted RBP2.87□□□□□ -1.95
VTI1B-203ENST00000554636 VPS13BQ7Z7G8 4022 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 A0A087X002 238 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 TRBV7-9A0A0J9YWB2 115 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 SNURFLB1AK76 121 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 G3V3Q6 166 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 SPINK4O60575 86 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 GIPP09681 153 aaPredicted RBP2.86□□□□□ -1.95
VTI1B-203ENST00000554636 M6PRP20645 277 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms