RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 GRAMD2BQ96HH9 432 aa6.62□□□□□ -1.35
THBS3-210ENST00000541576 UFC1Q9Y3C8 167 aa6.62□□□□□ -1.35
THBS3-210ENST00000541576 K7EMT4 169 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 HAX1O00165 279 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 HOXD3P31249 432 aaPredicted RBP6.61□□□□□ -1.35
THBS3-210ENST00000541576 OR10J3Q5JRS4 329 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 AAMDCQ9H7C9 122 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 IGHV7-4-1A0A0J9YVY3 117 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 LOC389332A0A1B0GUA5 103 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 MT-ND6P03923 174 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 DEFB136Q30KP8 78 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 HIST2H2BDQ6DRA6 164 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 C11orf44Q8N8P7 122 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 KLHL30-AS1Q8NEE0 82 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 OR8A1Q8NGG7 326 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 GLMPQ8WWB7 406 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 C9JCJ5 164 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 TCRAP04437 139 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 NUP35Q8NFH5 326 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 RHPN1-AS1Q9BWJ2 59 aa6.61□□□□□ -1.35
THBS3-210ENST00000541576 ISLRO14498 428 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 CD28P10747 220 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 ESDP10768 282 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 SYNJ2BPP57105 145 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 SRSF2Q01130 221 aaKnown RBP6.6□□□□□ -1.35
THBS3-210ENST00000541576 OR11H1Q8NG94 326 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 MAST4O15021 2626 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 LINC01619G3V211 115 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 M0R3E3 92 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 LGALS9O00182 355 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 IGLV2-8P01709 118 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 IGFL4Q6B9Z1 124 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 DPF1Q92782 380 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 IGF2BP2-AS1Q96M15 143 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 SMPXQ9UHP9 88 aa6.6□□□□□ -1.35
THBS3-210ENST00000541576 TMEM213A2RRL7 107 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 CYSRT1A8MQ03 144 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 CHEK1O14757 476 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 EDN2P20800 178 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 SLC50A1Q9BRV3 221 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 KLF12Q9Y4X4 402 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 WNK1Q9H4A3 2382 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 C2orf70A6NJV1 201 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 BMI1P35226 326 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 CSN1S1P47710 185 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 SLURP1P55000 103 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 PROK1P58294 105 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 C8orf86Q6ZUL3 223 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 GOLT1AQ6ZVE7 132 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 FER1L6-AS1Q8NA97 138 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 LY96Q9Y6Y9 160 aa6.59□□□□□ -1.35
THBS3-210ENST00000541576 TRAV8-1A0A0A6YYK1 113 aa6.59□□□□□ -1.36
THBS3-210ENST00000541576 CIDEAO60543 219 aa6.59□□□□□ -1.36
THBS3-210ENST00000541576 HLA-DMBP28068 263 aa6.59□□□□□ -1.36
THBS3-210ENST00000541576 KLF5Q13887 457 aaPredicted RBP6.59□□□□□ -1.36
THBS3-210ENST00000541576 FMC1Q96HJ9 113 aa6.59□□□□□ -1.36
THBS3-210ENST00000541576 CITED2Q99967 270 aaPredicted RBP6.59□□□□□ -1.36
THBS3-210ENST00000541576 TSSC4Q9Y5U2 329 aaPredicted RBP6.59□□□□□ -1.36
THBS3-210ENST00000541576 A0A1W2PRX2 142 aa6.58□□□□□ -1.36
THBS3-210ENST00000541576 IZUMO1RA6ND01 250 aa6.58□□□□□ -1.36
THBS3-210ENST00000541576 SYS1-DBNDD2H3BUS1 97 aa6.58□□□□□ -1.36
THBS3-210ENST00000541576 K7EQM0 130 aa6.58□□□□□ -1.36
THBS3-210ENST00000541576 NMUP48645 174 aa6.58□□□□□ -1.36
THBS3-210ENST00000541576 RPL11P62913 178 aaKnown RBP6.58□□□□□ -1.36
THBS3-210ENST00000541576 C12orf54Q6X4T0 127 aa6.58□□□□□ -1.36
THBS3-210ENST00000541576 DUX3Q96PT4 197 aa6.58□□□□□ -1.36
THBS3-210ENST00000541576 TMEM191AQ9H0A3 160 aa6.58□□□□□ -1.36
THBS3-210ENST00000541576 IGHV1-24A0A0C4DH33 117 aa6.58□□□□□ -1.36
THBS3-210ENST00000541576 IGLV2-11P01706 119 aa6.58□□□□□ -1.36
THBS3-210ENST00000541576 SMIM12Q96EX1 92 aa6.58□□□□□ -1.36
THBS3-210ENST00000541576 TMSB15BA0A087X1C1 80 aa6.57□□□□□ -1.36
THBS3-210ENST00000541576 SERTM2A0A1B0GWG4 89 aa6.57□□□□□ -1.36
THBS3-210ENST00000541576 OR5AL1P0C617 328 aa6.57□□□□□ -1.36
THBS3-210ENST00000541576 SAMD13Q5VXD3 122 aa6.57□□□□□ -1.36
THBS3-210ENST00000541576 DEFB125Q8N687 156 aa6.57□□□□□ -1.36
THBS3-210ENST00000541576 RNF182Q8N6D2 247 aa6.57□□□□□ -1.36
THBS3-210ENST00000541576 C16orf92Q96LL3 132 aa6.57□□□□□ -1.36
THBS3-210ENST00000541576 MAP1LC3CQ9BXW4 147 aa6.57□□□□□ -1.36
THBS3-210ENST00000541576 TRAV8-2A0A0B4J237 113 aa6.57□□□□□ -1.36
THBS3-210ENST00000541576 TMEM75Q8N9X5 138 aa6.57□□□□□ -1.36
THBS3-210ENST00000541576 RAX2Q96IS3 184 aa6.57□□□□□ -1.36
THBS3-210ENST00000541576 OSTCQ9NRP0 149 aa6.57□□□□□ -1.36
THBS3-210ENST00000541576 ATRQ13535 2644 aa6.57□□□□□ -1.36
THBS3-210ENST00000541576 IGKV3-7A0A075B6H7 116 aa6.56□□□□□ -1.36
THBS3-210ENST00000541576 Q86TA4 180 aa6.56□□□□□ -1.36
THBS3-210ENST00000541576 PEMTQ9UBM1 199 aa6.56□□□□□ -1.36
THBS3-210ENST00000541576 NCR2O95944 276 aa6.56□□□□□ -1.36
THBS3-210ENST00000541576 LTAP01374 205 aa6.56□□□□□ -1.36
THBS3-210ENST00000541576 PSG3Q16557 428 aa6.56□□□□□ -1.36
THBS3-210ENST00000541576 PRNTQ86SH4 94 aa6.56□□□□□ -1.36
THBS3-210ENST00000541576 OR9G4Q8NGQ1 327 aa6.56□□□□□ -1.36
THBS3-210ENST00000541576 DLX4Q92988 240 aaPredicted RBP6.56□□□□□ -1.36
THBS3-210ENST00000541576 DAZAP1Q96EP5 407 aaKnown RBP6.56□□□□□ -1.36
THBS3-210ENST00000541576 MLST8Q9BVC4 326 aa6.56□□□□□ -1.36
THBS3-210ENST00000541576 TTTY13Q9BZ97 58 aa6.56□□□□□ -1.36
THBS3-210ENST00000541576 IGKV2-40A0A087WW87 121 aaPredicted RBP6.55□□□□□ -1.36
THBS3-210ENST00000541576 PRAC2D3DTV9 90 aa6.55□□□□□ -1.36
THBS3-210ENST00000541576 CCL24O00175 119 aa6.55□□□□□ -1.36
THBS3-210ENST00000541576 IGKV2D-40P01614 121 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms