RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 SMIM7Q9BQ49 75 aa0.33□□□□□ -2.36
LINC00648-201ENST00000553747 METTL1Q9UBP6 276 aaKnown RBP0.33□□□□□ -2.36
LINC00648-201ENST00000553747 FRAS1Q86XX4 4008 aa0.33□□□□□ -2.36
LINC00648-201ENST00000553747 UHRF1BP1LA0JNW5 1464 aa0.33□□□□□ -2.36
LINC00648-201ENST00000553747 TMEM30CPA0ZSE6 113 aa0.32□□□□□ -2.36
LINC00648-201ENST00000553747 TMEM189A5PLL7 270 aa0.32□□□□□ -2.36
LINC00648-201ENST00000553747 TPST1O60507 370 aa0.32□□□□□ -2.36
LINC00648-201ENST00000553747 SLC25A5P05141 298 aaKnown RBP0.32□□□□□ -2.36
LINC00648-201ENST00000553747 HIST1H1BP16401 226 aaKnown RBP0.32□□□□□ -2.36
LINC00648-201ENST00000553747 CKS2P33552 79 aa0.32□□□□□ -2.36
LINC00648-201ENST00000553747 PSPHP78330 225 aa0.32□□□□□ -2.36
LINC00648-201ENST00000553747 DR1Q01658 176 aa0.32□□□□□ -2.36
LINC00648-201ENST00000553747 FXYD3Q14802 87 aa0.32□□□□□ -2.36
LINC00648-201ENST00000553747 HSD17B12Q53GQ0 312 aa0.32□□□□□ -2.36
LINC00648-201ENST00000553747 GLYATL3Q5SZD4 288 aa0.32□□□□□ -2.36
LINC00648-201ENST00000553747 ZCCHC6Q5VYS8 1495 aaKnown RBP0.32□□□□□ -2.36
LINC00648-201ENST00000553747 ZNF142P52746 1687 aaPredicted RBP0.32□□□□□ -2.36
LINC00648-201ENST00000553747 ASH1LQ9NR48 2969 aaKnown RBP0.32□□□□□ -2.36
LINC00648-201ENST00000553747 DLEC1Q9Y238 1755 aa0.32□□□□□ -2.36
LINC00648-201ENST00000553747 SPTBP11277 2137 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 BORCS7-ASMTA0A0B4J1R7 106 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 IGHV1-24A0A0C4DH33 117 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 HIGD1CA8MV81 97 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 CDC42EP2O14613 210 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 DEGS1O15121 323 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 TCRAP04437 139 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 KRTAP2-3P0C7H8 128 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 PCBD1P61457 104 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 PLGLB1Q02325 96 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 SPINK13Q1W4C9 94 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 LYPD5Q6UWN5 251 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 IDO2Q6ZQW0 420 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 MAGOHBQ96A72 148 aaKnown RBP0.31□□□□□ -2.36
LINC00648-201ENST00000553747 KRTAP2-4Q9BYR9 128 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 KRTAP2-1Q9BYU5 128 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 SLC35B3Q9H1N7 401 aa0.31□□□□□ -2.36
LINC00648-201ENST00000553747 MRPL40Q9NQ50 206 aaKnown RBP0.31□□□□□ -2.36
LINC00648-201ENST00000553747 MAP2P11137 1827 aaKnown RBP0.31□□□□□ -2.36
LINC00648-201ENST00000553747 TRAV2A0A0B4J234 112 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 A0A0G2JMM0 328 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 LY6G6CO95867 125 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 SCGB1A1P11684 91 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 SDC4P31431 198 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 RPL37P61927 97 aaKnown RBP0.3□□□□□ -2.36
LINC00648-201ENST00000553747 RHOHQ15669 191 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 CCDC153Q494R4 210 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 MORN2Q502X0 79 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 TMEM91Q6ZNR0 172 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 AKAP14Q86UN6 197 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 C5orf56Q8N8D9 126 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 TSKUQ8WUA8 353 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 MRPL36Q9P0J6 103 aaKnown RBP0.3□□□□□ -2.36
LINC00648-201ENST00000553747 COMMD3Q9UBI1 195 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 PLXNA2O75051 1894 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 CCDC171Q6TFL3 1326 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 CEP152O94986 1710 aa0.3□□□□□ -2.36
LINC00648-201ENST00000553747 KMT2DO14686 5537 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 MYH1P12882 1939 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 TRBV10-1A0A0K0K1A3 114 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 TNFSF15O95150 251 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 OR2H2O95918 312 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 IGKCP01834 107 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 CD3DP04234 171 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 PAEPP09466 180 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 TCTE3Q8IZS6 198 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 PPDPFLQ8WWR9 84 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 PYDC1Q8WXC3 89 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 LINC00208Q96KT6 92 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 ATG5Q9H1Y0 275 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 BANF2Q9H503 90 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 CALML5Q9NZT1 146 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 KNTC1P50748 2209 aa0.29□□□□□ -2.36
LINC00648-201ENST00000553747 ATG2AQ2TAZ0 1938 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 LOC101927531A0A1B0GV80 90 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 A0A1B0GW64 132 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 C9JAW5 83 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 YPEL1O60688 119 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 DBIP07108 87 aaKnown RBP0.28□□□□□ -2.36
LINC00648-201ENST00000553747 IL7P13232 177 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 HLA-DRB4P13762 266 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 AKR1D1P51857 326 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 POLR2JP52435 117 aaKnown RBP0.28□□□□□ -2.36
LINC00648-201ENST00000553747 KLKP1Q107X0 134 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 ZNF56Q15929 161 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 AIF1LQ9BQI0 150 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 TAS2R8Q9NYW2 309 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 HIGD1AQ9Y241 93 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 DNAJC15Q9Y5T4 150 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 HLA-DRB4X5D2U9 266 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 CPDO75976 1380 aa0.28□□□□□ -2.36
LINC00648-201ENST00000553747 OVOS2A0A0J9YW53 1432 aa0.28□□□□□ -2.37
LINC00648-201ENST00000553747 OVOS2Q6IE36 1432 aa0.28□□□□□ -2.37
LINC00648-201ENST00000553747 PTPRMP28827 1452 aa0.28□□□□□ -2.37
LINC00648-201ENST00000553747 CACNA1EQ15878 2313 aa0.27□□□□□ -2.37
LINC00648-201ENST00000553747 LOC285556D6RIA3 1793 aa0.27□□□□□ -2.37
LINC00648-201ENST00000553747 AFDNP55196 1824 aaKnown RBP0.27□□□□□ -2.37
LINC00648-201ENST00000553747 MEGF8Q7Z7M0 2845 aa0.27□□□□□ -2.37
LINC00648-201ENST00000553747 A0A096LNT2 108 aa0.27□□□□□ -2.37
LINC00648-201ENST00000553747 CXorf51AA0A1B0GTR3 108 aa0.27□□□□□ -2.37
LINC00648-201ENST00000553747 FXYD1O00168 92 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms