RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SMIM7Q9BQ49 75 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 PLAC8L1A1L4L8 177 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 C9JCJ5 164 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 GNRH2O43555 120 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 ZNF415Q09FC8 603 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 TDRG1Q3Y452 100 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 FAM222AQ5U5X8 452 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 IL17DQ8TAD2 202 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 NOP10Q9NPE3 64 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 GSN-AS1Q9NRJ2 163 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 C11orf21Q9P2W6 132 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 CELA1Q9UNI1 258 aa10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 TIMM8BQ9Y5J9 83 aaPredicted RBP10.38□□□□□ -0.75
TNFRSF1A-216ENST00000543995 TEX48A0A1B0GUV7 120 aa10.37□□□□□ -0.75
TNFRSF1A-216ENST00000543995 ZNF727A8MUV8 499 aa10.37□□□□□ -0.75
TNFRSF1A-216ENST00000543995 M0R036 132 aa10.37□□□□□ -0.75
TNFRSF1A-216ENST00000543995 IGLV2-8P01709 118 aa10.37□□□□□ -0.75
TNFRSF1A-216ENST00000543995 TYMSP04818 313 aa10.37□□□□□ -0.75
TNFRSF1A-216ENST00000543995 IBA57Q5T440 356 aaKnown RBP10.37□□□□□ -0.75
TNFRSF1A-216ENST00000543995 BIN3Q9NQY0 253 aa10.37□□□□□ -0.75
TNFRSF1A-216ENST00000543995 DKK2Q9UBU2 259 aa10.37□□□□□ -0.75
TNFRSF1A-216ENST00000543995 IGKV3D-20A0A0C4DH25 116 aa10.36□□□□□ -0.75
TNFRSF1A-216ENST00000543995 LINC00862A6NCI5 91 aa10.36□□□□□ -0.75
TNFRSF1A-216ENST00000543995 LYRM9A8MSI8 78 aa10.36□□□□□ -0.75
TNFRSF1A-216ENST00000543995 B4DEV8 164 aa10.36□□□□□ -0.75
TNFRSF1A-216ENST00000543995 C9JQL5 133 aa10.36□□□□□ -0.75
TNFRSF1A-216ENST00000543995 OR5I1Q13606 314 aa10.36□□□□□ -0.75
TNFRSF1A-216ENST00000543995 C11orf72Q8NBR9 251 aa10.36□□□□□ -0.75
TNFRSF1A-216ENST00000543995 DAZAP1Q96EP5 407 aaKnown RBP10.36□□□□□ -0.75
TNFRSF1A-216ENST00000543995 MDFICQ9P1T7 246 aa10.36□□□□□ -0.75
TNFRSF1A-216ENST00000543995 TGP01266 2768 aa10.35□□□□□ -0.75
TNFRSF1A-216ENST00000543995 NANOS2P60321 138 aaKnown RBP10.35□□□□□ -0.75
TNFRSF1A-216ENST00000543995 OCC1Q8TAD7 63 aa10.35□□□□□ -0.75
TNFRSF1A-216ENST00000543995 TMSB15BA0A087X1C1 80 aa10.34□□□□□ -0.75
TNFRSF1A-216ENST00000543995 IGHV3-16A0A0C4DH30 117 aa10.34□□□□□ -0.75
TNFRSF1A-216ENST00000543995 DEFB130BP0DP73 79 aa10.34□□□□□ -0.75
TNFRSF1A-216ENST00000543995 DEFB130AP0DP74 79 aa10.34□□□□□ -0.75
TNFRSF1A-216ENST00000543995 S100A4P26447 101 aaKnown RBP10.34□□□□□ -0.75
TNFRSF1A-216ENST00000543995 TCL1AP56279 114 aa10.34□□□□□ -0.75
TNFRSF1A-216ENST00000543995 DAZ2Q13117 558 aaKnown RBP10.34□□□□□ -0.75
TNFRSF1A-216ENST00000543995 LINC01559Q495D7 138 aa10.34□□□□□ -0.75
TNFRSF1A-216ENST00000543995 FAM74A3Q4VXF1 159 aa10.34□□□□□ -0.75
TNFRSF1A-216ENST00000543995 KRBOX1C9JBD0 128 aa10.33□□□□□ -0.76
TNFRSF1A-216ENST00000543995 DAD1P61803 113 aa10.33□□□□□ -0.76
TNFRSF1A-216ENST00000543995 SOHLH1Q5JUK2 328 aa10.33□□□□□ -0.76
TNFRSF1A-216ENST00000543995 COMMD7Q86VX2 200 aa10.33□□□□□ -0.76
TNFRSF1A-216ENST00000543995 TRGV1A0A0A0MS02 117 aa10.33□□□□□ -0.76
TNFRSF1A-216ENST00000543995 K7EN84 100 aa10.33□□□□□ -0.76
TNFRSF1A-216ENST00000543995 P01737 135 aa10.33□□□□□ -0.76
TNFRSF1A-216ENST00000543995 ASIPP42127 132 aa10.33□□□□□ -0.76
TNFRSF1A-216ENST00000543995 RPL19P84098 196 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-216ENST00000543995 C12orf74Q32Q52 190 aa10.33□□□□□ -0.76
TNFRSF1A-216ENST00000543995 MUC7Q8TAX7 377 aa10.33□□□□□ -0.76
TNFRSF1A-216ENST00000543995 SPXQ9BT56 116 aa10.33□□□□□ -0.76
TNFRSF1A-216ENST00000543995 LY96Q9Y6Y9 160 aa10.33□□□□□ -0.76
TNFRSF1A-216ENST00000543995 GAGE12BA1L429 117 aa10.32□□□□□ -0.76
TNFRSF1A-216ENST00000543995 GRIFINA4D1Z8 144 aa10.32□□□□□ -0.76
TNFRSF1A-216ENST00000543995 GAGE7O76087 117 aa10.32□□□□□ -0.76
TNFRSF1A-216ENST00000543995 SFTA3P0C7M3 94 aa10.32□□□□□ -0.76
TNFRSF1A-216ENST00000543995 GAGE12FP0CL80 117 aa10.32□□□□□ -0.76
TNFRSF1A-216ENST00000543995 GAGE12GP0CL81 117 aa10.32□□□□□ -0.76
TNFRSF1A-216ENST00000543995 GAGE12IP0CL82 117 aa10.32□□□□□ -0.76
TNFRSF1A-216ENST00000543995 TMEM241Q24JQ0 296 aa10.32□□□□□ -0.76
TNFRSF1A-216ENST00000543995 Q6ZTC4 211 aa10.32□□□□□ -0.76
TNFRSF1A-216ENST00000543995 C19orf71A6NCJ1 209 aa10.31□□□□□ -0.76
TNFRSF1A-216ENST00000543995 SPINK4O60575 86 aa10.31□□□□□ -0.76
TNFRSF1A-216ENST00000543995 UQCC3Q6UW78 93 aa10.31□□□□□ -0.76
TNFRSF1A-216ENST00000543995 Q6ZTI0 123 aa10.31□□□□□ -0.76
TNFRSF1A-216ENST00000543995 LINC01551Q86U37 167 aa10.31□□□□□ -0.76
TNFRSF1A-216ENST00000543995 MRPL16Q9NX20 251 aaKnown RBP10.31□□□□□ -0.76
TNFRSF1A-216ENST00000543995 NAT8Q9UHE5 227 aa10.31□□□□□ -0.76
TNFRSF1A-216ENST00000543995 TRGV2A0A075B6R0 118 aa10.3□□□□□ -0.76
TNFRSF1A-216ENST00000543995 M0R2P5 195 aa10.3□□□□□ -0.76
TNFRSF1A-216ENST00000543995 LGALS9BQ3B8N2 356 aa10.3□□□□□ -0.76
TNFRSF1A-216ENST00000543995 SLC7A5P1Q8MH63 180 aa10.3□□□□□ -0.76
TNFRSF1A-216ENST00000543995 NUDT10Q8NFP7 164 aa10.3□□□□□ -0.76
TNFRSF1A-216ENST00000543995 OR2D3Q8NGH3 330 aa10.3□□□□□ -0.76
TNFRSF1A-216ENST00000543995 NUDT11Q96G61 164 aa10.3□□□□□ -0.76
TNFRSF1A-216ENST00000543995 RNASE7Q9H1E1 156 aaKnown RBP10.3□□□□□ -0.76
TNFRSF1A-216ENST00000543995 H3BVH4 76 aa10.29□□□□□ -0.76
TNFRSF1A-216ENST00000543995 RNASE3P12724 160 aaKnown RBP10.29□□□□□ -0.76
TNFRSF1A-216ENST00000543995 HTN3P15516 51 aa10.29□□□□□ -0.76
TNFRSF1A-216ENST00000543995 ERVFC1-1P60608 527 aa10.29□□□□□ -0.76
TNFRSF1A-216ENST00000543995 ZFAND6Q6FIF0 208 aa10.29□□□□□ -0.76
TNFRSF1A-216ENST00000543995 PHLDA1Q8WV24 401 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF1A-216ENST00000543995 C9orf85Q96MD7 179 aa10.29□□□□□ -0.76
TNFRSF1A-216ENST00000543995 IL36BQ9NZH7 164 aa10.29□□□□□ -0.76
TNFRSF1A-216ENST00000543995 XKRY2A2RUG3 117 aa10.28□□□□□ -0.76
TNFRSF1A-216ENST00000543995 ARMS2P0C7Q2 107 aa10.28□□□□□ -0.76
TNFRSF1A-216ENST00000543995 RPS20P60866 119 aaKnown RBP10.28□□□□□ -0.76
TNFRSF1A-216ENST00000543995 ADIRFQ15847 76 aa10.28□□□□□ -0.76
TNFRSF1A-216ENST00000543995 DNLZQ5SXM8 178 aa10.28□□□□□ -0.76
TNFRSF1A-216ENST00000543995 STAB2Q8WWQ8 2551 aa10.28□□□□□ -0.76
TNFRSF1A-216ENST00000543995 TRAV10A0A0B4J240 114 aa10.28□□□□□ -0.76
TNFRSF1A-216ENST00000543995 CXCL1P09341 107 aa10.28□□□□□ -0.76
TNFRSF1A-216ENST00000543995 RPL23P62829 140 aaKnown RBP10.28□□□□□ -0.76
TNFRSF1A-216ENST00000543995 LINC00612Q8N6U2 182 aa10.28□□□□□ -0.76
TNFRSF1A-216ENST00000543995 RPP21Q9H633 154 aaKnown RBP10.28□□□□□ -0.76
TNFRSF1A-216ENST00000543995 PHLDA3Q9Y5J5 127 aa10.28□□□□□ -0.76
TNFRSF1A-216ENST00000543995 DEFB131BA0A096LNP1 70 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms