RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 HLA-DRB4X5D2U9 266 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 A0A0D9SG52 128 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 PGPA6NDG6 321 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 ZNF705GA8MUZ8 300 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-220ENST00000553491 K7EQD1 137 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 SLC17A3O00476 420 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 SOCS3O14543 225 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 NXPH4O95158 308 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 PRM2P04554 102 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 HTN3P15516 51 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 ATP6V0CP27449 155 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 RNASE4P34096 147 aaKnown RBP3.36□□□□□ -1.87
ATXN3-220ENST00000553491 CSN1S1P47710 185 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 TAS2R45P59539 299 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 UBE2L3P68036 154 aaKnown RBP3.36□□□□□ -1.87
ATXN3-220ENST00000553491 ZNF266Q14584 549 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 GUK1Q16774 197 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 KHDC3LQ587J8 217 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 TMEM41BQ5BJD5 291 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 AKR1C8PQ5T2L2 129 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 CASC10Q5T4H9 136 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 RPL7L1Q6DKI1 246 aaKnown RBP3.36□□□□□ -1.87
ATXN3-220ENST00000553491 OR8A1Q8NGG7 326 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 CMTM2Q8TAZ6 248 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 PHYHIPLQ96FC7 376 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 MRPL32Q9BYC8 188 aaKnown RBP3.36□□□□□ -1.87
ATXN3-220ENST00000553491 PARD6GQ9BYG4 376 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-220ENST00000553491 ACTR3CQ9C0K3 210 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-220ENST00000553491 SH3BGRL3Q9H299 93 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 ZNF331Q9NQX6 463 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-220ENST00000553491 TP53TG1Q9Y2A0 90 aa3.36□□□□□ -1.87
ATXN3-220ENST00000553491 IGLV7-46A0A075B6I9 117 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 TRBV19A0A075B6N1 114 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 TRAV12-3A0A0B4J271 114 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 A0A1B0GV50 99 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 LOC105371267A0A1B0GV96 52 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 KANTRA0A1W2PQU2 76 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 M0R3E3 92 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 TAAR5O14804 337 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 MRPS12O15235 138 aaKnown RBP3.35□□□□□ -1.87
ATXN3-220ENST00000553491 INSP01308 110 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 HBE1P02100 147 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 MBP02144 154 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 SLC25A5P05141 298 aaKnown RBP3.35□□□□□ -1.87
ATXN3-220ENST00000553491 GPX1P07203 203 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 GIG44P09565 113 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-220ENST00000553491 RBMY1A1P0DJD3 496 aaKnown RBP3.35□□□□□ -1.87
ATXN3-220ENST00000553491 RBMY1CP0DJD4 496 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 IGLC2P0DOY2 106 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 MIFP14174 115 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 TSPOP30536 169 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 LEPP41159 167 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 CDC34P49427 236 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-220ENST00000553491 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 ZNF345Q14585 488 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 RBMY1FQ15415 496 aaKnown RBP3.35□□□□□ -1.87
ATXN3-220ENST00000553491 RRN3P1Q2M238 152 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 FAM74A1Q5RGS3 127 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 TMEM78Q5T7P6 136 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 UQCC3Q6UW78 93 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 COMMD7Q86VX2 200 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 BAP18Q8IXM2 172 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 RPP25LQ8N5L8 163 aaKnown RBP3.35□□□□□ -1.87
ATXN3-220ENST00000553491 GNPNAT1Q96EK6 184 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-220ENST00000553491 MRPL53Q96EL3 112 aaKnown RBP3.35□□□□□ -1.87
ATXN3-220ENST00000553491 AQP10Q96PS8 301 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 ZNF471Q9BX82 626 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-220ENST00000553491 EDA2RQ9HAV5 297 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 TMEM14CQ9P0S9 112 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 TNFSF18Q9UNG2 199 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 PRELID1Q9Y255 219 aa3.35□□□□□ -1.87
ATXN3-220ENST00000553491 KLK5Q9Y337 293 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-220ENST00000553491 IGKV2-40A0A087WW87 121 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-220ENST00000553491 SMIM9A6NGZ8 99 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 IGLL5B9A064 214 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 TEX46H3BTG2 121 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 IGKV2D-40P01614 121 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-220ENST00000553491 ARL14EPLP0DKL9 152 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 CT45A10P0DMU9 189 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 DEFB130BP0DP73 79 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 DEFB130AP0DP74 79 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 CXCL2P19875 107 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 CDKN1BP46527 198 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 FHITP49789 147 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 FGF8P55075 233 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-220ENST00000553491 UBE2G2P60604 165 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 HERV-K104P63124 156 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 SERF2P84101 59 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 TMUB2Q71RG4 321 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 C1orf158Q8N1D5 194 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 CSNK1G2-AS1Q8NCQ2 148 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 FXYD5Q96DB9 178 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 FAM167A-AS1Q96KT0 104 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 IGF2BP2-AS1Q96M15 143 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 LINC00477Q96M19 166 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 OPRPNQ99935 248 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-220ENST00000553491 VGLL1Q99990 258 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 NIPSNAP3BQ9BS92 247 aa3.34□□□□□ -1.87
ATXN3-220ENST00000553491 AGPAT4-IT1Q9H0P7 198 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms