RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 SDF2L1Q9HCN8 221 aa16.6■□□□□ 0.25
SMARCD1-203ENST00000547247 TIMM8BQ9Y5J9 83 aaPredicted RBP16.6■□□□□ 0.25
SMARCD1-203ENST00000547247 TRGV11A0A075B6L2 103 aa16.59■□□□□ 0.25
SMARCD1-203ENST00000547247 CXorf65A6NEN9 183 aa16.59■□□□□ 0.25
SMARCD1-203ENST00000547247 SPART-AS1P0CW21 52 aa16.59■□□□□ 0.25
SMARCD1-203ENST00000547247 IBA57Q5T440 356 aaKnown RBP16.59■□□□□ 0.25
SMARCD1-203ENST00000547247 DKK2Q9UBU2 259 aa16.59■□□□□ 0.25
SMARCD1-203ENST00000547247 CELA1Q9UNI1 258 aa16.59■□□□□ 0.25
SMARCD1-203ENST00000547247 TEX48A0A1B0GUV7 120 aa16.58■□□□□ 0.24
SMARCD1-203ENST00000547247 MGST1P10620 155 aaKnown RBP16.58■□□□□ 0.24
SMARCD1-203ENST00000547247 FAM222AQ5U5X8 452 aa16.58■□□□□ 0.24
SMARCD1-203ENST00000547247 PRR27Q6MZM9 219 aa16.58■□□□□ 0.24
SMARCD1-203ENST00000547247 C11orf72Q8NBR9 251 aa16.58■□□□□ 0.24
SMARCD1-203ENST00000547247 GSN-AS1Q9NRJ2 163 aa16.58■□□□□ 0.24
SMARCD1-203ENST00000547247 PGPEP1LA6NFU8 196 aa16.57■□□□□ 0.24
SMARCD1-203ENST00000547247 C9JQL5 133 aa16.57■□□□□ 0.24
SMARCD1-203ENST00000547247 GNRH2O43555 120 aa16.57■□□□□ 0.24
SMARCD1-203ENST00000547247 ORM1P02763 201 aa16.57■□□□□ 0.24
SMARCD1-203ENST00000547247 SMIM7Q9BQ49 75 aa16.57■□□□□ 0.24
SMARCD1-203ENST00000547247 NOP10Q9NPE3 64 aaKnown RBP16.57■□□□□ 0.24
SMARCD1-203ENST00000547247 LYRM9A8MSI8 78 aa16.56■□□□□ 0.24
SMARCD1-203ENST00000547247 TYMSP04818 313 aa16.56■□□□□ 0.24
SMARCD1-203ENST00000547247 ZNF415Q09FC8 603 aa16.56■□□□□ 0.24
SMARCD1-203ENST00000547247 IGKV3D-20A0A0C4DH25 116 aa16.55■□□□□ 0.24
SMARCD1-203ENST00000547247 TCL1AP56279 114 aa16.55■□□□□ 0.24
SMARCD1-203ENST00000547247 BIN3Q9NQY0 253 aa16.55■□□□□ 0.24
SMARCD1-203ENST00000547247 MDFICQ9P1T7 246 aa16.55■□□□□ 0.24
SMARCD1-203ENST00000547247 ZNF727A8MUV8 499 aa16.55■□□□□ 0.24
SMARCD1-203ENST00000547247 DAZ2Q13117 558 aaKnown RBP16.55■□□□□ 0.24
SMARCD1-203ENST00000547247 OCC1Q8TAD7 63 aa16.55■□□□□ 0.24
SMARCD1-203ENST00000547247 IGHV3-16A0A0C4DH30 117 aa16.54■□□□□ 0.24
SMARCD1-203ENST00000547247 B4DEV8 164 aa16.54■□□□□ 0.24
SMARCD1-203ENST00000547247 M0R036 132 aa16.54■□□□□ 0.24
SMARCD1-203ENST00000547247 NANOS2P60321 138 aaKnown RBP16.54■□□□□ 0.24
SMARCD1-203ENST00000547247 LINC01559Q495D7 138 aa16.53■□□□□ 0.24
SMARCD1-203ENST00000547247 FAM74A3Q4VXF1 159 aa16.53■□□□□ 0.24
SMARCD1-203ENST00000547247 KRBOX1C9JBD0 128 aa16.52■□□□□ 0.24
SMARCD1-203ENST00000547247 DAZAP1Q96EP5 407 aaKnown RBP16.52■□□□□ 0.24
SMARCD1-203ENST00000547247 LY96Q9Y6Y9 160 aa16.52■□□□□ 0.24
SMARCD1-203ENST00000547247 DAD1P61803 113 aa16.51■□□□□ 0.23
SMARCD1-203ENST00000547247 OR5I1Q13606 314 aa16.51■□□□□ 0.23
SMARCD1-203ENST00000547247 C12orf74Q32Q52 190 aa16.51■□□□□ 0.23
SMARCD1-203ENST00000547247 MUC7Q8TAX7 377 aa16.51■□□□□ 0.23
SMARCD1-203ENST00000547247 SPXQ9BT56 116 aa16.51■□□□□ 0.23
SMARCD1-203ENST00000547247 K7EN84 100 aa16.5■□□□□ 0.23
SMARCD1-203ENST00000547247 DEFB130BP0DP73 79 aa16.5■□□□□ 0.23
SMARCD1-203ENST00000547247 DEFB130AP0DP74 79 aa16.5■□□□□ 0.23
SMARCD1-203ENST00000547247 SOHLH1Q5JUK2 328 aa16.5■□□□□ 0.23
SMARCD1-203ENST00000547247 TMSB15BA0A087X1C1 80 aa16.49■□□□□ 0.23
SMARCD1-203ENST00000547247 C19orf71A6NCJ1 209 aa16.49■□□□□ 0.23
SMARCD1-203ENST00000547247 S100A4P26447 101 aaKnown RBP16.49■□□□□ 0.23
SMARCD1-203ENST00000547247 ASIPP42127 132 aa16.49■□□□□ 0.23
SMARCD1-203ENST00000547247 SPINK4O60575 86 aa16.48■□□□□ 0.23
SMARCD1-203ENST00000547247 RPL19P84098 196 aaKnown RBP16.48■□□□□ 0.23
SMARCD1-203ENST00000547247 TMEM241Q24JQ0 296 aa16.48■□□□□ 0.23
SMARCD1-203ENST00000547247 Q6ZTC4 211 aa16.48■□□□□ 0.23
SMARCD1-203ENST00000547247 TRGV1A0A0A0MS02 117 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 P01737 135 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 LGALS9BQ3B8N2 356 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 DNLZQ5SXM8 178 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 Q6ZTI0 123 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 LINC01551Q86U37 167 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 LINC00612Q8N6U2 182 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 DNAH7Q8WXX0 4024 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 GAGE12BA1L429 117 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 GRIFINA4D1Z8 144 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 GAGE7O76087 117 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 GAGE12FP0CL80 117 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 GAGE12GP0CL81 117 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 GAGE12IP0CL82 117 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 RNASE3P12724 160 aaKnown RBP16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 UQCC3Q6UW78 93 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 ZNF575Q86XF7 245 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 C9orf85Q96MD7 179 aa16.47■□□□□ 0.23
SMARCD1-203ENST00000547247 SFTA3P0C7M3 94 aa16.46■□□□□ 0.23
SMARCD1-203ENST00000547247 NUDT10Q8NFP7 164 aa16.46■□□□□ 0.23
SMARCD1-203ENST00000547247 NUDT11Q96G61 164 aa16.46■□□□□ 0.23
SMARCD1-203ENST00000547247 MRPL16Q9NX20 251 aaKnown RBP16.46■□□□□ 0.23
SMARCD1-203ENST00000547247 IL36BQ9NZH7 164 aa16.46■□□□□ 0.23
SMARCD1-203ENST00000547247 NAT8Q9UHE5 227 aa16.46■□□□□ 0.23
SMARCD1-203ENST00000547247 LINC00862A6NCI5 91 aa16.45■□□□□ 0.22
SMARCD1-203ENST00000547247 M0R2P5 195 aa16.45■□□□□ 0.22
SMARCD1-203ENST00000547247 CXCL1P09341 107 aa16.45■□□□□ 0.22
SMARCD1-203ENST00000547247 COMMD7Q86VX2 200 aa16.45■□□□□ 0.22
SMARCD1-203ENST00000547247 OR2D3Q8NGH3 330 aa16.45■□□□□ 0.22
SMARCD1-203ENST00000547247 PHLDA1Q8WV24 401 aaPredicted RBP16.45■□□□□ 0.22
SMARCD1-203ENST00000547247 RNASE7Q9H1E1 156 aaKnown RBP16.44■□□□□ 0.22
SMARCD1-203ENST00000547247 TRAV10A0A0B4J240 114 aa16.43■□□□□ 0.22
SMARCD1-203ENST00000547247 C3orf84H3BNL1 204 aa16.43■□□□□ 0.22
SMARCD1-203ENST00000547247 H3BVH4 76 aa16.43■□□□□ 0.22
SMARCD1-203ENST00000547247 ARMS2P0C7Q2 107 aa16.43■□□□□ 0.22
SMARCD1-203ENST00000547247 RASL10AQ92737 203 aa16.43■□□□□ 0.22
SMARCD1-203ENST00000547247 TRGV2A0A075B6R0 118 aa16.43■□□□□ 0.22
SMARCD1-203ENST00000547247 RPS20P60866 119 aaKnown RBP16.43■□□□□ 0.22
SMARCD1-203ENST00000547247 ZFAND6Q6FIF0 208 aa16.43■□□□□ 0.22
SMARCD1-203ENST00000547247 XKRY2A2RUG3 117 aa16.42■□□□□ 0.22
SMARCD1-203ENST00000547247 ATP5G1P05496 136 aa16.42■□□□□ 0.22
SMARCD1-203ENST00000547247 ERVFC1-1P60608 527 aa16.42■□□□□ 0.22
SMARCD1-203ENST00000547247 RPL23P62829 140 aaKnown RBP16.42■□□□□ 0.22
SMARCD1-203ENST00000547247 FAM231DQ6ZW35 169 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms