RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 CEBPGP53567 150 aa11.69□□□□□ -0.54
LIMS2-217ENST00000545738 TAS2R60P59551 318 aa11.69□□□□□ -0.54
LIMS2-217ENST00000545738 RNASE8Q8TDE3 154 aaKnown RBP11.69□□□□□ -0.54
LIMS2-217ENST00000545738 CELA1Q9UNI1 258 aa11.69□□□□□ -0.54
LIMS2-217ENST00000545738 ZNF674Q2M3X9 581 aa11.68□□□□□ -0.54
LIMS2-217ENST00000545738 RRN3P1Q2M238 152 aa11.67□□□□□ -0.54
LIMS2-217ENST00000545738 ANXA2RQ3ZCQ2 193 aa11.67□□□□□ -0.54
LIMS2-217ENST00000545738 C11orf72Q8NBR9 251 aa11.67□□□□□ -0.54
LIMS2-217ENST00000545738 PYGO2Q9BRQ0 406 aa11.67□□□□□ -0.54
LIMS2-217ENST00000545738 NAGKQ9UJ70 344 aa11.67□□□□□ -0.54
LIMS2-217ENST00000545738 DYNC2H1Q8NCM8 4307 aaKnown RBP11.67□□□□□ -0.54
LIMS2-217ENST00000545738 IGHV1OR15-1A0A075B7D0 117 aa11.66□□□□□ -0.54
LIMS2-217ENST00000545738 TRAV21A0A0B4J279 112 aa11.66□□□□□ -0.54
LIMS2-217ENST00000545738 IGKV3D-20A0A0C4DH25 116 aa11.66□□□□□ -0.54
LIMS2-217ENST00000545738 LINC00587B1AMM8 73 aa11.66□□□□□ -0.54
LIMS2-217ENST00000545738 K7EN84 100 aa11.66□□□□□ -0.54
LIMS2-217ENST00000545738 SH2D1AO60880 128 aa11.66□□□□□ -0.54
LIMS2-217ENST00000545738 EMP1P54849 157 aa11.66□□□□□ -0.54
LIMS2-217ENST00000545738 RAB4BP61018 213 aa11.66□□□□□ -0.54
LIMS2-217ENST00000545738 C11orf68Q9H3H3 251 aaKnown RBP11.66□□□□□ -0.54
LIMS2-217ENST00000545738 SMIM9A6NGZ8 99 aa11.66□□□□□ -0.54
LIMS2-217ENST00000545738 GNRH2O43555 120 aa11.66□□□□□ -0.54
LIMS2-217ENST00000545738 NDUFS6O75380 124 aaKnown RBP11.66□□□□□ -0.54
LIMS2-217ENST00000545738 GNG4P50150 75 aa11.66□□□□□ -0.54
LIMS2-217ENST00000545738 LINC00467Q9BRT7 94 aa11.66□□□□□ -0.54
LIMS2-217ENST00000545738 OR5I1Q13606 314 aa11.65□□□□□ -0.54
LIMS2-217ENST00000545738 TDRG1Q3Y452 100 aa11.65□□□□□ -0.54
LIMS2-217ENST00000545738 PRR27Q6MZM9 219 aa11.65□□□□□ -0.54
LIMS2-217ENST00000545738 OCC1Q8TAD7 63 aa11.65□□□□□ -0.54
LIMS2-217ENST00000545738 MDFICQ9P1T7 246 aa11.65□□□□□ -0.54
LIMS2-217ENST00000545738 CBY3A6NI87 242 aa11.64□□□□□ -0.55
LIMS2-217ENST00000545738 C9JCJ5 164 aa11.64□□□□□ -0.55
LIMS2-217ENST00000545738 TYMSP04818 313 aa11.64□□□□□ -0.55
LIMS2-217ENST00000545738 PEA15Q15121 130 aa11.64□□□□□ -0.55
LIMS2-217ENST00000545738 IL17DQ8TAD2 202 aa11.64□□□□□ -0.55
LIMS2-217ENST00000545738 TMEM263Q8WUH6 116 aaKnown RBP11.64□□□□□ -0.55
LIMS2-217ENST00000545738 FABP5P3A8MUU1 101 aa11.63□□□□□ -0.55
LIMS2-217ENST00000545738 RPL19P84098 196 aaKnown RBP11.63□□□□□ -0.55
LIMS2-217ENST00000545738 FAM162BQ5T6X4 162 aa11.63□□□□□ -0.55
LIMS2-217ENST00000545738 SMIM7Q9BQ49 75 aa11.63□□□□□ -0.55
LIMS2-217ENST00000545738 GSN-AS1Q9NRJ2 163 aa11.63□□□□□ -0.55
LIMS2-217ENST00000545738 PLECQ15149 4684 aaKnown RBP11.63□□□□□ -0.55
LIMS2-217ENST00000545738 MUC4Q99102 2169 aa11.63□□□□□ -0.55
LIMS2-217ENST00000545738 LYSTQ99698 3801 aa11.63□□□□□ -0.55
LIMS2-217ENST00000545738 M0R036 132 aa11.63□□□□□ -0.55
LIMS2-217ENST00000545738 MGST1P10620 155 aaKnown RBP11.63□□□□□ -0.55
LIMS2-217ENST00000545738 FAM159AQ6UWV7 190 aa11.63□□□□□ -0.55
LIMS2-217ENST00000545738 CBY1Q9Y3M2 126 aa11.63□□□□□ -0.55
LIMS2-217ENST00000545738 C19orf71A6NCJ1 209 aa11.62□□□□□ -0.55
LIMS2-217ENST00000545738 FAM222AQ5U5X8 452 aa11.62□□□□□ -0.55
LIMS2-217ENST00000545738 C16orf74Q96GX8 76 aa11.62□□□□□ -0.55
LIMS2-217ENST00000545738 SMDT1Q9H4I9 107 aa11.62□□□□□ -0.55
LIMS2-217ENST00000545738 DKK2Q9UBU2 259 aa11.62□□□□□ -0.55
LIMS2-217ENST00000545738 IGHV3-16A0A0C4DH30 117 aa11.61□□□□□ -0.55
LIMS2-217ENST00000545738 ZNF727A8MUV8 499 aa11.61□□□□□ -0.55
LIMS2-217ENST00000545738 NOP10Q9NPE3 64 aaKnown RBP11.61□□□□□ -0.55
LIMS2-217ENST00000545738 NANOS2P60321 138 aaKnown RBP11.6□□□□□ -0.55
LIMS2-217ENST00000545738 LINC01559Q495D7 138 aa11.6□□□□□ -0.55
LIMS2-217ENST00000545738 LINC01551Q86U37 167 aa11.6□□□□□ -0.55
LIMS2-217ENST00000545738 SMIM12Q96EX1 92 aa11.6□□□□□ -0.55
LIMS2-217ENST00000545738 TMSB15BA0A087X1C1 80 aa11.6□□□□□ -0.55
LIMS2-217ENST00000545738 ORM1P02763 201 aa11.6□□□□□ -0.55
LIMS2-217ENST00000545738 SFTA3P0C7M3 94 aa11.6□□□□□ -0.55
LIMS2-217ENST00000545738 RNASE3P12724 160 aaKnown RBP11.6□□□□□ -0.55
LIMS2-217ENST00000545738 ADCYAP1P18509 176 aa11.6□□□□□ -0.55
LIMS2-217ENST00000545738 ZNF493Q6ZR52 646 aa11.6□□□□□ -0.55
LIMS2-217ENST00000545738 RNASE7Q9H1E1 156 aaKnown RBP11.6□□□□□ -0.55
LIMS2-217ENST00000545738 GRIFINA4D1Z8 144 aa11.59□□□□□ -0.55
LIMS2-217ENST00000545738 TCL1AP56279 114 aa11.59□□□□□ -0.55
LIMS2-217ENST00000545738 IBA57Q5T440 356 aaKnown RBP11.59□□□□□ -0.55
LIMS2-217ENST00000545738 SDF2L1Q9HCN8 221 aa11.59□□□□□ -0.55
LIMS2-217ENST00000545738 B4DEV8 164 aa11.58□□□□□ -0.56
LIMS2-217ENST00000545738 C12orf74Q32Q52 190 aa11.58□□□□□ -0.56
LIMS2-217ENST00000545738 TIMM8BQ9Y5J9 83 aaPredicted RBP11.58□□□□□ -0.56
LIMS2-217ENST00000545738 TMEM189A5PLL7 270 aa11.57□□□□□ -0.56
LIMS2-217ENST00000545738 RNF212Q495C1 297 aa11.57□□□□□ -0.56
LIMS2-217ENST00000545738 SOHLH1Q5JUK2 328 aa11.57□□□□□ -0.56
LIMS2-217ENST00000545738 Q6ZTI0 123 aa11.57□□□□□ -0.56
LIMS2-217ENST00000545738 KCNS1Q96KK3 526 aa11.57□□□□□ -0.56
LIMS2-217ENST00000545738 TENM2Q9NT68 2774 aa11.57□□□□□ -0.56
LIMS2-217ENST00000545738 GZMBP10144 247 aa11.57□□□□□ -0.56
LIMS2-217ENST00000545738 RPL23P62829 140 aaKnown RBP11.57□□□□□ -0.56
LIMS2-217ENST00000545738 DAZ2Q13117 558 aaKnown RBP11.57□□□□□ -0.56
LIMS2-217ENST00000545738 LBHQ53QV2 105 aaPredicted RBP11.57□□□□□ -0.56
LIMS2-217ENST00000545738 Q6ZTC4 211 aa11.57□□□□□ -0.56
LIMS2-217ENST00000545738 NUDT10Q8NFP7 164 aa11.57□□□□□ -0.56
LIMS2-217ENST00000545738 C11orf45Q8TAV5 145 aa11.57□□□□□ -0.56
LIMS2-217ENST00000545738 NUDT11Q96G61 164 aa11.57□□□□□ -0.56
LIMS2-217ENST00000545738 C9orf85Q96MD7 179 aa11.57□□□□□ -0.56
LIMS2-217ENST00000545738 LY96Q9Y6Y9 160 aa11.57□□□□□ -0.56
LIMS2-217ENST00000545738 TRGV11A0A075B6L2 103 aa11.56□□□□□ -0.56
LIMS2-217ENST00000545738 LINC00612Q8N6U2 182 aa11.56□□□□□ -0.56
LIMS2-217ENST00000545738 MRPL16Q9NX20 251 aaKnown RBP11.56□□□□□ -0.56
LIMS2-217ENST00000545738 NACAE9PAV3 2078 aa11.55□□□□□ -0.56
LIMS2-217ENST00000545738 SNURFLB1AK76 121 aa11.55□□□□□ -0.56
LIMS2-217ENST00000545738 H3BVH4 76 aa11.55□□□□□ -0.56
LIMS2-217ENST00000545738 SPINK4O60575 86 aa11.55□□□□□ -0.56
LIMS2-217ENST00000545738 SPART-AS1P0CW21 52 aa11.55□□□□□ -0.56
LIMS2-217ENST00000545738 ZNF415Q09FC8 603 aa11.55□□□□□ -0.56
LIMS2-217ENST00000545738 TMEM241Q24JQ0 296 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms