RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 ATRAIDQ6UW56 229 aa7.86□□□□□ -1.15
SUPT16H-202ENST00000552829 SMIM7Q9BQ49 75 aa7.86□□□□□ -1.15
SUPT16H-202ENST00000552829 DERL1Q9BUN8 251 aa7.86□□□□□ -1.15
SUPT16H-202ENST00000552829 SAV1Q9H4B6 383 aaPredicted RBP7.86□□□□□ -1.15
SUPT16H-202ENST00000552829 NRN1Q9NPD7 142 aa7.86□□□□□ -1.15
SUPT16H-202ENST00000552829 GOLT1BQ9Y3E0 138 aa7.86□□□□□ -1.15
SUPT16H-202ENST00000552829 ARL2-SNX15V9GYD0 113 aa7.86□□□□□ -1.15
SUPT16H-202ENST00000552829 LYRM9A8MSI8 78 aa7.85□□□□□ -1.15
SUPT16H-202ENST00000552829 KRTAP29-1A8MX34 341 aaPredicted RBP7.85□□□□□ -1.15
SUPT16H-202ENST00000552829 TMEM250H0YL14 139 aa7.85□□□□□ -1.15
SUPT16H-202ENST00000552829 M0R036 132 aa7.85□□□□□ -1.15
SUPT16H-202ENST00000552829 PDE6DO43924 150 aa7.85□□□□□ -1.15
SUPT16H-202ENST00000552829 NDUFB4O95168 129 aa7.85□□□□□ -1.15
SUPT16H-202ENST00000552829 IGKV3-20P01619 116 aa7.85□□□□□ -1.15
SUPT16H-202ENST00000552829 IGLC2P0DOY2 106 aa7.85□□□□□ -1.15
SUPT16H-202ENST00000552829 RPL7P18124 248 aaKnown RBP7.85□□□□□ -1.15
SUPT16H-202ENST00000552829 AKR1C3P42330 323 aa7.85□□□□□ -1.15
SUPT16H-202ENST00000552829 EXOC3-AS1Q8N2X6 119 aa7.85□□□□□ -1.15
SUPT16H-202ENST00000552829 TXNDC17Q9BRA2 123 aa7.85□□□□□ -1.15
SUPT16H-202ENST00000552829 UPK3BQ9BT76 320 aa7.85□□□□□ -1.15
SUPT16H-202ENST00000552829 DNAH8Q96JB1 4490 aa7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 TRBV19A0A075B6N1 114 aa7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 A8MTW9 85 aa7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 F5H768 121 aa7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 PEX7O00628 323 aa7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 BUB3O43684 328 aa7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 GALR1P47211 349 aa7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 SERTAD4-AS1Q5TG53 156 aa7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 IGFL4Q6B9Z1 124 aa7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 FOXI2Q6ZQN5 318 aa7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 CCDC28AQ8IWP9 274 aa7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 SVBPQ8N300 66 aa7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 NKX6-2Q9C056 277 aaPredicted RBP7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 OTORQ9NRC9 128 aa7.84□□□□□ -1.15
SUPT16H-202ENST00000552829 PLAC8L1A1L4L8 177 aa7.83□□□□□ -1.16
SUPT16H-202ENST00000552829 PGPEP1LA6NFU8 196 aa7.83□□□□□ -1.16
SUPT16H-202ENST00000552829 PRM2P04554 102 aa7.83□□□□□ -1.16
SUPT16H-202ENST00000552829 PSG9Q00887 426 aa7.83□□□□□ -1.16
SUPT16H-202ENST00000552829 ADIRFQ15847 76 aa7.83□□□□□ -1.16
SUPT16H-202ENST00000552829 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.83□□□□□ -1.16
SUPT16H-202ENST00000552829 SIGLEC15Q6ZMC9 328 aa7.83□□□□□ -1.16
SUPT16H-202ENST00000552829 Q6ZSN1 163 aa7.83□□□□□ -1.16
SUPT16H-202ENST00000552829 C11orf52Q96A22 123 aa7.83□□□□□ -1.16
SUPT16H-202ENST00000552829 TVP23CQ96ET8 276 aa7.83□□□□□ -1.16
SUPT16H-202ENST00000552829 NAT8Q9UHE5 227 aa7.83□□□□□ -1.16
SUPT16H-202ENST00000552829 RNF24Q9Y225 148 aa7.83□□□□□ -1.16
SUPT16H-202ENST00000552829 LRP1Q07954 4544 aaKnown RBP7.82□□□□□ -1.16
SUPT16H-202ENST00000552829 A0A087X0K7 114 aa7.82□□□□□ -1.16
SUPT16H-202ENST00000552829 TRAV34A0A0B4J273 112 aa7.82□□□□□ -1.16
SUPT16H-202ENST00000552829 NDUFS6O75380 124 aaKnown RBP7.82□□□□□ -1.16
SUPT16H-202ENST00000552829 SNAPINO95295 136 aa7.82□□□□□ -1.16
SUPT16H-202ENST00000552829 ATP5G1P05496 136 aa7.82□□□□□ -1.16
SUPT16H-202ENST00000552829 RPL35P42766 123 aaKnown RBP7.82□□□□□ -1.16
SUPT16H-202ENST00000552829 LINC00315P59091 139 aa7.82□□□□□ -1.16
SUPT16H-202ENST00000552829 C5orf17Q8NAS9 161 aa7.82□□□□□ -1.16
SUPT16H-202ENST00000552829 CMTM2Q8TAZ6 248 aa7.82□□□□□ -1.16
SUPT16H-202ENST00000552829 SGK494Q96LW2 274 aa7.82□□□□□ -1.16
SUPT16H-202ENST00000552829 GPR82Q96P67 336 aa7.82□□□□□ -1.16
SUPT16H-202ENST00000552829 CBY3A6NI87 242 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 M0R3E3 92 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 SOCS3O14543 225 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 DEFB130BP0DP73 79 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 DEFB130AP0DP74 79 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 TSPOP30536 169 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 CNN1P51911 297 aaKnown RBP7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 RPL23P62829 140 aaKnown RBP7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 ESRGQ1W209 222 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 FAM74A3Q4VXF1 159 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 CENPWQ5EE01 88 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 C1orf194Q5T5A4 169 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 AMTNQ6UX39 209 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 GOLT1AQ6ZVE7 132 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 OR4B1Q8NGF8 309 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 IGF2BP2-AS1Q96M15 143 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 LINC00479Q96M42 142 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 AAMDCQ9H7C9 122 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 SDF2L1Q9HCN8 221 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 RPS10P5Q9NQ39 176 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 EPDR1Q9UM22 224 aa7.81□□□□□ -1.16
SUPT16H-202ENST00000552829 A0A0J9YX75 114 aa7.8□□□□□ -1.16
SUPT16H-202ENST00000552829 ZNF705GA8MUZ8 300 aaPredicted RBP7.8□□□□□ -1.16
SUPT16H-202ENST00000552829 PDE6HQ13956 83 aa7.8□□□□□ -1.16
SUPT16H-202ENST00000552829 TMEM241Q24JQ0 296 aa7.8□□□□□ -1.16
SUPT16H-202ENST00000552829 RNF182Q8N6D2 247 aa7.8□□□□□ -1.16
SUPT16H-202ENST00000552829 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.8□□□□□ -1.16
SUPT16H-202ENST00000552829 NHLRC2Q8NBF2 726 aa7.8□□□□□ -1.16
SUPT16H-202ENST00000552829 MRPS16Q9Y3D3 137 aaKnown RBP7.8□□□□□ -1.16
SUPT16H-202ENST00000552829 FAT3Q8TDW7 4589 aa7.79□□□□□ -1.16
SUPT16H-202ENST00000552829 TRBV20OR9-2A0A075B6H5 130 aa7.79□□□□□ -1.16
SUPT16H-202ENST00000552829 IGKV2-40A0A087WW87 121 aaPredicted RBP7.79□□□□□ -1.16
SUPT16H-202ENST00000552829 TRAV8-2A0A0B4J237 113 aa7.79□□□□□ -1.16
SUPT16H-202ENST00000552829 C7orf77A4D0Y5 90 aa7.79□□□□□ -1.16
SUPT16H-202ENST00000552829 ISLRO14498 428 aa7.79□□□□□ -1.16
SUPT16H-202ENST00000552829 IGKV2D-40P01614 121 aaPredicted RBP7.79□□□□□ -1.16
SUPT16H-202ENST00000552829 TCRAP04437 139 aa7.79□□□□□ -1.16
SUPT16H-202ENST00000552829 UBE2G1P62253 170 aa7.79□□□□□ -1.16
SUPT16H-202ENST00000552829 BTN1A1Q13410 526 aa7.79□□□□□ -1.16
SUPT16H-202ENST00000552829 CBLN2Q8IUK8 224 aa7.79□□□□□ -1.16
SUPT16H-202ENST00000552829 HIST1H2BAQ96A08 127 aa7.79□□□□□ -1.16
SUPT16H-202ENST00000552829 SLC50A1Q9BRV3 221 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms