RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 SLAQ13239 276 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 MRPL23Q16540 153 aaKnown RBP4.6□□□□□ -1.67
SCAF11-211ENST00000547950 FAM74A1Q5RGS3 127 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 LYPD5Q6UWN5 251 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 GOLT1AQ6ZVE7 132 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 OR10G4Q8NGN3 311 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 OR10G9Q8NGN4 311 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 OR10G7Q8NGN6 311 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 SGK494Q96LW2 274 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 TNFRSF18Q9Y5U5 241 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 TRGV11A0A075B6L2 103 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 TRAV8-1A0A0A6YYK1 113 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 LINC00315P59091 139 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 KRTAP10-2P60368 255 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 GNG5P63218 68 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 Q6AWC8 147 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 PQLC2Q6ZP29 291 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 NEGR1Q7Z3B1 354 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 HSD17B11Q8NBQ5 300 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 TVP23CQ96ET8 276 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 ZNF479Q96JC4 524 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 SPXQ9BT56 116 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 TREM1Q9NP99 234 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 LENEPQ9Y5L5 61 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 ALG5Q9Y673 324 aa4.59□□□□□ -1.67
SCAF11-211ENST00000547950 DNAH11Q96DT5 4516 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 TRAV9-2A0A087WT02 112 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 TRAV21A0A0B4J279 112 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 F6UZH7 168 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 K7EQD1 137 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 CDK2AP2O75956 126 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 ARL14EPLP0DKL9 152 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 GYPEP15421 78 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 SRIP30626 198 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 IQCF2Q8IXL9 164 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 MAPKAPK5-AS1Q8N8E1 139 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 OR4C5Q8NGB2 326 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 PCNPQ8WW12 178 aaKnown RBP4.58□□□□□ -1.68
SCAF11-211ENST00000547950 TMED6Q8WW62 240 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 RASL10AQ92737 203 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 MED28Q9H204 178 aa4.58□□□□□ -1.68
SCAF11-211ENST00000547950 IGHV3-16A0A0C4DH30 117 aa4.57□□□□□ -1.68
SCAF11-211ENST00000547950 C9JCJ5 164 aa4.57□□□□□ -1.68
SCAF11-211ENST00000547950 M0R2P5 195 aa4.57□□□□□ -1.68
SCAF11-211ENST00000547950 BTF3P20290 206 aaKnown RBP4.57□□□□□ -1.68
SCAF11-211ENST00000547950 FUSP35637 526 aaKnown RBP eCLIP4.57□□□□□ -1.68
SCAF11-211ENST00000547950 CDC34P49427 236 aaPredicted RBP4.57□□□□□ -1.68
SCAF11-211ENST00000547950 SUMO1P63165 101 aaKnown RBP4.57□□□□□ -1.68
SCAF11-211ENST00000547950 TDRG1Q3Y452 100 aa4.57□□□□□ -1.68
SCAF11-211ENST00000547950 Q5BKY6 102 aa4.57□□□□□ -1.68
SCAF11-211ENST00000547950 ASB13Q8WXK3 278 aa4.57□□□□□ -1.68
SCAF11-211ENST00000547950 RAB24Q969Q5 203 aa4.57□□□□□ -1.68
SCAF11-211ENST00000547950 SDF2L1Q9HCN8 221 aa4.57□□□□□ -1.68
SCAF11-211ENST00000547950 LY96Q9Y6Y9 160 aa4.57□□□□□ -1.68
SCAF11-211ENST00000547950 NACAE9PAV3 2078 aa4.57□□□□□ -1.68
SCAF11-211ENST00000547950 PKHD1P08F94 4074 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 TRAV4A0A0B4J268 109 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 LOC100131303A0A0U1RQF7 123 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 K7EQM0 130 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 ORM1P02763 201 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 TCRAP04437 139 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 TYMSP04818 313 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 STAG3L2P0CL84 134 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 STAG3L3P0CL85 134 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 EVI2AP22794 236 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 ATP6V0CP27449 155 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 GCHFRP30047 84 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 ZNF80P51504 273 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-211ENST00000547950 ZNF876PQ49A33 203 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-211ENST00000547950 PRNTQ86SH4 94 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 WFDC10BQ8IUB3 73 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 ARL6IP6Q8N6S5 226 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 NHLRC2Q8NBF2 726 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 KCNS1Q96KK3 526 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 NDFIP1Q9BT67 221 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 ACTR3CQ9C0K3 210 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-211ENST00000547950 SH3BGRL3Q9H299 93 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 SCRT2Q9NQ03 307 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 BATF3Q9NR55 127 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 EPDR1Q9UM22 224 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 PLA2G2DQ9UNK4 145 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 PSG8Q9UQ74 426 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 PCLOQ9Y6V0 5065 aa4.56□□□□□ -1.68
SCAF11-211ENST00000547950 DYNC1H1Q14204 4646 aaKnown RBP4.56□□□□□ -1.68
SCAF11-211ENST00000547950 IGHV3-73A0A0B4J1V6 119 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 TAAR5O14804 337 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 PTTG1O95997 202 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 CXorf1O96002 111 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 GCGP01275 180 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 IFNA7P01567 189 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 MBP02144 154 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 PPT1P50897 306 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 ERVFC1-1P60608 527 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 SERF2P84101 59 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 RPL7L1Q6DKI1 246 aaKnown RBP4.55□□□□□ -1.68
SCAF11-211ENST00000547950 NFE4Q86UQ8 179 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 TMEM75Q8N9X5 138 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 C5orf17Q8NAS9 161 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 INO80EQ8NBZ0 244 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms