RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 C8orf49Q96NF6 230 aa13.21□□□□□ -0.29
LETMD1-210ENST00000547555 SPANXB1Q9NS25 103 aaPredicted RBP13.21□□□□□ -0.29
LETMD1-210ENST00000547555 WNK2Q9Y3S1 2297 aa13.21□□□□□ -0.29
LETMD1-210ENST00000547555 PLXNB1O43157 2135 aa13.21□□□□□ -0.3
LETMD1-210ENST00000547555 LINC01549A6NIU2 74 aa13.21□□□□□ -0.3
LETMD1-210ENST00000547555 IGLL5B9A064 214 aa13.21□□□□□ -0.3
LETMD1-210ENST00000547555 GNG7O60262 68 aa13.21□□□□□ -0.3
LETMD1-210ENST00000547555 PRSS1P07477 247 aa13.21□□□□□ -0.3
LETMD1-210ENST00000547555 EGR2P11161 476 aaPredicted RBP13.21□□□□□ -0.3
LETMD1-210ENST00000547555 LY6G5BQ8NDX9 201 aa13.21□□□□□ -0.3
LETMD1-210ENST00000547555 ACANP16112 2415 aa13.2□□□□□ -0.3
LETMD1-210ENST00000547555 IGHV4-4A0A075B6R2 117 aa13.2□□□□□ -0.3
LETMD1-210ENST00000547555 IL17RELQ6ZVW7 336 aa13.2□□□□□ -0.3
LETMD1-210ENST00000547555 MRPL53Q96EL3 112 aaKnown RBP13.2□□□□□ -0.3
LETMD1-210ENST00000547555 ZNF479Q96JC4 524 aa13.2□□□□□ -0.3
LETMD1-210ENST00000547555 C17orf77Q96MU5 243 aa13.2□□□□□ -0.3
LETMD1-210ENST00000547555 IGLV11-55A0A075B6I3 123 aa13.19□□□□□ -0.3
LETMD1-210ENST00000547555 A0A087WX48 190 aa13.19□□□□□ -0.3
LETMD1-210ENST00000547555 CNIH1O95406 144 aa13.19□□□□□ -0.3
LETMD1-210ENST00000547555 KLK9Q2XQG4 91 aa13.19□□□□□ -0.3
LETMD1-210ENST00000547555 SVIPQ8NHG7 77 aa13.19□□□□□ -0.3
LETMD1-210ENST00000547555 FBXL15Q9H469 300 aa13.19□□□□□ -0.3
LETMD1-210ENST00000547555 KLK9Q9UKQ9 250 aa13.19□□□□□ -0.3
LETMD1-210ENST00000547555 IGLV2-18A0A075B6J9 118 aa13.18□□□□□ -0.3
LETMD1-210ENST00000547555 M0R3E3 92 aa13.18□□□□□ -0.3
LETMD1-210ENST00000547555 NBR2O15453 112 aa13.18□□□□□ -0.3
LETMD1-210ENST00000547555 AZU1P20160 251 aa13.18□□□□□ -0.3
LETMD1-210ENST00000547555 PRR31Q5SQ13 230 aa13.18□□□□□ -0.3
LETMD1-210ENST00000547555 LYRM7Q5U5X0 104 aa13.18□□□□□ -0.3
LETMD1-210ENST00000547555 ATP6V0BQ99437 205 aa13.18□□□□□ -0.3
LETMD1-210ENST00000547555 MAST4O15021 2626 aa13.18□□□□□ -0.3
LETMD1-210ENST00000547555 IGHV3-21A0A0B4J1V1 117 aa13.18□□□□□ -0.3
LETMD1-210ENST00000547555 NCBP2LA6PVI3 153 aaKnown RBP13.18□□□□□ -0.3
LETMD1-210ENST00000547555 CNTFRP26992 372 aa13.18□□□□□ -0.3
LETMD1-210ENST00000547555 LAGE3Q14657 143 aa13.18□□□□□ -0.3
LETMD1-210ENST00000547555 ZC2HC1BQ5TFG8 222 aa13.18□□□□□ -0.3
LETMD1-210ENST00000547555 SLC50A1Q9BRV3 221 aa13.18□□□□□ -0.3
LETMD1-210ENST00000547555 HIVEP1P15822 2718 aa13.17□□□□□ -0.3
LETMD1-210ENST00000547555 CSPG4Q6UVK1 2322 aa13.17□□□□□ -0.3
LETMD1-210ENST00000547555 GATA3P23771 443 aa13.17□□□□□ -0.3
LETMD1-210ENST00000547555 RRN3P1Q2M238 152 aa13.17□□□□□ -0.3
LETMD1-210ENST00000547555 C12orf74Q32Q52 190 aa13.17□□□□□ -0.3
LETMD1-210ENST00000547555 IGHV3-72A0A0B4J1Y9 119 aa13.16□□□□□ -0.3
LETMD1-210ENST00000547555 TMEM238LA0A1B0GVL6 79 aa13.16□□□□□ -0.3
LETMD1-210ENST00000547555 A6NJY4 79 aa13.16□□□□□ -0.3
LETMD1-210ENST00000547555 OOSP1A8MZH6 123 aa13.16□□□□□ -0.3
LETMD1-210ENST00000547555 TGFAP01135 160 aa13.16□□□□□ -0.3
LETMD1-210ENST00000547555 GAGE13Q4V321 117 aa13.16□□□□□ -0.3
LETMD1-210ENST00000547555 NHP2Q9NX24 153 aaKnown RBP13.16□□□□□ -0.3
LETMD1-210ENST00000547555 IGKV2D-26A0A0A0MRZ7 120 aa13.15□□□□□ -0.3
LETMD1-210ENST00000547555 OR11H6Q8NGC7 330 aa13.15□□□□□ -0.3
LETMD1-210ENST00000547555 TMEM158Q8WZ71 300 aa13.15□□□□□ -0.3
LETMD1-210ENST00000547555 MRAP2Q96G30 205 aa13.15□□□□□ -0.3
LETMD1-210ENST00000547555 C21orf62Q9NYP8 219 aa13.15□□□□□ -0.3
LETMD1-210ENST00000547555 F8P00451 2351 aa13.15□□□□□ -0.3
LETMD1-210ENST00000547555 H7C1H1 209 aa13.14□□□□□ -0.31
LETMD1-210ENST00000547555 ORMDL2Q53FV1 153 aa13.14□□□□□ -0.31
LETMD1-210ENST00000547555 DPM3Q9P2X0 92 aa13.14□□□□□ -0.31
LETMD1-210ENST00000547555 TRBV7-3A0A075B6L6 115 aa13.13□□□□□ -0.31
LETMD1-210ENST00000547555 F8VRH5 84 aa13.13□□□□□ -0.31
LETMD1-210ENST00000547555 J3QLI3 93 aa13.13□□□□□ -0.31
LETMD1-210ENST00000547555 M0R1W7 72 aa13.13□□□□□ -0.31
LETMD1-210ENST00000547555 ZNF575Q86XF7 245 aa13.13□□□□□ -0.31
LETMD1-210ENST00000547555 SMR3AQ99954 134 aa13.13□□□□□ -0.31
LETMD1-210ENST00000547555 SIRPDQ9H106 197 aa13.13□□□□□ -0.31
LETMD1-210ENST00000547555 LENEPQ9Y5L5 61 aa13.13□□□□□ -0.31
LETMD1-210ENST00000547555 TLN2Q9Y4G6 2542 aa13.13□□□□□ -0.31
LETMD1-210ENST00000547555 TMSB15BA0A087X1C1 80 aa13.12□□□□□ -0.31
LETMD1-210ENST00000547555 H3BMG7 143 aa13.12□□□□□ -0.31
LETMD1-210ENST00000547555 PPP1R17O96001 155 aa13.12□□□□□ -0.31
LETMD1-210ENST00000547555 ORM1P02763 201 aa13.12□□□□□ -0.31
LETMD1-210ENST00000547555 C5orf64Q2M2E5 130 aa13.12□□□□□ -0.31
LETMD1-210ENST00000547555 C1orf122Q6ZSJ8 110 aa13.12□□□□□ -0.31
LETMD1-210ENST00000547555 Q71RC1 249 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-210ENST00000547555 FANCD2OSQ96PS1 177 aa13.12□□□□□ -0.31
LETMD1-210ENST00000547555 PRO0461Q9UI25 63 aa13.12□□□□□ -0.31
LETMD1-210ENST00000547555 TSSC4Q9Y5U2 329 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-210ENST00000547555 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-210ENST00000547555 LY6G6DO95868 133 aa13.12□□□□□ -0.31
LETMD1-210ENST00000547555 CCDC144NLQ6NUI1 221 aa13.12□□□□□ -0.31
LETMD1-210ENST00000547555 C20orf78Q9BR46 151 aa13.12□□□□□ -0.31
LETMD1-210ENST00000547555 NAA38Q9BRA0 125 aaKnown RBP13.12□□□□□ -0.31
LETMD1-210ENST00000547555 ONECUT1Q9UBC0 465 aa13.12□□□□□ -0.31
LETMD1-210ENST00000547555 CFHR4Q92496 578 aa13.11□□□□□ -0.31
LETMD1-210ENST00000547555 C18orf15Q96N68 181 aa13.11□□□□□ -0.31
LETMD1-210ENST00000547555 IGKV2-40A0A087WW87 121 aaPredicted RBP13.1□□□□□ -0.31
LETMD1-210ENST00000547555 CENPVL3A0A0U1RRI6 287 aa13.1□□□□□ -0.31
LETMD1-210ENST00000547555 OR11H12B2RN74 326 aa13.1□□□□□ -0.31
LETMD1-210ENST00000547555 SMKR1H3BMG3 65 aa13.1□□□□□ -0.31
LETMD1-210ENST00000547555 IGKV2D-40P01614 121 aaPredicted RBP13.1□□□□□ -0.31
LETMD1-210ENST00000547555 ZNF80P51504 273 aaPredicted RBP13.1□□□□□ -0.31
LETMD1-210ENST00000547555 PAPPA-AS1Q5QFB9 102 aa13.1□□□□□ -0.31
LETMD1-210ENST00000547555 GTSCR1Q86UQ5 136 aa13.1□□□□□ -0.31
LETMD1-210ENST00000547555 OR11H1Q8NG94 326 aa13.1□□□□□ -0.31
LETMD1-210ENST00000547555 OR11H2Q8NH07 326 aa13.1□□□□□ -0.31
LETMD1-210ENST00000547555 HIST1H4GQ99525 98 aa13.1□□□□□ -0.31
LETMD1-210ENST00000547555 SPAG8Q99932 426 aaPredicted RBP13.1□□□□□ -0.31
LETMD1-210ENST00000547555 MYMXA0A1B0GTQ4 84 aa13.09□□□□□ -0.31
LETMD1-210ENST00000547555 F8W735 103 aaPredicted RBP13.09□□□□□ -0.31
LETMD1-210ENST00000547555 AVPP01185 164 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms