RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, human

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE1B-206	ENST00000550285	C11orf21	Q9P2W6	132 aa		10.82	□□□□□ -0.68
PDE1B-206	ENST00000550285	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.82	□□□□□ -0.68
PDE1B-206	ENST00000550285		A0A0J9YX75	114 aa		10.82	□□□□□ -0.68
PDE1B-206	ENST00000550285	KNCN	A6PVL3	124 aa		10.82	□□□□□ -0.68
PDE1B-206	ENST00000550285	HIGD1C	A8MV81	97 aa		10.82	□□□□□ -0.68
PDE1B-206	ENST00000550285	LINC00482	Q8N8I6	264 aa		10.82	□□□□□ -0.68
PDE1B-206	ENST00000550285	FAM19A4	Q96LR4	140 aa		10.82	□□□□□ -0.68
PDE1B-206	ENST00000550285	SIGLEC8	Q9NYZ4	499 aa		10.82	□□□□□ -0.68
PDE1B-206	ENST00000550285	PDZD11	Q5EBL8	140 aa		10.81	□□□□□ -0.68
PDE1B-206	ENST00000550285	PRR31	Q5SQ13	230 aa		10.81	□□□□□ -0.68
PDE1B-206	ENST00000550285	MRPL54	Q6P161	138 aa	Known RBP	10.81	□□□□□ -0.68
PDE1B-206	ENST00000550285	APRG1	Q8IVJ8	170 aa		10.81	□□□□□ -0.68
PDE1B-206	ENST00000550285	XKRY2	A2RUG3	117 aa		10.8	□□□□□ -0.68
PDE1B-206	ENST00000550285	FABP5P3	A8MUU1	101 aa		10.8	□□□□□ -0.68
PDE1B-206	ENST00000550285		A8MWL6	223 aa		10.8	□□□□□ -0.68
PDE1B-206	ENST00000550285	OR4B1	Q8NGF8	309 aa		10.8	□□□□□ -0.68
PDE1B-206	ENST00000550285	PGLYRP4	Q96LB8	373 aa		10.8	□□□□□ -0.68
PDE1B-206	ENST00000550285	MAP6D1	Q9H9H5	199 aa		10.8	□□□□□ -0.68
PDE1B-206	ENST00000550285	TMEM189	A5PLL7	270 aa		10.8	□□□□□ -0.68
PDE1B-206	ENST00000550285	CT83	Q5H943	113 aa		10.8	□□□□□ -0.68
PDE1B-206	ENST00000550285	SPAG8	Q99932	426 aa	Predicted RBP	10.8	□□□□□ -0.68
PDE1B-206	ENST00000550285	TRAPPC1	Q9Y5R8	145 aa		10.8	□□□□□ -0.68
PDE1B-206	ENST00000550285	IGLV1-51	P01701	117 aa		10.79	□□□□□ -0.68
PDE1B-206	ENST00000550285	ORM1	P02763	201 aa		10.79	□□□□□ -0.68
PDE1B-206	ENST00000550285	RNASE4	P34096	147 aa	Known RBP	10.79	□□□□□ -0.68
PDE1B-206	ENST00000550285	SVIP	Q8NHG7	77 aa		10.79	□□□□□ -0.68
PDE1B-206	ENST00000550285	NAT8B	Q9UHF3	227 aa		10.79	□□□□□ -0.68
PDE1B-206	ENST00000550285	TRAV2	A0A0B4J234	112 aa		10.78	□□□□□ -0.68
PDE1B-206	ENST00000550285	IGKV3D-20	A0A0C4DH25	116 aa		10.78	□□□□□ -0.68
PDE1B-206	ENST00000550285	GRIFIN	A4D1Z8	144 aa		10.78	□□□□□ -0.68
PDE1B-206	ENST00000550285	NPS	P0C0P6	89 aa		10.78	□□□□□ -0.68
PDE1B-206	ENST00000550285	EBLN2	Q6P2I7	272 aa		10.78	□□□□□ -0.68
PDE1B-206	ENST00000550285	LENEP	Q9Y5L5	61 aa		10.78	□□□□□ -0.68
PDE1B-206	ENST00000550285		M0R2Z0	102 aa		10.78	□□□□□ -0.68
PDE1B-206	ENST00000550285	GPX1	P07203	203 aa		10.78	□□□□□ -0.68
PDE1B-206	ENST00000550285	ODF3L2	Q3SX64	289 aa		10.78	□□□□□ -0.68
PDE1B-206	ENST00000550285	FOXI2	Q6ZQN5	318 aa		10.78	□□□□□ -0.68
PDE1B-206	ENST00000550285	TPPP3	Q9BW30	176 aa		10.78	□□□□□ -0.68
PDE1B-206	ENST00000550285	TRAV12-2	A0A075B6T6	113 aa		10.77	□□□□□ -0.68
PDE1B-206	ENST00000550285	TRAV25	A0A0B4J276	109 aa		10.77	□□□□□ -0.68
PDE1B-206	ENST00000550285	MUC21	A0A0G2JKD1	596 aa		10.77	□□□□□ -0.68
PDE1B-206	ENST00000550285	MUC21	A0A140T8X8	626 aa		10.77	□□□□□ -0.68
PDE1B-206	ENST00000550285	OR4C46	A6NHA9	309 aa		10.77	□□□□□ -0.68
PDE1B-206	ENST00000550285	MUC21	Q5SSG8	566 aa		10.77	□□□□□ -0.68
PDE1B-206	ENST00000550285	NOTCH3	Q9UM47	2321 aa		10.77	□□□□□ -0.69
PDE1B-206	ENST00000550285	CRISP2	P16562	243 aa		10.77	□□□□□ -0.69
PDE1B-206	ENST00000550285	FXYD7	P58549	80 aa		10.77	□□□□□ -0.69
PDE1B-206	ENST00000550285	RBMY1B	A6NDE4	496 aa	Known RBP	10.76	□□□□□ -0.69
PDE1B-206	ENST00000550285	RBMY1E	A6NEQ0	496 aa	Known RBP	10.76	□□□□□ -0.69
PDE1B-206	ENST00000550285	AMBP	P02760	352 aa		10.76	□□□□□ -0.69
PDE1B-206	ENST00000550285	RBMY1D	P0C7P1	496 aa	Known RBP	10.76	□□□□□ -0.69
PDE1B-206	ENST00000550285	SPINK13	Q1W4C9	94 aa		10.76	□□□□□ -0.69
PDE1B-206	ENST00000550285	AMTN	Q6UX39	209 aa		10.76	□□□□□ -0.69
PDE1B-206	ENST00000550285	GFRA4	Q9GZZ7	299 aa		10.76	□□□□□ -0.69
PDE1B-206	ENST00000550285	NAGK	Q9UJ70	344 aa		10.76	□□□□□ -0.69
PDE1B-206	ENST00000550285	KLLN	B2CW77	178 aa		10.76	□□□□□ -0.69
PDE1B-206	ENST00000550285	CAMP	P49913	170 aa		10.76	□□□□□ -0.69
PDE1B-206	ENST00000550285	STAB1	Q9NY15	2570 aa		10.75	□□□□□ -0.69
PDE1B-206	ENST00000550285		H3BMM0	161 aa		10.75	□□□□□ -0.69
PDE1B-206	ENST00000550285	CD7	P09564	240 aa		10.75	□□□□□ -0.69
PDE1B-206	ENST00000550285	ARMS2	P0C7Q2	107 aa		10.75	□□□□□ -0.69
PDE1B-206	ENST00000550285	LINC01559	Q495D7	138 aa		10.75	□□□□□ -0.69
PDE1B-206	ENST00000550285	TRAV12-3	A0A0B4J271	114 aa		10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	SNURFL	B1AK76	121 aa		10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	HLA-DRB4	P13762	266 aa		10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	FOXA3	P55318	350 aa	Predicted RBP	10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	IQCJ	Q1A5X6	159 aa		10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	LYZL1	Q6UWQ5	148 aa		10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	WFDC10A	Q9H1F0	79 aa		10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	HLA-DRB4	X5D2U9	266 aa		10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	KIR2DL5B	A0A0G2JN68	375 aa		10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	KIR2DL5B	A0A0G2JPC4	375 aa		10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	FAM231B	A6NCW3	169 aa		10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	TMEM136	Q6ZRR5	245 aa		10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	KIR2DL5A	Q8N109	375 aa		10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	GNB1L	Q9BYB4	327 aa		10.74	□□□□□ -0.69
PDE1B-206	ENST00000550285	TRBV7-9	A0A0J9YWB2	115 aa		10.73	□□□□□ -0.69
PDE1B-206	ENST00000550285		A0A1B0GXF2	115 aa		10.73	□□□□□ -0.69
PDE1B-206	ENST00000550285	DUSP14	O95147	198 aa	Known RBP	10.73	□□□□□ -0.69
PDE1B-206	ENST00000550285	RBX1	P62877	108 aa		10.73	□□□□□ -0.69
PDE1B-206	ENST00000550285	DMRTA1	Q5VZB9	504 aa		10.73	□□□□□ -0.69
PDE1B-206	ENST00000550285		Q6AWC8	147 aa		10.73	□□□□□ -0.69
PDE1B-206	ENST00000550285	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.73	□□□□□ -0.69
PDE1B-206	ENST00000550285	TRAV21	A0A0B4J279	112 aa		10.73	□□□□□ -0.69
PDE1B-206	ENST00000550285	SPRY2	O43597	315 aa		10.73	□□□□□ -0.69
PDE1B-206	ENST00000550285	ANXA2R	Q3ZCQ2	193 aa		10.73	□□□□□ -0.69
PDE1B-206	ENST00000550285	COX19	Q49B96	90 aa		10.73	□□□□□ -0.69
PDE1B-206	ENST00000550285	TMEM18	Q96B42	140 aa		10.73	□□□□□ -0.69
PDE1B-206	ENST00000550285	MRPL18	Q9H0U6	180 aa	Known RBP	10.73	□□□□□ -0.69
PDE1B-206	ENST00000550285	IGLC6	P0CF74	106 aa		10.72	□□□□□ -0.69
PDE1B-206	ENST00000550285	ODF3	Q96PU9	254 aa		10.72	□□□□□ -0.69
PDE1B-206	ENST00000550285	OR11H12	B2RN74	326 aa		10.72	□□□□□ -0.69
PDE1B-206	ENST00000550285	GNRH2	O43555	120 aa		10.72	□□□□□ -0.69
PDE1B-206	ENST00000550285	ZNF324	O75467	553 aa	Predicted RBP	10.72	□□□□□ -0.69
PDE1B-206	ENST00000550285	MT-ND6	P03923	174 aa		10.72	□□□□□ -0.69
PDE1B-206	ENST00000550285	LEP	P41159	167 aa		10.72	□□□□□ -0.69
PDE1B-206	ENST00000550285	CDKN1B	P46527	198 aa		10.72	□□□□□ -0.69
PDE1B-206	ENST00000550285	BEAN1	Q3B7T3	259 aa		10.72	□□□□□ -0.69
PDE1B-206	ENST00000550285	KIAA1644	Q3SXP7	199 aa		10.72	□□□□□ -0.69
PDE1B-206	ENST00000550285	FER1L6-AS1	Q8NA97	138 aa		10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms