RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PRB4P10163 310 aaPredicted RBP1.46□□□□□ -2.18
CPSF6-207ENST00000551516 M6PRP20645 277 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 GPX4P36969 197 aaPredicted RBP1.46□□□□□ -2.18
CPSF6-207ENST00000551516 TALDO1P37837 337 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 ATP5G3P48201 142 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 CCR6P51684 374 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 CRYBA4P53673 196 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 EMP1P54849 157 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 PIGPP57054 158 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 GNG2P59768 71 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 KRTAP10-5P60370 271 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 KRTAP10-7P60409 375 aaPredicted RBP1.46□□□□□ -2.18
CPSF6-207ENST00000551516 GABARAPL2P60520 117 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 HERVK_113P61574 105 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 DAD1P61803 113 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 ERHP84090 104 aaKnown RBP1.46□□□□□ -2.18
CPSF6-207ENST00000551516 MXD1Q05195 221 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 LCE1EQ5T753 118 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 SCXQ7RTU7 201 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 LYZL2Q7Z4W2 148 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 LINC01551Q86U37 167 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 WFDC10BQ8IUB3 73 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 PCP2Q8IVA1 136 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 RNF182Q8N6D2 247 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 OR8A1Q8NGG7 326 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 OR10G4Q8NGN3 311 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 TERB2Q8NHR7 220 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 CIRBP-AS1Q8TBR5 109 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 Q8WTZ3 238 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 TMEM263Q8WUH6 116 aaKnown RBP1.46□□□□□ -2.18
CPSF6-207ENST00000551516 DNAJC30Q96LL9 226 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 ODF3Q96PU9 254 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 SHANK2-AS3Q9BTD1 123 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 HINT2Q9BX68 163 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 PARD6GQ9BYG4 376 aaPredicted RBP1.46□□□□□ -2.18
CPSF6-207ENST00000551516 SLC25A39Q9BZJ4 359 aaPredicted RBP1.46□□□□□ -2.18
CPSF6-207ENST00000551516 NAA50Q9GZZ1 169 aaKnown RBP1.46□□□□□ -2.18
CPSF6-207ENST00000551516 NOP10Q9NPE3 64 aaKnown RBP1.46□□□□□ -2.18
CPSF6-207ENST00000551516 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.46□□□□□ -2.18
CPSF6-207ENST00000551516 TPRKBQ9Y3C4 175 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 RBM7Q9Y580 266 aaKnown RBP1.46□□□□□ -2.18
CPSF6-207ENST00000551516 TIMM8BQ9Y5J9 83 aaPredicted RBP1.46□□□□□ -2.18
CPSF6-207ENST00000551516 A0A0J9YY99 117 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 IBA57-AS1B1ANH7 110 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 F5H768 121 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 SMKR1H3BMG3 65 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 TEX46H3BTG2 121 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 BOLA2-SMG1P6H3BVE0 249 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 K7EP13 123 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 CCNKO75909 580 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 SNAPC5O75971 98 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 GABARAPO95166 117 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 APOA1P02647 267 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 SLC25A6P12236 298 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 PRSS3P35030 304 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 OPRK1P41145 380 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 RANBP1P43487 201 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 CCL18P55774 89 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 TCL1AP56279 114 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 TAS2R46P59540 309 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 SNRPD3P62318 126 aaKnown RBP1.45□□□□□ -2.18
CPSF6-207ENST00000551516 SURF2Q15527 256 aaPredicted RBP1.45□□□□□ -2.18
CPSF6-207ENST00000551516 PSG3Q16557 428 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 LINC01556Q5JQF7 62 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 IDNKQ5T6J7 187 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 LELP1Q5T871 98 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 TMEM14EPQ6UXP3 125 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 DPPA3Q6W0C5 159 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 TMEM144Q7Z5S9 345 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 C10orf67Q8IYJ2 551 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 TMEM256Q8N2U0 113 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 SLC35G3Q8N808 338 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 Q8N814 137 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 TMEM229BQ8NBD8 167 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 OR10J6PQ8NGY7 276 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 MARCH1Q8TCQ1 289 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 DEFB104AQ8WTQ1 72 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 RBPMSQ93062 196 aaKnown RBP1.45□□□□□ -2.18
CPSF6-207ENST00000551516 TVP23CQ96ET8 276 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 FAM167A-AS1Q96KT0 104 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 C20orf144Q9BQM9 153 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 RSG1Q9BU20 258 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 SLC25A2Q9BXI2 301 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 ACTR3CQ9C0K3 210 aaPredicted RBP1.45□□□□□ -2.18
CPSF6-207ENST00000551516 AGPAT4-IT1Q9H0P7 198 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 SCN3BQ9NY72 215 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 RAB26Q9ULW5 256 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 KLF12Q9Y4X4 402 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 U3KQ87 197 aa1.45□□□□□ -2.18
CPSF6-207ENST00000551516 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.44□□□□□ -2.18
CPSF6-207ENST00000551516 ANKRD20A5PA0PJZ0 165 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 SNRPGP15A8MWD9 76 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 FNDC10F2Z333 226 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 H7BYZ3 331 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 SIVA1O15304 175 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 CYB5BO43169 146 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 GSTZ1O43708 216 aaPredicted RBP1.44□□□□□ -2.18
CPSF6-207ENST00000551516 HTN3P15516 51 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 MYL9P24844 172 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 RCVRNP35243 200 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms