RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 LINC00311Q8N616 119 aa9.79□□□□□ -0.84
SMG8-202ENST00000543872 RNF182Q8N6D2 247 aa9.79□□□□□ -0.84
SMG8-202ENST00000543872 OR11H6Q8NGC7 330 aa9.79□□□□□ -0.84
SMG8-202ENST00000543872 IGHV3-66A0A0C4DH42 116 aa9.79□□□□□ -0.84
SMG8-202ENST00000543872 LINC01546A6NGU7 62 aa9.79□□□□□ -0.84
SMG8-202ENST00000543872 CRYGBP07316 175 aa9.79□□□□□ -0.84
SMG8-202ENST00000543872 LYRM7Q5U5X0 104 aa9.79□□□□□ -0.84
SMG8-202ENST00000543872 TMEM262E9PQX1 116 aa9.79□□□□□ -0.84
SMG8-202ENST00000543872 RPL7P18124 248 aaKnown RBP9.79□□□□□ -0.84
SMG8-202ENST00000543872 LOXP28300 417 aaPredicted RBP9.79□□□□□ -0.84
SMG8-202ENST00000543872 C5orf47Q569G3 176 aa9.79□□□□□ -0.84
SMG8-202ENST00000543872 IGHG3P01860 377 aa9.78□□□□□ -0.84
SMG8-202ENST00000543872 CD40P25942 277 aa9.78□□□□□ -0.84
SMG8-202ENST00000543872 NRACQ8N912 160 aa9.78□□□□□ -0.84
SMG8-202ENST00000543872 Q6ZS92 163 aa9.78□□□□□ -0.84
SMG8-202ENST00000543872 FDCSPQ8NFU4 85 aa9.78□□□□□ -0.84
SMG8-202ENST00000543872 SPENQ96T58 3664 aaKnown RBP9.78□□□□□ -0.84
SMG8-202ENST00000543872 ARHGAP32A7KAX9 2087 aa9.78□□□□□ -0.84
SMG8-202ENST00000543872 UBE2D1P51668 147 aa9.77□□□□□ -0.84
SMG8-202ENST00000543872 UBE2D3P61077 147 aa9.77□□□□□ -0.84
SMG8-202ENST00000543872 UBE2D2P62837 147 aa9.77□□□□□ -0.84
SMG8-202ENST00000543872 NDUFA11Q86Y39 141 aa9.77□□□□□ -0.84
SMG8-202ENST00000543872 C11orf21Q9P2W6 132 aa9.77□□□□□ -0.84
SMG8-202ENST00000543872 IGKV3D-20A0A0C4DH25 116 aa9.77□□□□□ -0.85
SMG8-202ENST00000543872 CRIP2P52943 208 aaPredicted RBP9.77□□□□□ -0.85
SMG8-202ENST00000543872 TRPT1Q86TN4 253 aaKnown RBP9.77□□□□□ -0.85
SMG8-202ENST00000543872 VCX2Q9H322 139 aa9.77□□□□□ -0.85
SMG8-202ENST00000543872 ADGRG4Q8IZF6 3080 aa9.77□□□□□ -0.85
SMG8-202ENST00000543872 SLC25A20O43772 301 aa9.77□□□□□ -0.85
SMG8-202ENST00000543872 MFAP4P55083 255 aa9.76□□□□□ -0.85
SMG8-202ENST00000543872 SEM1Q6ZVN7 128 aa9.76□□□□□ -0.85
SMG8-202ENST00000543872 LOC107984640A0A0U1RRK4 108 aa9.76□□□□□ -0.85
SMG8-202ENST00000543872 HES1Q14469 280 aa9.76□□□□□ -0.85
SMG8-202ENST00000543872 BEX4Q9NWD9 120 aaPredicted RBP9.76□□□□□ -0.85
SMG8-202ENST00000543872 C17orf100A8MU93 164 aa9.76□□□□□ -0.85
SMG8-202ENST00000543872 IGHG4P01861 327 aa9.76□□□□□ -0.85
SMG8-202ENST00000543872 CD7P09564 240 aa9.76□□□□□ -0.85
SMG8-202ENST00000543872 CNFNQ9BYD5 112 aa9.76□□□□□ -0.85
SMG8-202ENST00000543872 SMAD5-AS1Q9Y6J3 95 aa9.76□□□□□ -0.85
SMG8-202ENST00000543872 IGHV3-49A0A0A0MS15 119 aa9.75□□□□□ -0.85
SMG8-202ENST00000543872 TMEM178BH3BS89 294 aa9.75□□□□□ -0.85
SMG8-202ENST00000543872 TMEM155Q4W5P6 130 aa9.75□□□□□ -0.85
SMG8-202ENST00000543872 DEFB123Q8N688 67 aa9.75□□□□□ -0.85
SMG8-202ENST00000543872 NTN5Q8WTR8 489 aaPredicted RBP9.75□□□□□ -0.85
SMG8-202ENST00000543872 SMIM2Q9BVW6 85 aa9.75□□□□□ -0.85
SMG8-202ENST00000543872 SPTBN1Q01082 2364 aaKnown RBP9.75□□□□□ -0.85
SMG8-202ENST00000543872 M0R381 172 aa9.75□□□□□ -0.85
SMG8-202ENST00000543872 MRPL23Q16540 153 aaKnown RBP9.75□□□□□ -0.85
SMG8-202ENST00000543872 NRGNQ92686 78 aa9.75□□□□□ -0.85
SMG8-202ENST00000543872 RASL10AQ92737 203 aa9.75□□□□□ -0.85
SMG8-202ENST00000543872 MUC3AQ02505 3323 aa9.75□□□□□ -0.85
SMG8-202ENST00000543872 CFC1BP0CG36 223 aa9.75□□□□□ -0.85
SMG8-202ENST00000543872 CFC1P0CG37 223 aa9.75□□□□□ -0.85
SMG8-202ENST00000543872 Q6ZS46 218 aa9.75□□□□□ -0.85
SMG8-202ENST00000543872 LINC01619G3V211 115 aa9.74□□□□□ -0.85
SMG8-202ENST00000543872 C2orf66Q6UXQ4 117 aa9.74□□□□□ -0.85
SMG8-202ENST00000543872 RPL39LQ96EH5 51 aaKnown RBP9.74□□□□□ -0.85
SMG8-202ENST00000543872 TRAV12-1A0A0B4J245 112 aa9.74□□□□□ -0.85
SMG8-202ENST00000543872 BUB1B-PAK6H3BSN5 160 aa9.74□□□□□ -0.85
SMG8-202ENST00000543872 DLX6P56179 175 aa9.74□□□□□ -0.85
SMG8-202ENST00000543872 NEXN-AS1Q8NBZ9 246 aa9.74□□□□□ -0.85
SMG8-202ENST00000543872 BAALCQ8WXS3 180 aa9.74□□□□□ -0.85
SMG8-202ENST00000543872 TIMM23O14925 209 aa9.73□□□□□ -0.85
SMG8-202ENST00000543872 MGPP08493 103 aa9.73□□□□□ -0.85
SMG8-202ENST00000543872 Q1RN00 199 aa9.73□□□□□ -0.85
SMG8-202ENST00000543872 PIP4P1Q86T03 277 aa9.73□□□□□ -0.85
SMG8-202ENST00000543872 C21orf62Q9NYP8 219 aa9.73□□□□□ -0.85
SMG8-202ENST00000543872 IGHV4-39P01824 125 aa9.73□□□□□ -0.85
SMG8-202ENST00000543872 LINC00694P0DN24 101 aa9.73□□□□□ -0.85
SMG8-202ENST00000543872 COX8CQ7Z4L0 72 aa9.73□□□□□ -0.85
SMG8-202ENST00000543872 TMEM170BQ5T4T1 132 aa9.72□□□□□ -0.85
SMG8-202ENST00000543872 C10orf126Q8N4M7 172 aa9.72□□□□□ -0.85
SMG8-202ENST00000543872 AGPAT4-IT1Q9H0P7 198 aa9.72□□□□□ -0.85
SMG8-202ENST00000543872 PRO1854Q9UHT4 67 aa9.72□□□□□ -0.85
SMG8-202ENST00000543872 A0A0J9YY99 117 aa9.72□□□□□ -0.85
SMG8-202ENST00000543872 ORMDL2Q53FV1 153 aa9.72□□□□□ -0.85
SMG8-202ENST00000543872 C8orf31Q8N9H6 132 aa9.72□□□□□ -0.85
SMG8-202ENST00000543872 A4D1N5 150 aa9.72□□□□□ -0.85
SMG8-202ENST00000543872 LYNX1G3V0Z9 82 aa9.72□□□□□ -0.85
SMG8-202ENST00000543872 LYNX1P0DP58 116 aa9.72□□□□□ -0.85
SMG8-202ENST00000543872 SUMO2P61956 95 aaKnown RBP9.72□□□□□ -0.85
SMG8-202ENST00000543872 C14orf178Q8N769 122 aaPredicted RBP9.72□□□□□ -0.85
SMG8-202ENST00000543872 C15orf53Q8NAA6 179 aa9.72□□□□□ -0.85
SMG8-202ENST00000543872 CHCHD5Q9BSY4 110 aa9.72□□□□□ -0.85
SMG8-202ENST00000543872 SMIM9A6NGZ8 99 aa9.71□□□□□ -0.85
SMG8-202ENST00000543872 C11orf86A6NJI1 115 aa9.71□□□□□ -0.85
SMG8-202ENST00000543872 ADIPOQQ15848 244 aa9.71□□□□□ -0.85
SMG8-202ENST00000543872 Q8N1Y9 231 aa9.71□□□□□ -0.85
SMG8-202ENST00000543872 TMEM190Q8WZ59 177 aa9.71□□□□□ -0.85
SMG8-202ENST00000543872 UBTD1Q9HAC8 227 aa9.71□□□□□ -0.85
SMG8-202ENST00000543872 FANCD2OSQ96PS1 177 aa9.71□□□□□ -0.86
SMG8-202ENST00000543872 EP300Q09472 2414 aaPredicted RBP9.71□□□□□ -0.86
SMG8-202ENST00000543872 TRAV17A0A0B4J275 112 aa9.7□□□□□ -0.86
SMG8-202ENST00000543872 IGLV1-47P01700 117 aa9.7□□□□□ -0.86
SMG8-202ENST00000543872 TOMM6Q96B49 74 aa9.7□□□□□ -0.86
SMG8-202ENST00000543872 ARRDC1-AS1Q9H2J1 176 aa9.7□□□□□ -0.86
SMG8-202ENST00000543872 DYNLRB1Q9NP97 96 aa9.7□□□□□ -0.86
SMG8-202ENST00000543872 TRAV25A0A0B4J276 109 aa9.7□□□□□ -0.86
SMG8-202ENST00000543872 TEX49A0A1B0GTD5 131 aa9.7□□□□□ -0.86
SMG8-202ENST00000543872 DUSP14O95147 198 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms